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(-) Description

Title :  CRYSTAL STRUCTURE OF THE DISULFIDE OXIDOREDUCTASE DSBA FROM PROTEUS MIRABILIS
 
Authors :  F. Kurth, J. L. Martin
Date :  09 Jan 14  (Deposition) - 28 May 14  (Release) - 30 Jul 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.77
Chains :  Asym./Biol. Unit :  A
Keywords :  Oxidative Folding Protein, Virulence Factor Maturation Protein, Disulfide Oxidoreductase, Thioredoxin Fold, Dsba, Dithiol Exchange, Dsbb, Periplasmic, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  F. Kurth, W. Duprez, L. Premkumar, M. A. Schembri, D. P. Fairlie, J. L. Martin
Crystal Structure Of The Dithiol Oxidase Dsba Enzyme From Proteus Mirabilis Bound Non-Covalently To An Active Site Peptide Ligand.
J. Biol. Chem. V. 289 19810 2014
PubMed-ID: 24831013  |  Reference-DOI: 10.1074/JBC.M114.552380

(-) Compounds

Molecule 1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)PLYSS
    Expression System Taxid: 562
    Gene: DSBA, PMI2828
    Organism Scientific: PROTEUS MIRABILIS HI4320
    Organism Taxid: 529507
    Strain: HI4320

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1MLI1Ligand/IonMALONATE ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETYR A:40 , VAL A:42 , SER A:127 , PHE A:128 , VAL A:129 , PRO A:170 , TYR A:173 , HOH A:305BINDING SITE FOR RESIDUE MLI A 201

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1A:30 -A:33

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Val A:149 -Pro A:150

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4OCE)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4OCE)

(-) Exons   (0, 0)

(no "Exon" information available for 4OCE)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:189
                                                                                                                                                                                                                             
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eee..........eeeee...hhhhhhhhhh.hhhhhhhhhh.....eeeee......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh..hhhhhhhhh.hhhhhhhhhhhhhhhhhh......eeee...eee........hhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4oce A  -1 SNADISEGKQYTNLSKPVAGAPQVVEFFSFYCPHCYQFSEVYKVNSTVEKNVPENTKMARYHVDFLGPLGKEMTRAWAVAIALGVEDQVSPALFKGIQETQSIRSVDDIRTTFINAGVKAEDYDAAINSFVVNSLVSQQQNAVTDFQINGVPAMVIDGKYKMKNDGISAKSPEEYAKAYSDVVNQLLMK 187
                                     8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4OCE)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4OCE)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4OCE)

(-) Gene Ontology  (4, 4)

Asymmetric/Biological Unit(hide GO term definitions)

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  4oce
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        B4EZ68_PROMH | B4EZ68: 4ocf 4od7

(-) Related Entries Specified in the PDB File

4ocf PROTEUS MIRABLIS DSBA (CYS30SER)
4od7 COMPLEX STRUCTURE OF PROTEUS MIRABLIS DSBA (C30S) WITH A NON-COVALENTLY BOUND PEPTIDE PWATCDS