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(-) Description

Title :  CRYSTAL STRUCTURE OF EFR3
 
Authors :  X. Wu, R. J. Chi, J. M. Baskin, L. Lucast, C. G. Burd, P. De Camilli, K. M. R
Date :  09 Oct 13  (Deposition) - 22 Jan 14  (Release) - 19 Mar 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.20
Chains :  Asym./Biol. Unit :  A
Keywords :  Heat-Like Repeats, Component Of Stt4 Complex, Ypp1, Plasma Membrane, Protein Binding (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  X. Wu, R. J. Chi, J. M. Baskin, L. Lucast, C. G. Burd, P. De Camilli, K. M. Reinisch
Structural Insights Into Assembly And Regulation Of The Plasma Membrane Phosphatidylinositol 4-Kinase Complex.
Dev. Cell V. 28 19 2014
PubMed-ID: 24360784  |  Reference-DOI: 10.1016/J.DEVCEL.2013.11.012

(-) Compounds

Molecule 1 - PROTEIN EFR3
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Fragment: RESIDUES 8-562
    Gene: EFR3, YMR212C, YM8261.06C
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 559292
    Strain: ATCC 204508 / S288C

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 13)

Asymmetric/Biological Unit (1, 13)
No.NameCountTypeFull Name
1MSE13Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 4N5A)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4N5A)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4N5A)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4N5A)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4N5A)

(-) Exons   (0, 0)

(no "Exon" information available for 4N5A)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:535
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh........hhhhhhhhhhhhhhh....hhhhhh................hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh..hhhhhhh.......hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhh.........hhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4n5a A   9 FTPKHQKLVNQCYPTGRTTDKKPKSSETSYLLYYVNSRRSKLEKVSTYLIKRSTSDLNHRRIGNIAVTLDLmNKIVLHCKENLNVFVKDFLYImNKVLSNNNFNNDVSVVELIELAFSSICQNLDDVLCNGDmEFVQLYQNFVDLFFKIVTERIHNDDmLLKCCIDISNTNSVSSNPQLNHFVSKSVAYTISKFQERNPKFKTLSLEATIGLDKAAEDHDLSVKALQSYFNTTETDKLNLSIRTLLRCLQSTPNKELLEFVCNGIPVQLRYIVILLLVRQLSDKDKNVNPIVSLKLmSSLLVSDVSIVGLSVLDImRKLLNFQLKNATNKEVVAQSCITmTDLNHKTYYAEQTSDmLYELLLKLKSDTVKDVEKNAVVEDIDFLVEHITQPSISLELFIDLAHYmKNHIICLFNIVETEVPSSILFSKLYSLLRELDSHGVQKEmmEEIFDKYGKmALLSGLNYFLENVSEPEYTYYSYHLQAANFLKLNDYKSQTEYKmQTRTLFTKEDLLSYYSDTGSNKYSKKGAQILLSRD 560
                                    18        28        38        48        58        68        78 |      88        98   |   108       118       128       138  |    148       158       168       178       188       198       208       234       245       255       265       275       285       295       305       315      |325       335     | 345       355       365       375     | 385       395       405       415       425    |  435       445       455       465    || 475     | 485       495       505       515       525       535       545       555     
                                                                                                  80-MSE               102-MSE                                141-MSE                   167-MSE                                          216|      242|                                                                           322-MSE            341-MSE                 365-MSE         381-MSE                                          430-MSE                                 470-MSE    481-MSE                                     525-MSE                               
                                                                                                                                                                                                                                          233       244                                                                                                                                                                                                                                471-MSE
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4N5A)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4N5A)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4N5A)

(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

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(-) Related Entries Specified in the PDB File

4n5c