Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym./Biol. Unit
(-)Asym./Biol. Unit - sites
collapse expand < >
Image Asym./Biol. Unit
Asym./Biol. Unit  (Jmol Viewer)
Image Asym./Biol. Unit - sites
Asym./Biol. Unit - sites  (Jmol Viewer)

(-) Description

Title :  3D STRUCTURE OF THE E323A CATALYTIC MUTANT OF GAN42B, A GH42 BETA-GALACTOSIDASE FROM G. STEAROTHERMOPHILUS
 
Authors :  H. V. Solomon, O. Tabachnikov, S. Lansky, H. Feinberg, L. Govada, N. E. C Y. Shoham, G. Shoham
Date :  26 Aug 15  (Deposition) - 09 Dec 15  (Release) - 31 May 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym./Biol. Unit :  A,B,C
Keywords :  Glycoside Hydrolase, Geobacillus Stearothermophilus, Mutant Proteins, Beta-Galactosidase, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. V. Solomon, O. Tabachnikov, S. Lansky, R. Salama, H. Feinberg, Y. Shoham, G. Shoham
Structure-Function Relationships In Gan42B, An Intracellula Gh42 Beta-Galactosidase From Geobacillus Stearothermophilus
Acta Crystallogr. , Sect. D V. 71 2433 2015
PubMed-ID: 26627651  |  Reference-DOI: 10.1107/S1399004715018672
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - BETA-GALACTOSIDASE
    Chains: A, B, C
    EC Number: 3.2.1.23
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: GANB
    Mutation: YES
    Organism Scientific: GEOBACILLUS STEAROTHERMOPHILUS
    Organism Taxid: 1422
    Synonym: BETA-GAL

 Structural Features

(-) Chains, Units

  123
Asymmetric/Biological Unit : ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 12)

Asymmetric/Biological Unit (2, 12)
No.NameCountTypeFull Name
1GOL9Ligand/IonGLYCEROL
2ZN3Ligand/IonZINC ION

(-) Sites  (12, 12)

Asymmetric Unit (12, 12)
No.NameEvidenceResiduesDescription
01AC1SOFTWARECYS A:124 , CYS A:164 , CYS A:166 , CYS A:169binding site for residue ZN A 701
02AC2SOFTWAREGLU A:452 , ARG A:453 , PHE A:622 , VAL A:623 , LYS A:624 , HIS A:625 , HOH A:1019 , HOH A:1059binding site for residue GOL A 702
03AC3SOFTWAREARG A:120 , GLU A:159 , ASP A:285 , TYR A:287 , PHE A:361 , GLU A:371 , HOH A:829 , HOH C:883binding site for residue GOL A 703
04AC4SOFTWAREASN A:330 , HIS A:332 , LYS A:333 , ASN A:335 , ALA C:429 , GLN C:430 , GLY C:431 , ALA C:434 , LYS C:437binding site for residue GOL A 704
05AC5SOFTWARECYS B:124 , CYS B:164 , CYS B:166 , CYS B:169binding site for residue ZN B 701
06AC6SOFTWAREGLU B:452 , ARG B:453 , PHE B:622 , VAL B:623 , LYS B:624 , HIS B:625 , HOH B:820binding site for residue GOL B 702
07AC7SOFTWAREARG B:120 , GLU B:159 , ASP B:285 , TYR B:287 , PHE B:361 , GLU B:371 , HOH B:963binding site for residue GOL B 703
08AC8SOFTWAREARG B:438 , THR B:442 , ARG B:598 , HOH B:924 , HOH B:925binding site for residue GOL B 704
09AC9SOFTWARECYS C:124 , CYS C:164 , CYS C:166 , CYS C:169binding site for residue ZN C 701
10AD1SOFTWAREGLU C:452 , ARG C:453 , VAL C:623 , LYS C:624 , HIS C:625 , HOH C:809binding site for residue GOL C 702
11AD2SOFTWAREARG C:438 , THR C:442 , GLN C:445 , ARG C:598binding site for residue GOL C 703
12AD3SOFTWAREHOH B:862 , ARG C:120 , GLU C:159 , ASP C:285 , TYR C:287 , PHE C:361 , GLU C:371 , HOH C:815binding site for residue GOL C 704

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5DFA)

(-) Cis Peptide Bonds  (3, 3)

Asymmetric/Biological Unit
No.Residues
1Phe A:361 -Gln A:362
2Phe B:361 -Gln B:362
3Phe C:361 -Gln C:362

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5DFA)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5DFA)

(-) Exons   (0, 0)

(no "Exon" information available for 5DFA)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:685
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeeeehhhhh..hhhhhhhhhhhhhhh...eeee...hhhhhh.......hhhhhhhhhhhhhh..eeeee......hhhhhhhhhhhh....................hhhhhhhhhhhhhhhhhhhh....eeeee..........hhhhhhhhhhhhhhhh..hhhhhhhhhh.hhhhh...hhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....ee.eee............hhhhhhhhh...eeee.........hhhhhhhhhhhhhhhhhh.....eeeeee................hhhhhhhhhhhhh.eeeeee.........................hhhhhhhhhhhhhhhhhhhhh.......eeee.hhhhhhhhhhh........hhhhhhhhhhhhhhhh...eeee..........eeee......hhhhhhhhhhhhhh..eeeee.................hhhhhhhhheeeeeeee......eeeee...eeeee.eeeeeee...eeeeee........eeeeeeee..eeeeee..eehhhhhhhhhhhhhhhh.......ee....eeeeeee...eeeeeeee.....eeeeeeeeeee.....eeeeeeee....eeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5dfa A   3 PKYERTYTTQANFILHGGDYNPDQWLDRPDILQADLELMKLSHTNTFTVGVFAWSALEPEEGVYRFEWLDKVFDDIYRIGGRVILATPSGARPAWLSQKYPEVLRVNAARVRQLHGGRHNHCFTSSVYREKTQHINRLLAERYGDHPALLMWHVSNEYGGECHCNLCQEAFREWLKKKYNHDLDALNAAWWTSFWSHTYTDWSQIESPSPIGEHTIHGLNLDWKRFVTDQTISFFENEIVPLRELTPHIPITTNFMADTHDLIPFQGLDYSKFAKHLDVISWDAYPAWHNDWESTADLAMKVGFINDLYRSLKQQPFLLMACTPSLVNWHKVNKAKRPGMHFLSSMQMIAHGSDSILYFQWRKSRGSFEKFHGAVVDHDNRTDSRVFQEVAEVGKALKKMSGIVGTNRPAEVAILYDWENNWALNDAQGFAAETKRYPQTLVQHYRPFWERDIPVDVITKEHDFSRYKLLIAPMLYLVSEETIARLKEFVANGGTLVMTYISGIVDEHDLAYLGGWHQDLREMFGMEPIETDTLYPRDRNSVHYRGRSYELKDYATVIKIHAATVEGVYEDDFYADTPAVTSNQYGKGQAYYIGGRLEDQFHRDFYQELMEKLDLRPVLFVKHEKGVSVQARQAPECDYVFIMNFTEEKQAVVLEEKVKDLFTGEEIVGEIMLDKYEVRVVEKRR 687
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682     


Chain B from PDB  Type:PROTEIN  Length:684
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .............eeeeeehhhhh..hhhhhhhhhhhhhhh...eeee...hhhhhh.......hhhhhhhhhhhhhh..eeeee.hhhh.hhhhhhhhhhhh....................hhhhhhhhhhhhhhhhhhhh....eeeee..........hhhhhhhhhhhhhhhh..hhhhhhhhhh.hhhhh...hhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....ee.ee.............hhhhhhhhh...eee..........hhhhhhhhhhhhhhhhhh.....eeeee.................hhhhhhhhhhhhh.eeeeee.........................hhhhhhhhhhhhhhhhhhhhh.......eeee.hhhhhhhhhhh........hhhhhhhhhhhhhhhh...eeee..........eeee......hhhhhhhhhhhhhh..eeeee.................hhhhhhhhheeeeeeee......eeeee..eeeeee.eeeeeee...eeeeee........eeeeeeee..eeeeee..eehhhhhhhhhhhhhhhh.......ee....eeeeeee...eeeeeeee.....eeeeeeeeeee.....eeeeeeee....eeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5dfa B   4 KYERTYTTQANFILHGGDYNPDQWLDRPDILQADLELMKLSHTNTFTVGVFAWSALEPEEGVYRFEWLDKVFDDIYRIGGRVILATPSGARPAWLSQKYPEVLRVNAARVRQLHGGRHNHCFTSSVYREKTQHINRLLAERYGDHPALLMWHVSNEYGGECHCNLCQEAFREWLKKKYNHDLDALNAAWWTSFWSHTYTDWSQIESPSPIGEHTIHGLNLDWKRFVTDQTISFFENEIVPLRELTPHIPITTNFMADTHDLIPFQGLDYSKFAKHLDVISWDAYPAWHNDWESTADLAMKVGFINDLYRSLKQQPFLLMACTPSLVNWHKVNKAKRPGMHFLSSMQMIAHGSDSILYFQWRKSRGSFEKFHGAVVDHDNRTDSRVFQEVAEVGKALKKMSGIVGTNRPAEVAILYDWENNWALNDAQGFAAETKRYPQTLVQHYRPFWERDIPVDVITKEHDFSRYKLLIAPMLYLVSEETIARLKEFVANGGTLVMTYISGIVDEHDLAYLGGWHQDLREMFGMEPIETDTLYPRDRNSVHYRGRSYELKDYATVIKIHAATVEGVYEDDFYADTPAVTSNQYGKGQAYYIGGRLEDQFHRDFYQELMEKLDLRPVLFVKHEKGVSVQARQAPECDYVFIMNFTEEKQAVVLEEKVKDLFTGEEIVGEIMLDKYEVRVVEKRR 687
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663       673       683    


Chain C from PDB  Type:PROTEIN  Length:685
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeeee.hhhhh..hhhhhhhhhhhhhhh...eeee...hhhhhh.......hhhhhhhhhhhhhh..eeeee.hhhh.hhhhhhhhhhhh....................hhhhhhhhhhhhhhhhhhhh....eeeee..........hhhhhhhhhhhhhhhh..hhhhhhhhhh.hhhhh...hhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....ee.ee.............hhhhhhhhh...eeee.........hhhhhhhhhhhhhhhhhh.....eeeeee................hhhhhhhhhhhhh.eeeeee.........................hhhhhhhhhhhhhhhhhhhhh.......eeee.hhhhhhhhhhh........hhhhhhhhhhhhhhhh...eeee..........eeee......hhhhhhhhhhhhhh..eeeee.................hhhhhhhhheeeeeeee......eeeee...eeeee.eeeeeee...eeeeee........eeeeeeee..eeeeee..eehhhhhhhhhhhhhhhhh......ee....eeeeeee...eeeeeeee.....eeeeeeeeeee.....eeeeeeee....eeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5dfa C   3 PKYERTYTTQANFILHGGDYNPDQWLDRPDILQADLELMKLSHTNTFTVGVFAWSALEPEEGVYRFEWLDKVFDDIYRIGGRVILATPSGARPAWLSQKYPEVLRVNAARVRQLHGGRHNHCFTSSVYREKTQHINRLLAERYGDHPALLMWHVSNEYGGECHCNLCQEAFREWLKKKYNHDLDALNAAWWTSFWSHTYTDWSQIESPSPIGEHTIHGLNLDWKRFVTDQTISFFENEIVPLRELTPHIPITTNFMADTHDLIPFQGLDYSKFAKHLDVISWDAYPAWHNDWESTADLAMKVGFINDLYRSLKQQPFLLMACTPSLVNWHKVNKAKRPGMHFLSSMQMIAHGSDSILYFQWRKSRGSFEKFHGAVVDHDNRTDSRVFQEVAEVGKALKKMSGIVGTNRPAEVAILYDWENNWALNDAQGFAAETKRYPQTLVQHYRPFWERDIPVDVITKEHDFSRYKLLIAPMLYLVSEETIARLKEFVANGGTLVMTYISGIVDEHDLAYLGGWHQDLREMFGMEPIETDTLYPRDRNSVHYRGRSYELKDYATVIKIHAATVEGVYEDDFYADTPAVTSNQYGKGQAYYIGGRLEDQFHRDFYQELMEKLDLRPVLFVKHEKGVSVQARQAPECDYVFIMNFTEEKQAVVLEEKVKDLFTGEEIVGEIMLDKYEVRVVEKRR 687
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5DFA)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5DFA)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5DFA)

(-) Gene Ontology  (8, 8)

Asymmetric/Biological Unit(hide GO term definitions)

 Visualization

(-) Interactive Views

Asymmetric/Biological Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    GOL  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    ZN  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    AD1  [ RasMol ]  +environment [ RasMol ]
    AD2  [ RasMol ]  +environment [ RasMol ]
    AD3  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Phe A:361 - Gln A:362   [ RasMol ]  
    Phe B:361 - Gln B:362   [ RasMol ]  
    Phe C:361 - Gln C:362   [ RasMol ]  
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym./Biol. Unit PNG format | Asym./Biol. Unit - sites PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  5dfa
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  F8TRX0_GEOSE | F8TRX0
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/TrEMBL
 
Access by Enzyme Classificator   (EC Number)
  3.2.1.23
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  F8TRX0_GEOSE | F8TRX0
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        F8TRX0_GEOSE | F8TRX0: 4oif 4ojy

(-) Related Entries Specified in the PDB File

4oif 4OIF IS THE WT ENZYME
4ojy 4OJY CONTAINS INCORRECT COORDINATES OF GANB-E323A. WE REQUEST THESE COORDINATES (4OJY) TO BE OBSOLETED AND SUPERCEDED BY THE CURRENT UPLOADED COORDINATES.