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(-) Description

Title :  CRYSTAL STRUCTURE OF HUMAN BRCA1 BRCT IN COMPLEX WITH NONPHOSPHOPEPTIDE INHIBITOR
 
Authors :  L. Sun, R. A. Edwards, J. N. M. Glover
Date :  14 Jan 14  (Deposition) - 15 Apr 15  (Release) - 27 May 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.05
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Brct Domain, Dsb Dna Damage Repair, Non-Phosphorylated Peptide, Protein Binding (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  E. R. White, L. Sun, Z. Ma, J. M. Beckta, B. A. Danzig, D. E. Hacker, M. Huie, D. C. Williams, R. A. Edwards, K. Valerie, J. N. Glover, M. C. Hartman
Peptide Library Approach To Uncover Phosphomimetic Inhibitors Of The Brca1 C-Terminal Domain.
Acs Chem. Biol. V. 10 1198 2015
PubMed-ID: 25654734  |  Reference-DOI: 10.1021/CB500757U

(-) Compounds

Molecule 1 - BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PLM1
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: BRCT 1 DOMAIN (UNP RESIDUES 1646-1859)
    Gene: BRCA1, RNF53
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: RING FINGER PROTEIN 53
 
Molecule 2 - NONPHOSPHOPEPTIDE INHIBITOR
    Chains: B
    Engineered: YES
    Synthetic: YES

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 4)

Asymmetric/Biological Unit (3, 4)
No.NameCountTypeFull Name
1ACE1Mod. Amino AcidACETYL GROUP
2NH21Mod. Amino AcidAMINO GROUP
3PFF2Mod. Amino Acid4-FLUORO-L-PHENYLALANINE

(-) Sites  (0, 0)

(no "Site" information available for 4OFB)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4OFB)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4OFB)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4OFB)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4OFB)

(-) Exons   (0, 0)

(no "Exon" information available for 4OFB)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:209
                                                                                                                                                                                                                                                  
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee..hhhhhhhhhhhhhhh..ee.........eeee......ee..hhhhhhhhhh..eeeehhhhhhhhhhh...hhhhh...ee.......hhhhhhhhh........eeeee.......hhhhhhhhhhhh..eee.hhhhh......eeeeeehhhhh.hhhhhhhhh....eeehhhhhhhhhhh....hhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4ofb A 1649 RMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKMLNEHDFEVRGDVVNGRNHQGPKRARESQDRKIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVVKELSSFTLGTGVHPIVVVQPDAWTNGFHAIGQMCEAPVVTREWVLDSVALYQCQELDTYLIPQIP 1859
                                  1658      1668      1678      1688      1698      1708      1718      1728      1738      1748      1758      1768      1778      1788      1798      1808      1820      1830      1840      1850         
                                                                                                                                                                                                1816|                                        
                                                                                                                                                                                                 1819                                        


Chain B from PDB  Type:PROTEIN  Length:14
                                               
               SCOP domains -------------- SCOP domains
               CATH domains -------------- CATH domains
               Pfam domains -------------- Pfam domains
         Sec.struct. author .............. Sec.struct. author
                 SAPs(SNPs) -------------- SAPs(SNPs)
                    PROSITE -------------- PROSITE
                 Transcript -------------- Transcript
                4ofb B    1 xTIDfDEYRfRKTx   14
                            |   |   10   |
                            1-ACE    |   |
                                5-PFF|   |
                                    10-PFF
                                        14-NH2
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4OFB)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4OFB)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (100, 100)

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  BRCA1_HUMAN | P38398
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        BRCA1_HUMAN | P38398: 1jm7 1jnx 1n5o 1oqa 1t15 1t29 1t2u 1t2v 1y98 2ing 3coj 3k0h 3k0k 3k15 3k16 3pxa 3pxb 3pxc 3pxd 3pxe 4ifi 4igk 4jlu 4u4a 4y18 4y2g

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