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(-) Description

Title :  CRYSTAL STRUCTURE OF THE BROMO-PWWP OF THE MOUSE ZINC FINGER MYND-TYPE CONTAINING 11 ISOFORM ALPHA
 
Authors :  Y. Li, Y. Ren, H. Li
Date :  08 Oct 13  (Deposition) - 05 Mar 14  (Release) - 16 Apr 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.95
Chains :  Asym./Biol. Unit :  A
Keywords :  Tandem Bromodomain-Zinc Finger-Pwwp Motif, Histone H3. 3-Specific, Transcription (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. Wen, Y. Li, Y. Xi, S. Jiang, S. Stratton, D. Peng, K. Tanaka, Y. Ren, Z. Xia, J. Wu, B. Li, M. C. Barton, W. Li, H. Li, X. Shi
Zmynd11 Links Histone H3. 3K36Me3 To Transcription Elongatio And Tumour Suppression
Nature V. 508 263 2014
PubMed-ID: 24590075  |  Reference-DOI: 10.1038/NATURE13045

(-) Compounds

Molecule 1 - ZINC FINGER MYND DOMAIN-CONTAINING PROTEIN 11
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28A
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 154-371
    Gene: BS69, ZMYND11
    Organism Common: MOUSE
    Organism Scientific: MUS MUSCULUS
    Organism Taxid: 10090
    Synonym: ADENOVIRUS 5 E1A-BINDING PROTEIN, PROTEIN BS69

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1PO41Ligand/IonPHOSPHATE ION
2ZN1Ligand/IonZINC ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARECYS A:258 , CYS A:261 , CYS A:277 , HIS A:281BINDING SITE FOR RESIDUE ZN A 401
2AC2SOFTWAREHIS A:185 , ARG A:268 , HIS A:313 , HIS A:314 , HIS A:315 , HOH A:541BINDING SITE FOR RESIDUE PO4 A 402

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4N4G)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Ile A:278 -Pro A:279

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4N4G)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4N4G)

(-) Exons   (0, 0)

(no "Exon" information available for 4N4G)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:209
                                                                                                                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhh..........hhhhhh....hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhh.......eeeee.....eeeeeeeeee..eeeeee.hhhh.eeeee...eee............hhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4n4g A 154 NKQEMGTYLRFIVSRMKERAIDGKDSKHPMYRRLVHSAVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYGADSEQADIARMLYKDTCHELDELQLCKNCFYLSNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQKEDNQVDVRFFGHHHQRAWIPSENIQDITVNVHRLHVKRSMGWKKACDELELHQRFLREGRFWKSK 366
                                   163       173 ||    187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357         
                                               175|                                                                                                                                                                                          
                                                180
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4N4G)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4N4G)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4N4G)

(-) Gene Ontology  (18, 18)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ZMY11_MOUSE | Q8R5C8: 4n4h 4n4i

(-) Related Entries Specified in the PDB File

4n4h 4n4i