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(-) Description

Title :  CRYSTAL STRUCTURE OF ARG119GLN MUTANT OF PEPTIDYL-TRNA HYDROLASE FROM ACINETOBACTER BAUMANNII AT 1.49 A RESOLUTION
 
Authors :  J. Sikarwar, D. Dube, S. Kaushik, M. Sinha, P. Kaur, S. Sharma, T. P. Sing
Date :  24 Jan 14  (Deposition) - 12 Feb 14  (Release) - 12 Feb 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.49
Chains :  Asym./Biol. Unit :  A
Keywords :  Peptidyl-Trna Hydrolase, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Sikarwar, D. Dube, S. Kaushik, M. Sinha, P. Kaur, S. Sharma, T. P. Singh
Crystal Structure Of Arg119Gln Mutant Of Peptidyl-Trna Hydrolase From Acinetobacter Baumannii At 1. 49 A Resolution
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PEPTIDYL-TRNA HYDROLASE
    Chains: A
    EC Number: 3.1.1.29
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: PTH
    Mutation: YES
    Organism Scientific: ACINETOBACTER BAUMANNII
    Organism Taxid: 575584
    Strain: ATCC 19606
    Synonym: PTH

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2TLA1Ligand/IonL(+)-TARTARIC ACID

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:14 , PHE A:26 , GLU A:30 , MET A:66 , HOH A:311 , HOH A:367 , HOH A:500BINDING SITE FOR RESIDUE GOL A 201
2AC2SOFTWAREASN A:12 , HIS A:22 , MET A:69 , ASN A:70 , ASN A:116 , HOH A:483 , HOH A:489BINDING SITE FOR RESIDUE TLA A 202

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4OLJ)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4OLJ)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4OLJ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4OLJ)

(-) Exons   (0, 0)

(no "Exon" information available for 4OLJ)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:196
                                                                                                                                                                                                                                    
               SCOP domains d4olja_ A: automated matches                                                                                                                                                                         SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeee..........hhhhhhhhhhhhhhhhhh...eeehhh.eeeeeeee..eeeeeeee..hhhhhhhhhhhhhhhh..hhh.eeeeeee.......eeeee......hhhhhhhhhhhh...eeeeee........hhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4olj A  -2 GSHMSNISLIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLPMTYMNRSGQSVVPFSKFYQIAPEAILIAHDELDMNPGVIRLKTGGGHGGHNGLQDIVPHIGPNFHRLRIGIGHPGSKERVSGHVLGKAPSNEQSLMDGAIDHALSKVKLLVQGQVPQAMNQINAYKPA 193
                                     7        17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4OLJ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4OLJ)

(-) Gene Ontology  (4, 4)

Asymmetric/Biological Unit(hide GO term definitions)

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        D0C9L6_ACIB2 | D0C9L6: 3wh4 4fop 4fot 4hoy 4iko 4jwk 4jx9 4jy7 4lwq 4lwr

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