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(-) Description

Title :  CRYSTAL STRUCTURE OF A N-ACETYLMURAMOYL-L-ALANINE AMIDASE (BACUNI_02947) FROM BACTEROIDES UNIFORMIS ATCC 8492 AT 1.30 A RESOLUTION
 
Authors :  Joint Center For Structural Genomics (Jcsg)
Date :  17 Apr 14  (Deposition) - 21 May 14  (Release) - 24 Dec 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.30
Chains :  Asym./Biol. Unit :  A
Keywords :  Pf07313 Family Protein, Duf 1460, Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi- Biology, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of A Hypothetical Protein (Bacuni_02947) From Bacteroides Uniformis Atcc 8492 At 1. 30 A Resolution
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN
    Atcc: 8492
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: SPEEDET
    Expression System Strain: PB1
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 24-262
    Gene: BACUNI_02947
    Organism Scientific: BACTEROIDES UNIFORMIS
    Organism Taxid: 411479

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 9)

Asymmetric/Biological Unit (3, 9)
No.NameCountTypeFull Name
12YP1Ligand/Ion(2R)-2-[[(1R,2S,3R,4R,5R)-4-ACETAMIDO-2-[(2S,3R,4R,5S,6R)-3-ACETAMIDO-6-(HYDROXYMETHYL)-4,5-BIS(OXIDANYL)OXAN-2-YL]OXY-6,8-DIOXABICYCLO[3.2.1]OCTAN-3-YL]OXY]PROPANOIC ACID
2MSE7Mod. Amino AcidSELENOMETHIONINE
3NA1Ligand/IonSODIUM ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETYR A:41 , ASP A:62 , CYS A:63 , THR A:64 , ARG A:109 , HIS A:111 , TYR A:144 , TYR A:152 , LEU A:208 , VAL A:210 , ALA A:211 , HIS A:212 , HOH A:401 , HOH A:439 , HOH A:442 , HOH A:497 , HOH A:534 , HOH A:606 , HOH A:660 , HOH A:734 , HOH A:808 , HOH A:829 , HOH A:850BINDING SITE FOR RESIDUE 2YP A 301
2AC2SOFTWARETHR A:203 , THR A:205 , LEU A:208 , HOH A:473 , HOH A:487 , HOH A:521BINDING SITE FOR RESIDUE NA A 302

(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:237
                                                                                                                                                                                                                                                                             
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhh..........................hhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhh..hhhhh..hhhhhhhhhhhh..eeehhhhhh..eee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eee.ee.hhh............eeeeee......eeeeeeeeee..eeeeeeee....eeee...hhhhhhhhh..eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4q5k A  26 GKDmLSNGIKYLDVPYVAHTLEADGPEELVINCDEVDCTTLVEYVLAETLTPKLADGDISESAFADNLQKIRYRDGKIDGYTSRLHYIADWINNGVRNGFLQDVTGAmSPDTERLSISYmSSHPQLYKQLANSPENVAKmKKIEQSLSGKEVHYLPKAKLPADGLPWIKDGDIIAITTNTPGLDVAHmGIAFYADNKLLLVHASSTDKKVVVSKVPLSQmLKDNNKWTGIRVLRmKK 262
                               |    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255    |  
                               |                                                                                                     133-MSE     145-MSE             165-MSE                                         213-MSE                         245-MSE        260-MSE
                              29-MSE
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4Q5K)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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UniProtKB/TrEMBL
        A7V5T8_BACUC | A7V5T8: 4h4j 4q68

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