4O6O - JenaLib

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Title :   STRUCTURAL AND FUNCTIONAL STUDIES THE CHARACTERIZATION OF CYS4 ZINC-FINGER MOTIF IN THE RECOMBINATION MEDIATOR PROTEIN RECR

Authors :   Q. Tang, Y. P. Liu, X. X. Yan, D. C. Liang

Date :   23 Dec 13 (Deposition) - 10 Dec 14 (Release) - 10 Dec 14 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   3.00

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C,D  (1x)

Keywords :   Zinc Finger, Dna Repair, Dna Binding, Recombination (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   Q. Tang, Y. P. Liu, X. X. Yan, D. C. Liang
Structural And Functional Characterization Of Cys4 Zinc Finger Motif In The Recombination Mediator Protein Recr
Dna Repair V. 24 10 2014
PubMed: search | Reference-DOI: 10.1016/J.DNAREP.2014.09.012

Molecule 1 - RECOMBINATION PROTEIN RECR
	Chains	:	A, B, C, D
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Gene	:	RECR
	Mutation	:	YES
	Organism Scientific	:	THERMOANAEROBACTER TENGCONGENSIS
	Organism Taxid	:	273068
	Strain	:	MB4
	Synonym	:	RECR RECOMBINATIONAL DNA REPAIR PROTEIN

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 7)

No.	Name	Count	Type	Full Name
1	IMD	3	Ligand/Ion	IMIDAZOLE
2	ZN	4	Ligand/Ion	ZINC ION

Biological Unit 1 (1, 3)

No.	Name	Count	Type	Full Name
1	IMD	3	Ligand/Ion	IMIDAZOLE
2	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 2 (0, 0)

No.	Name	Count	Type	Full Name
1	IMD	-1	Ligand/Ion	IMIDAZOLE
2	ZN	-1	Ligand/Ion	ZINC ION

Asymmetric Unit (7, 7)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	CYS A:58 , CYS A:67 , CYS A:70 , HOH A:301	BINDING SITE FOR RESIDUE ZN A 201
2	AC2	SOFTWARE	ARG A:121	BINDING SITE FOR RESIDUE IMD A 202
3	AC3	SOFTWARE	HIS A:85 , HOH D:310	BINDING SITE FOR RESIDUE IMD A 203
4	AC4	SOFTWARE	CYS B:58 , CYS B:67 , CYS B:70 , HOH B:301	BINDING SITE FOR RESIDUE ZN B 201
5	AC5	SOFTWARE	PHE B:28 , ASN B:32 , HIS C:85 , PRO C:86 , MET C:87	BINDING SITE FOR RESIDUE IMD B 202
6	AC6	SOFTWARE	CYS C:58 , CYS C:67 , CYS C:70 , HOH C:312	BINDING SITE FOR RESIDUE ZN C 201
7	AC7	SOFTWARE	CYS D:58 , CYS D:67 , CYS D:70 , HOH D:301	BINDING SITE FOR RESIDUE ZN D 201

(no "SS Bond" information available for 4O6O)

(no "Cis Peptide Bond" information available for 4O6O)

(no "SAP(SNP)/Variant" information available for 4O6O)

(no "PROSITE Motif" information available for 4O6O)

(no "Exon" information available for 4O6O)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:197
                                                                                                                                                                                                                                     
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhh....hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhee......ee.................eeee.hhhhhhhhhhh.....eeee...........hhhhh.hhhhhhhhhhh...........hhhhhhhhhhhhhhh.......................hhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4o6o A   0 YYSTSVAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKEKLRYGKICFNITDKEVCDICSDENRDHSTICVVSHPMDVVAMEKVKEYKGVYHVLHGVISPIEGVGPEDIRIKELLERVRDGSVKEVILATNPDIEGEATAMYIAKLLKPFGVKVTRIAHGIPVGGDLEYTDVVTLSKALEGRREV 196
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189

Chain B from PDB  Type:PROTEIN  Length:197
                                                                                                                                                                                                                                     
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........................eeee..hhhhhhhhhhhh....eee............hhhhhhhhhhhhh.......eeee....hhhhhhhhhhhhhhh.....eeee..............hhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4o6o B   0 YYSTSVAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKEKLRYGKICFNITDKEVCDICSDENRDHSTICVVSHPMDVVAMEKVKEYKGVYHVLHGVISPIEGVGPEDIRIKELLERVRDGSVKEVILATNPDIEGEATAMYIAKLLKPFGVKVTRIAHGIPVGGDLEYTDVVTLSKALEGRREV 196
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189

Chain C from PDB  Type:PROTEIN  Length:197
                                                                                                                                                                                                                                     
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhh......hhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.ee......ee.............eeeeeeee.hhhhhhhhh......eeeee.....hhhhh.......hhhhhhhhhh....eeee....hhhhhhhhhhhhh........eee..............hhhhhhhhhhh.ee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4o6o C   0 YYSTSVAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKEKLRYGKICFNITDKEVCDICSDENRDHSTICVVSHPMDVVAMEKVKEYKGVYHVLHGVISPIEGVGPEDIRIKELLERVRDGSVKEVILATNPDIEGEATAMYIAKLLKPFGVKVTRIAHGIPVGGDLEYTDVVTLSKALEGRREV 196
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189

Chain D from PDB  Type:PROTEIN  Length:199
                                                                                                                                                                                                                                       
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhh.....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh...............hhhhhh......eeeee.hhhhhhhhhhh.....eeee.................hhhhhhh.......eeee....hhhhhhhhhhhhhhh.....eeee..............hhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4o6o D  -2 MSYYSTSVAKLIEELSKLPGIGPKTAQRLAFFIINMPLDEVRSLSQAIIEAKEKLRYGKICFNITDKEVCDICSDENRDHSTICVVSHPMDVVAMEKVKEYKGVYHVLHGVISPIEGVGPEDIRIKELLERVRDGSVKEVILATNPDIEGEATAMYIAKLLKPFGVKVTRIAHGIPVGGDLEYTDVVTLSKALEGRREV 196
                                     7        17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187

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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 4O6O)

(no "CATH Domain" information available for 4O6O)

(no "Pfam Domain" information available for 4O6O)

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	RECR_CALS4 \| Q8RDI4	:	3vdp 3vdu 3ve5 4o6p

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 7)

Sites (7, 7)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

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Exons (0, 0)

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Gene Ontology (5, 5)

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