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(-) Description

Title :  CRYSTAL STRUCTURE OF CENTRAL COILED-COIL FROM INFLUENZA HEMAGGLUTININ HA2 WITHOUT HEPTAD REPEAT STUTTER
 
Authors :  V. N. Malashkevich, C. D. Higgins, J. R. Lai, S. C. Almo
Date :  05 Feb 14  (Deposition) - 30 Apr 14  (Release) - 24 Dec 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym./Biol. Unit :  A,B,C
Keywords :  Coiled-Coil, Influenza, Hemagglutinin, Stutter, Viral Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  V. N. Malashkevich, C. D. Higgins, J. R. Lai, S. C. Almo
Crystal Structure Of Central Coiled-Coil From Influenzahemagglutinin Ha2 Without Heptad Repeat Stutter
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - HA2-DEL
    Chains: A, B, C
    Engineered: YES
    Organism Common: AVIAN INFLUENZA VIRUS, INFLUENZAVIRUS, INFLUENZA VIRUS SP., INFLUENZA VIRUS
    Organism Scientific: UNIDENTIFIED INFLUENZA VIRUS
    Organism Taxid: 11309
    Other Details: PEPTIDE SYNTHESIS
    Synthetic: YES

 Structural Features

(-) Chains, Units

  123
Asymmetric/Biological Unit : ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 5)

Asymmetric/Biological Unit (2, 5)
No.NameCountTypeFull Name
1ACE2Mod. Amino AcidACETYL GROUP
2NH23Mod. Amino AcidAMINO GROUP

(-) Sites  (0, 0)

(no "Site" information available for 4OXM)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4OXM)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4OXM)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 4OXM)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:40
                                                                       
               SCOP domains ---------------------------------------- SCOP domains
               CATH domains ---------------------------------------- CATH domains
               Pfam domains ---------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------- PROSITE
                 Transcript ---------------------------------------- Transcript
                  4oxm A 41 xWGSIDQINGKLNRVIEKFHQIEKEFSEVEGRIQDLEKYx 84
                            |       50       |64        74        84
                            |               58|                   84-NH2
                           41-ACE            63                     


Chain B from PDB  Type:PROTEIN  Length:38
                                                                     
               SCOP domains -------------------------------------- SCOP domains
               CATH domains -------------------------------------- CATH domains
               Pfam domains -------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------- PROSITE
                 Transcript -------------------------------------- Transcript
                  4oxm B 43 GSIDQINGKLNRVIEKFHQIEKEFSEVEGRIQDLEKYx 84
                                    52     || 66        76       |
                                          58|                   84-NH2
                                           63                     


Chain C from PDB  Type:PROTEIN  Length:40
                                                                       
               SCOP domains ---------------------------------------- SCOP domains
               CATH domains ---------------------------------------- CATH domains
               Pfam domains ---------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------- PROSITE
                 Transcript ---------------------------------------- Transcript
                  4oxm C 41 xWGSIDQINGKLNRVIEKFHQIEKEFSEVEGRIQDLEKYx 84
                            |       50       |64        74        84
                            |               58|                   84-NH2
                           41-ACE            63
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4OXM)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        A8TXX2_9ORTO | A8TXX2: 4p67 4s1x

(-) Related Entries Specified in the PDB File

4p67