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(-) Description

Title :  CRYSTAL STRUCTURE OF FREE T-CELL LYMPHOMA INVASION AND METASTASIS-1 PDZ DOMAIN QUADRUPLE MUTANT (QM)
 
Authors :  X. Liu, D. C. Speckhard, T. R. Shepherd, S. R. Hengel, E. J. Fuentes
Date :  09 Dec 13  (Deposition) - 13 May 15  (Release) - 15 Feb 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym./Biol. Unit :  A
Keywords :  Beta Barrel Fold Protein, Pdz Domain, Peptide Binding, Specificity Mutant, Scaffold Signaling Protein For Cell Adhesion And Cell Junction, Signaling Domain, Signaling Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  X. Liu, D. C. Speckhard, T. R. Shepherd, Y. J. Sun, S. R. Hengel, L. Yu, C. A. Fowler, L. Gakhar, E. J. Fuentes
Distinct Roles For Conformational Dynamics In Protein-Ligan Interactions.
Structure V. 24 2053 2016
PubMed-ID: 27998539  |  Reference-DOI: 10.1016/J.STR.2016.08.019

(-) Compounds

Molecule 1 - T-LYMPHOMA INVASION AND METASTASIS-INDUCING PROTEIN 1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET21A-6HIS-RTEV
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: PDZ DOMAIN
    Gene: TIAM1
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Strain: HUMAN
    Synonym: TIAM-1

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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 Sequence-Structure Mapping

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(-) Sequences/Alignments

Asymmetric/Biological Unit
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Chain A from PDB  Type:PROTEIN  Length:86
                                                                                                                      
               SCOP domains -------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeee.....eeeeee......eeeeeee...hhhhhh......eeeee..ee.hhhhhhhhhhhhhh.eeeeeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------- Transcript
                 4nxp A 840 GKVTHSIHIEKDTYGFSLSSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMMEDFFSQPSVGLLVRTYPEL 930
                                   849||     864       874       884       894       904       914       924      
                                    850|                                                                          
                                     856
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(-) Gene Ontology  (55, 55)

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  4nxp
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  TIAM1_HUMAN | Q13009
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        TIAM1_HUMAN | Q13009: 2d8i 3kzd 3kze 4gvc 4gvd 4k2o 4k2p 4nxq 4nxr

(-) Related Entries Specified in the PDB File

3kzd THE T-CELL LYMPHOMA INVASION AND METASTASIS-1 PDZ DOMAIN WILD TYPE IN APO STATE
3kze THE T-CELL LYMPHOMA INVASION AND METASTASIS-1 PDZ DOMAIN WILD TYPE IN MODEL PEPTIDE-BOUND STATE
4gvc THE T-CELL LYMPHOMA INVASION AND METASTASIS-1 PDZ DOMAIN WILD TYPE IN PSDC1-BOUND STATE
4gvd THE T-CELL LYMPHOMA INVASION AND METASTASIS-1 PDZ DOMAIN WILD TYPE IN SDC1-BOUND STATE
4nxq
4nxr