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(-) Description

Title :  2.8A RESOLUTION STRUCTURE OF SRPN2 (K198C) FROM ANOPHELES GAMBIAE
 
Authors :  S. Lovell, K. P. Battaile, X. Zhang, D. A. Meekins, C. An, K. Michel
Date :  28 Oct 14  (Deposition) - 24 Dec 14  (Release) - 24 Dec 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym. Unit :  A,B,C
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Keywords :  Serpin, Serine Protease Inhibitor, Insect Immunity, Hydrolase Inhibitor (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  X. Zhang, D. A. Meekins, C. An, M. Zolkiewski, K. P. Battaile, S. Lovell K. Michel
2. 8A Resolution Structure Of Srpn2 (K198C) From Anopheles Gambiae
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - SERPIN 2
    Chains: A, B, C
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28A
    Expression System Strain: BL21(DE3) PRARE
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: SRPN2
    Mutation: YES
    Organism Common: AFRICAN MALARIA MOSQUITO
    Organism Scientific: ANOPHELES GAMBIAE
    Organism Taxid: 7165

 Structural Features

(-) Chains, Units

  123
Asymmetric Unit : ABC
Biological Unit 1 (1x): A  
Biological Unit 2 (1x):  B 
Biological Unit 3 (1x):   C

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4ROB)

(-) Sites  (0, 0)

(no "Site" information available for 4ROB)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4ROB)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4ROB)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4ROB)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4ROB)

(-) Exons   (0, 0)

(no "Exon" information available for 4ROB)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:356
                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhh.....eeehhhhhhhhhhhhhhhh....hhhhhh.......hhhhhhhhhhhhhhhhh.....eeeeeeeeeee......hhhhhhhhhhhhh..eee....hhhhhhhhhhhhhhhh.........hhhhhh...eeeeeeeeeeee...........eeee.......eeeeeeeeeeeeeeeee....eeeeeee.....eeeeeeee....hhhhhhhhhhhhhhhhhhhh.eeeeeeeeee.eeeeeeeehhhhhhhh..hhhhh...............eeeeeeeeee...ee...eeee....eeeeeee.....eeeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rob A  27 GPFQGQRQNEFDLMFVKEIFKNHNSNVVLSPFSVKILLTLIYEASDTSSNTKRELSSVIQNDNIDHTRSYYKQLLESAQQDNKDYDLNIATNFFVDDFIEVINKYQQIANTHYHAMLEKVSYSNPTQTAATINNWVSEHTNGRLREIVTPDSLEGAVITLVNVIYFCGLWTYPFPEVANNVKPFYGTRGKPTNAQYMEQNGQFYYDNSADLGAQILRLPYRGNKLAMYFILPNPDNTVNQVLDRINSASLHQALWYMEENEVNVTLPKFKFDFSEQLNEPLQQVGIREIFSQNASLPLLARGVRVSRIFQKAGITINELGSEAVQIFNANRPFIFFIEDETLGTMLFAGKIENPVF 409
                                    36        46        56        66       |81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331 ||    347       357  ||   383       393       403      
                                                                          74|                                                                                                                                                                                                                                                          333|                 360|                                
                                                                           80                                                                                                                                                                                                                                                           340                  377                                


Chain B from PDB  Type:PROTEIN  Length:356
                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhh.....eeehhhhhhhhhhhhhhhh...hhhhhh.......hhhhhhhhhhhhhhhhh.....eeeeeeeeeeee.....hhhhhhhhhhhh.eeeeee...hhhhhhhhhhhhhhhh.........hhhhhh...eeeeeeeeeeee...........eeee.......eeeeeeeeeeeeeeeee....eeeeeee.....eeeeeeee....hhhhhhh..hhhhhhhhhhh.eeeeeeeeee.eeeeeeeehhhhhhhh..hhhhh................eeeeeeeeee...ee...eeee....eeeeeee.....eeeeeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rob B  27 GPFQGQRQNEFDLMFVKEIFKNHNSNVVLSPFSVKILLTLIYEASDTSNTKRELSSVIQNDNIDHTRSYYKQLLESAQQDNKDYDLNIATNFFVDDFIEVINKYQQIANTHYHAMLEKVSYSNPTQTAATINNWVSEHTNGRLREIVTPDSLEGAVITLVNVIYFCGLWTYPFPEVANNVKPFYGTRGKPTNAQYMEQNGQFYYDNSADLGAQILRLPYRGNKLAMYFILPNPDNTVNQVLDRINSASLHQALWYMEENEVNVTLPKFKFDFSEQLNEPLQQVGIREIFSQNASLPLLARGEVRVSRIFQKAGITINELGSEAVQIFNANRPFIFFIEDETLGTMLFAGKIENPVF 409
                                    36        46        56        66      ||82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332||     347       357  ||   383       393       403      
                                                                         73|                                                                                                                                                                                                                                                          333|                  360|                                
                                                                          80                                                                                                                                                                                                                                                           339                   377                                


Chain C from PDB  Type:PROTEIN  Length:351
                                                                                                                                                                                                                                                                                                                                                                                               
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhh.....eeehhhhhhhhhhhhhhhh....hhhhhhhh....hhhhhhhhhhhhhhhhh.....eeeeeeeeeeee...eehhhhhhhhhhhh.eeeeee...hhhhhhhhhhhhhhhh..................eeeeeeeeeeee........eeee.......eeeeeeeeeeeeeeeee....eeeeeee.....eeeeeeee....hhhhhhh..hhhhhhhhhhh.eeeeeeeeee.eeeeeeeehhhhhhhh..hhhhh........ee......eeeeeeeeee...ee..eee....eeeeeee.....eeeeeee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4rob C  27 GPFQGQRQNEFDLMFVKEIFKNHNSNVVLSPFSVKILLTLIYEASDTSNTKRELSSVIQNDNIDHTRSYYKQLLESAQQDNKDYDLNIATNFFVDDFIEVINKYQQIANTHYHAMLEKVSYSNPTQTAATINNWVSEHTNGRLREIVTPDSLEGAVITLVNVIYFCGLWTYPFPENVKPFYGTRGKPTNAQYMEQNGQFYYDNSADLGAQILRLPYRGNKLAMYFILPNPDNTVNQVLDRINSASLHQALWYMEENEVNVTLPKFKFDFSEQLNEPLQQVGIREIFSQNASLPLLARGEVRVSRIFQKAGITINELGSEQIFNANRPFIFFIEDETLGTMLFAGKIENPVF 409
                                    36        46        56        66       |82        92       102       112       122       132       142       152       162       172       182       192       202    || 215       225       235       245       255       265       275       285       295       305       315       325       340       350       378       388       398       408 
                                                                          74|                                                                                                                           207|                                                                                                                       333|                 359|                               
                                                                           81                                                                                                                            211                                                                                                                        339                  378
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4ROB)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4ROB)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4ROB)

(-) Gene Ontology  (1, 1)

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        Q005N3_ANOGA | Q005N3: 3pzf 4ro9 4roa 4rsq

(-) Related Entries Specified in the PDB File

4ro9 4roa