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(-) Description

Title :  CRYSTAL STRUCTURE OF NITROALKANE OXIDASE FROM PSEUDOMONAS AERUGINOSA
 
Authors :  Y. M. Chi, J. H. Lee
Date :  02 Jun 14  (Deposition) - 08 Jul 15  (Release) - 08 Jul 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.91
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Tim Barrel, Fmn Binding, Cytosol, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. M. Chi, J. H. Lee
Crystal Structures And Reaction Mechanisms Of Nitroalkane Oxidase (Nao) From Pseudomonas Aeruginosa
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - NITRONATE MONOOXYGENASE FAMILY PROTEIN
    Chains: A, B
    EC Number: 1.7.3.1
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28A
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: M801_4200
    Organism Scientific: PSEUDOMONAS AERUGINOSA
    Organism Taxid: 1352354
    Strain: PAO581
    Synonym: NAO, NITROALKANE OXIDASE

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric/Biological Unit (1, 2)
No.NameCountTypeFull Name
1FMN2Ligand/IonFLAVIN MONONUCLEOTIDE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREALA A:18 , PRO A:19 , MET A:20 , LEU A:21 , VAL A:23 , ASN A:69 , PHE A:71 , HIS A:133 , GLN A:176 , ALA A:180 , GLY A:181 , GLY A:217 , GLY A:218 , GLN A:237 , MET A:238 , GLY A:239 , THR A:240 , TYR A:254 , TRP A:325 , HOH A:502 , HOH A:504 , HOH A:535BINDING SITE FOR RESIDUE FMN A 401
2AC2SOFTWAREALA B:18 , PRO B:19 , MET B:20 , LEU B:21 , ASN B:69 , PHE B:71 , HIS B:133 , GLN B:176 , ALA B:180 , GLY B:181 , GLY B:217 , GLY B:218 , GLN B:237 , MET B:238 , GLY B:239 , THR B:240 , TYR B:254 , TRP B:325 , GLY B:327 , HOH B:520 , HOH B:521 , HOH B:546 , HOH B:566BINDING SITE FOR RESIDUE FMN B 401

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4QIS)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Tyr A:299 -Pro A:300
2Tyr B:299 -Pro B:300

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4QIS)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4QIS)

(-) Exons   (0, 0)

(no "Exon" information available for 4QIS)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:346
                                                                                                                                                                                                                                                                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhh.....eee.......hhhhhhhhhhh...eeee....hhhhhhhhhhhhhh.....eeeeee.......hhhhhhhhhhhhhhhhhhh...................hhhhhhhhhh..eeeee....hhhhhhhhhhh..eeeeee.hhhhhhhhhhh...eeeee.....ee....hhhhh....hhhhhhhhhhhhh...eeee....hhhhhhhhhhh...eeeehhhhhh......hhhhhhhhhhhhhhh.eee.......eee....................hhhhhhhhhhhhhhhh.............hhhhh...hhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qis A   4 RFTRLLGIQQPIIQAPMLGVSTPALAAAVSNAGGLGSIAITGSAAEKGRALIREVRGLTDKPFNVNLFCHRPGQADPARERAWLDYLKPLFAEFGAEPPVRLKNIYLSFLEDPTLLPMLLEERPAAVSFHFGAPPRDQVRALQAVGIRVLVCATTPEEAALVEAAGADAVVAQGIEAGGHRGVFEPERGDAAIGTLALVRLLAARGSLPVVAAGGIMDGRGIRAALELGASAVQMGTAFVLCPESSANAAYREALKGPRAARTALTVTMSGRSARGLPNRMFFDAAAPGVPPLPDYPFVYDATKALQTAALARGNHDFAAQWAGQGAALARELPAAELLRTLVEEL 349
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343      


Chain B from PDB  Type:PROTEIN  Length:349
                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhh....eee.......hhhhhhhhhhh...eeee....hhhhhhhhhhhhhh.....eeeeee.......hhhhhhhhhhhhhhhhhhh...................hhhhhhhhhh..eeeee....hhhhhhhhhh...eeeeee.hhhhhhhhhhhh..eeeee.....ee....hhhhh....hhhhhhhhhhhhh...eeee....hhhhhhhhhhh...eeeehhhhh.......hhhhhhhhhhhhhhh.eee.......eee....................hhhhhhhhhhhhhhhh.............hhhhh...hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4qis B   2 TDRFTRLLGIQQPIIQAPMLGVSTPALAAAVSNAGGLGSIAITGSAAEKGRALIREVRGLTDKPFNVNLFCHRPGQADPARERAWLDYLKPLFAEFGAEPPVRLKNIYLSFLEDPTLLPMLLEERPAAVSFHFGAPPRDQVRALQAVGIRVLVCATTPEEAALVEAAGADAVVAQGIEAGGHRGVFEPERGDAAIGTLALVRLLAARGSLPVVAAGGIMDGRGIRAALELGASAVQMGTAFVLCPESSANAAYREALKGPRAARTALTVTMSGRSARGLPNRMFFDAAAPGVPPLPDYPFVYDATKALQTAALARGNHDFAAQWAGQGAALARELPAAELLRTLVEELR 350
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4QIS)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4QIS)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4QIS)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 4QIS)

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4qit 4qiu