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(-) Description

Title :  CHK1 KINASE DOMAIN IN COMPLEX WITH DIAZACARBAZOLE GNE-783
 
Authors :  C. Wiesmann, P. Wu
Date :  24 Jul 14  (Deposition) - 17 Dec 14  (Release) - 17 Dec 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Protein Kinase, Phosphotransfer Catalyst, Transferase-Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. Gazzard, B. Appleton, K. Chapman, H. Chen, K. Clark, J. Drobnick, S. Goodacre, J. Halladay, J. Lyssikatos, S. Schmidt, S. Sideris, C. Wiesmann, K. Williams, P. Wu, I. Yen, S. Malek
Discovery Of The 1, 7-Diazacarbazole Class Of Inhibitors Of Checkpoint Kinase 1.
Bioorg. Med. Chem. Lett. V. 24 5704 2014
PubMed-ID: 25453805  |  Reference-DOI: 10.1016/J.BMCL.2014.10.063

(-) Compounds

Molecule 1 - SERINE/THREONINE-PROTEIN KINASE CHK1
    Chains: A, B
    EC Number: 2.7.11.1
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Taxid: 7108
    Fragment: KINASE DOMAIN, UNP RESIDUES 1-289
    Gene: CHEK1, CHK1
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: CHK1 CHECKPOINT HOMOLOG, CELL CYCLE CHECKPOINT KINASE, CHECKPOINT KINASE-1

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric Unit (1, 2)
No.NameCountTypeFull Name
13DX2Ligand/Ion3-[4-(4-METHYLPIPERAZIN-1-YL)PHENYL]-9H-PYRROLO[2,3-B:5,4-C']DIPYRIDINE-6-CARBONITRILE
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
13DX1Ligand/Ion3-[4-(4-METHYLPIPERAZIN-1-YL)PHENYL]-9H-PYRROLO[2,3-B:5,4-C']DIPYRIDINE-6-CARBONITRILE
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
13DX1Ligand/Ion3-[4-(4-METHYLPIPERAZIN-1-YL)PHENYL]-9H-PYRROLO[2,3-B:5,4-C']DIPYRIDINE-6-CARBONITRILE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELEU A:15 , ALA A:36 , VAL A:68 , LEU A:84 , GLU A:85 , TYR A:86 , CYS A:87 , LEU A:137 , ASP A:148 , HOH A:457BINDING SITE FOR RESIDUE 3DX A 301
2AC2SOFTWARELEU B:15 , ALA B:36 , LYS B:38 , VAL B:68 , GLU B:85 , TYR B:86 , CYS B:87 , LEU B:137 , ASP B:148 , HOH B:420 , HOH B:421BINDING SITE FOR RESIDUE 3DX B 301

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4QYH)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Asn A:229 -Pro A:230
2Asn B:229 -Pro B:230

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4QYH)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4QYH)

(-) Exons   (0, 0)

(no "Exon" information available for 4QYH)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:264
                                                                                                                                                                                                                                                                                                        
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .......eeeeeeee...eeeeeee......eeeeeeee...hhhhhhhhhhh.......eeeeeee..eeeeeee....ee.hhhh......hhhhhhhhhhhhhhhhhhhhhh.ee........eee.....eee......ee.ee..ee.............hhhhhhh...hhhhhhhhhhhhhhhhhhhh..........hhhhhhhhh......hhhhhhhhhhhhhhhhh........hhhhhh............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4qyh A   3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKNIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGA 273
                                    12        22        32        42||      59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269    
                                                                   43|                                                                                                                                                                                                                              
                                                                    51                                                                                                                                                                                                                              


Chain B from PDB  Type:PROTEIN  Length:264
                                                                                                                                                                                                                                                                                                        
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......eeeeeeee......eeeeee.....eeeeeeee...hhhhhhhhhh........eeeeeee..eeeeeee....ee.hhhh......hhhhhhhhhhhhhhhhhhhhhh.ee........eee.....eee......ee.ee..ee........hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh..........hhhhhhhhh......hhhhhhhhhhhhhhhhh........hhhhhh............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4qyh B   3 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKNIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGA 273
                                    12        22        32        42||      59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269    
                                                                   43|                                                                                                                                                                                                                              
                                                                    51
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4QYH)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4QYH)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4QYH)

(-) Gene Ontology  (44, 44)

Asymmetric Unit(hide GO term definitions)

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  4qyh
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  CHK1_HUMAN | O14757
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  2.7.11.1
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  CHK1_HUMAN | O14757
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CHK1_HUMAN | O14757: 1ia8 1nvq 1nvr 1nvs 1zlt 1zys 2ayp 2br1 2brb 2brg 2brh 2brm 2brn 2bro 2c3j 2c3k 2c3l 2cgu 2cgv 2cgw 2cgx 2e9n 2e9o 2e9p 2e9u 2e9v 2gdo 2ghg 2hog 2hxl 2hxq 2hy0 2qhm 2qhn 2r0u 2wmq 2wmr 2wms 2wmt 2wmu 2wmv 2wmw 2wmx 2x8d 2x8e 2x8i 2xey 2xez 2xf0 2ydi 2ydj 2ydk 2yer 2yex 2ym3 2ym4 2ym5 2ym6 2ym7 2ym8 2ywp 3f9n 3jvr 3jvs 3nlb 3ot3 3ot8 3pa3 3pa4 3pa5 3tkh 3tki 3u9n 4fsm 4fsn 4fsq 4fsr 4fst 4fsu 4fsw 4fsy 4fsz 4ft0 4ft3 4ft5 4ft7 4ft9 4fta 4ftc 4fti 4ftj 4ftk 4ftl 4ftm 4ftn 4fto 4ftq 4ftr 4ftt 4ftu 4gh2 4hyh 4hyi 4jik 4qye 4qyf 4qyg 4rvk 4rvl 4rvm 5dls 5f4n

(-) Related Entries Specified in the PDB File

4qye 4qyf 4qyg