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(-) Description

Title :  CRYSTAL STRUCTURE OF A COMPLEX OF THE MIZ1- AND NAC1 POZ DOMAINS.
 
Authors :  M. A. Stead, S. C. Wright
Date :  17 Jul 14  (Deposition) - 10 Dec 14  (Release) - 17 Dec 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Poz Domain, Btb Domain, Transcription (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. A. Stead, S. C. Wright
Structures Of Heterodimeric Poz Domains Of Miz1/Bcl6 And Miz1/Nac1.
Acta Crystallogr. , Sect. F V. 70 1591 2014
PubMed-ID: 25484205  |  Reference-DOI: 10.1107/S2053230X14023449

(-) Compounds

Molecule 1 - ZINC FINGER AND BTB DOMAIN-CONTAINING PROTEIN 17,NUCLEUS ACCUMBENS-ASSOCIATED PROTEIN 1
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PGEX-6P-1
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 2-115,UNP RESIDUES 2-125
    Gene: ZBTB17, MIZ1, ZNF151, ZNF60, NACC1, BTBD14B, NAC1
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: MYC-INTERACTING ZINC FINGER PROTEIN 1,MIZ-1,ZINC FINGER PROTEIN 151,ZINC FINGER PROTEIN 60,NAC-1,BTB/POZ DOMAIN-CONTAINING PROTEIN 14B

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4U2N)

(-) Sites  (0, 0)

(no "Site" information available for 4U2N)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4U2N)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4U2N)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4U2N)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4U2N)

(-) Exons   (0, 0)

(no "Exon" information available for 4U2N)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:230
                                                                                                                                                                                                                                                                      
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhh.....eeeee..eeeeehhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhheeee...hhhhhhhhhhhh.hhhhhhhhhhhhhh...eeee..hhhhhhhhhhhhhhhh.....eeeee..eeeeehhhhhhhhhhhhhhhhhhh...eee.....hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4u2n A   1 SDFPQHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDKDVVHLDISNAAGLGQVLEFMYTAKLSLSPENVDDVLAVATFLQMQDIITACHALKSLAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNSRSAVVELPAAVQPQSFQQILSFCYTGRLSDQDLLMYTAGFLQIQEIMEKGTEFFLK 248
                                    10        20        30        40        50    ||  61        71        81        91       101       111  ||   134       144       154       164       174       184       194       204       214  ||   228       238       248
                                                                                 55|                                                      114|                                                                                      217|                          
                                                                                  57                                                       128                                                                                       222                          


Chain B from PDB  Type:PROTEIN  Length:235
                                                                                                                                                                                                                                                                           
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhh.....eeeee..eeeeehhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhh.eee...hhhhhhhhhhhh.hhhhhhhhhhhhhhh....eee.....hhhhhhhhhhhhhh.....eeeee..eeeeehhhhhhhhhhhhhhhhhhh...eee.....hhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4u2n B   1 SDFPQHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQKDVVHLDISNAAGLGQVLEFMYTAKLSLSPENVDDVLAVATFLQMQDIITACHALKSLATAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNSRSAVVELPAAVQPQSFQQILSFCYTGRLSMNDQDLLMYTAGFLQIQEIMEKGTEFFLK 248
                                    10        20        30        40        50        60        70        80        90       100       110    || 131       141       151       161       171       181       191       201       211       223       233       243     
                                                                                                                                            115|                                                                                         219|                          
                                                                                                                                             127                                                                                          222
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4U2N)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4U2N)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4U2N)

(-) Gene Ontology  (22, 25)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        NACC1_HUMAN | Q96RE7: 3ga1
        ZBT17_HUMAN | Q13105: 2lvr 2lvt 2lvu 2m0d 2m0e 2m0f 2n25 2n26 2q81 3m52 4u2m 5ion

(-) Related Entries Specified in the PDB File

4u2m COMPLEX OF THE MIZ1- AND BCL6 POZ DOMAINS.