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(-) Description

Title :  CRYSTAL STRUCTURE OF FLG22 IN COMPLEX WITH THE FLS2 AND BAK1 ECTODOMAINS
 
Authors :  J. Chai, Y. Sun, Z. Han
Date :  10 Sep 13  (Deposition) - 04 Dec 13  (Release) - 04 Dec 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.06
Chains :  Asym./Biol. Unit :  A,B,C
Keywords :  Fls2, Bak1, Flg22, Flagellin, Plant Immunity, Leucine-Rich Repeat, Transferase-Transferase Receptor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Sun, L. Li, A. P. Macho, Z. Han, Z. Hu, C. Zipfel, J. M. Zhou, J. Chai
Structural Basis For Flg22-Induced Activation Of The Arabidopsis Fls2-Bak1 Immune Complex.
Science V. 342 624 2013
PubMed-ID: 24114786  |  Reference-DOI: 10.1126/SCIENCE.1243825

(-) Compounds

Molecule 1 - LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FLS2
    Chains: A
    EC Number: 2.7.11.1
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Cell: HIGH FIVE
    Expression System Common: FALL ARMYWORM
    Expression System Taxid: 7108
    Expression System Vector Type: BACULOVIRUS
    Fragment: FLS2-LRR UNP RESIDUES 25-800
    Gene: FLS2, AT5G46330, MPL12.13, MPL12.8
    Organism Common: MOUSE-EAR CRESS,THALE-CRESS
    Organism Scientific: ARABIDOPSIS THALIANA
    Organism Taxid: 3702
    Synonym: PROTEIN FLAGELLIN-SENSING 2, PROTEIN FLAGELLIN-SENSITIVE 2
 
Molecule 2 - BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1
    Chains: B
    EC Number: 2.7.10.1, 2.7.11.1
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Cell: HIGH FIVE
    Expression System Common: FALL ARMYWORM
    Expression System Taxid: 7108
    Expression System Vector Type: BACULOVIRUS
    Fragment: BAK1-LRR UNP RESIDUES 1-220
    Gene: BAK1, ELG, SERK3, AT4G33430, F17M5.190
    Organism Common: MOUSE-EAR CRESS,THALE-CRESS
    Organism Scientific: ARABIDOPSIS THALIANA
    Organism Taxid: 3702
    Synonym: ATBAK1, BRI1-ASSOCIATED RECEPTOR KINASE 1, PROTEIN ELONGATED, SOMATIC EMBRYOGENESIS RECEPTOR KINASE 3, ATSERK3, SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 3
 
Molecule 3 - FLG22
    Chains: C
    Engineered: YES
    Other Details: THIS SEQUENCE IS SYNTHETIC PRODUCE
    Synthetic: YES

 Structural Features

(-) Chains, Units

  123
Asymmetric/Biological Unit : ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 27)

Asymmetric/Biological Unit (2, 27)
No.NameCountTypeFull Name
1NAG11Ligand/IonN-ACETYL-D-GLUCOSAMINE
2SO416Ligand/IonSULFATE ION

(-) Sites  (26, 26)

Asymmetric Unit (26, 26)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHIS A:442 , ASN A:466BINDING SITE FOR RESIDUE NAG A 909
02AC2SOFTWARETHR A:578 , ASN A:602 , HIS B:61BINDING SITE FOR RESIDUE SO4 A 911
03AC3SOFTWAREASP A:159 , PRO A:161 , GLU A:162BINDING SITE FOR RESIDUE SO4 A 912
04AC4SOFTWAREGLU A:446 , LYS A:472BINDING SITE FOR RESIDUE SO4 A 913
05AC5SOFTWARETHR A:64 , GLY A:65BINDING SITE FOR RESIDUE SO4 A 914
06AC6SOFTWARELYS A:183 , SER A:207BINDING SITE FOR RESIDUE SO4 A 915
07AC7SOFTWARETYR A:488 , SER A:512 , SER A:536BINDING SITE FOR RESIDUE SO4 A 916
08AC8SOFTWAREASN A:241 , NAG A:904BINDING SITE FOR RESIDUE SO4 A 917
09AC9SOFTWAREARG A:533 , CYS B:57 , THR B:58BINDING SITE FOR RESIDUE SO4 A 918
10BC1SOFTWARETYR A:488 , HIS A:511 , ARG A:533BINDING SITE FOR RESIDUE SO4 A 919
11BC2SOFTWAREARG A:426 , PRO A:448 , ASP A:449BINDING SITE FOR RESIDUE SO4 A 920
12BC3SOFTWARETHR A:640 , ILE A:641 , PRO A:642 , LYS A:643 , GLU A:644BINDING SITE FOR RESIDUE SO4 A 921
13BC4SOFTWAREGLY A:617BINDING SITE FOR RESIDUE SO4 A 922
14BC5SOFTWAREASN A:361BINDING SITE FOR RESIDUE NAG A 923
15BC6SOFTWAREASN B:26 , ALA B:27BINDING SITE FOR RESIDUE SO4 B 301
16BC7SOFTWAREASN A:602 , ASP B:74 , LEU B:75 , GLY B:76 , TYR B:100BINDING SITE FOR RESIDUE SO4 B 302
17BC8SOFTWARESER B:66BINDING SITE FOR RESIDUE SO4 B 303
18BC9SOFTWAREGLU A:321 , ASN B:26 , VAL B:54 , ALA C:81 , GLY C:82BINDING SITE FOR RESIDUE SO4 C 101
19CC1SOFTWAREASN A:94BINDING SITE FOR MONO-SACCHARIDE NAG A 901 BOUND TO ASN A 94
20CC2SOFTWAREVAL A:192 , HIS A:193 , ASN A:217 , SO4 A:917BINDING SITE FOR MONO-SACCHARIDE NAG A 904 BOUND TO ASN A 217
21CC3SOFTWAREGLU A:259 , ASN A:262BINDING SITE FOR MONO-SACCHARIDE NAG A 905 BOUND TO ASN A 262
22CC4SOFTWAREASN A:347 , ASN A:370 , ASN A:371BINDING SITE FOR MONO-SACCHARIDE NAG A 906 BOUND TO ASN A 371
23CC5SOFTWAREVAL A:364 , ASN A:388 , LYS A:411 , ASP C:79 , ALA C:80 , ALA C:81BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 388 RESIDUES 907 TO 908
24CC6SOFTWAREASN A:406BINDING SITE FOR MONO-SACCHARIDE NAG A 902 BOUND TO ASN A 406
25CC7SOFTWARESER A:564 , ASN A:588BINDING SITE FOR MONO-SACCHARIDE NAG A 910 BOUND TO ASN A 588
26CC8SOFTWARESER A:681 , ASN A:704 , SER A:706 , ARG A:707 , ASP A:728BINDING SITE FOR MONO-SACCHARIDE NAG A 903 BOUND TO ASN A 704

(-) SS Bonds  (3, 3)

Asymmetric/Biological Unit
No.Residues
1A:61 -A:68
2A:165 -A:187
3B:57 -B:64

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Met A:777 -Gly A:778

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4MN8)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4MN8)

(-) Exons   (0, 0)

(no "Exon" information available for 4MN8)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:759
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh.........hhhhhhhh..hhhhh..eee.....eeeee..........hhhhhhh....eee..........hhhhhhh....eee..........hhhhhhh....eee..........hhhhhhh....eee............hhhhh....eee..........hhhhhhh....eee..........hhhhhhh....eee..........hhhhhhh....eee..........hhhhhhh....eee..........hhhhhhh....eee..........hhhhhhh....eee..........hhhhhhh....eee......ee....hhhhh....eee....ee....hhhhhhh....eee....................eee..........hhhhhhh....eee..........hhhhhhh....eee......ee..hhhhhhhh...eee....eeeee.hhhhhhh....eee....eee...hhhhhhh....eee......eee.hhhhhhh....eee....eee...hhhhhhh....eee..........hhhhhhhh.....eee......ee..hhhhh......eee....ee....hhhhhhh....eee..........hhhhhhhh....eee..........hhhhhhh....eee...........hhhhhh....eee...................hhhhhh....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4mn8 A  26 SFEPEIEALKSFKNGISNDPLGVLSDWTIIGSLRHCNWTGITCDSTGHVVSVSLLEKQLEGVLSPAIANLTYLQVLDLTSNSFTGKIPAEIGKLTELNQLILYLNYFSGSIPSGIWELKNIFYLDLRNNLLSGDVPEEICKTSSLVLIGFDYNNLTGKIPECLGDLVHLQMFVAAGNHLTGSIPVSIGTLANLTDLDLSGNQLTGKIPRDFGNLLNLQSLVLTENLLEGDIPAEIGNCSSLVQLELYDNQLTGKIPAELGNLVQLQALRIYKNKLTSSIPSSLFRLTQLTHLGLSENHLVGPISEEIGFLESLEVLTLHSNNFTGEFPQSITNLRNLTVLTVGFNNISGELPADLGLLTNLRNLSAHDNLLTGPIPSSISNCTGLKLLDLSHNQMTGEIPRGFGRMNLTFISIGRNHFTGEIPDDIFNCSNLETLSVADNNLTGTLKPLIGKLQKLRILQVSYNSLTGPIPREIGNLKDLNILYLHSNGFTGRIPREMSNLTLLQGLRMYSNDLEGPIPEEMFDMKLLSVLDLSNNKFSGQIPALFSKLESLTYLSLQGNKFNGSIPASLKSLSLLNTFDISDNLLTGTIPGELLASLKNMQLYLNFSNNLLTGTIPKELGKLEMVQEIDLSNNLFSGSIPRSLQACKNVFTLDFSQNNLSGHIPDEVFQGMDMIISLNLSRNSFSGEIPQSFGNMTHLVSLDLSSNNLTGEIPESLANLSTLKHLKLASNNLKGHVPESGVFKNINASDLMGNTDLCG 784
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725       735       745       755       765       775         


Chain B from PDB  Type:PROTEIN  Length:175
                                                                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhee...hhhhhh............eee.....eeeee......ee..hhhhhhh....eee..........hhhhhhh....eee..........hhhhhh.....eee..........hhhhhh.....ee............................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4mn8 B  26 NAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNNLSGPIPSTLGRLKKLRFLRLNNNSLSGEIPRSLTAVLTLQVLDLSNNPLTGDIPVNGSFSLFTPISFANTKLT 200
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195     


Chain C from PDB  Type:PROTEIN  Length:21
                                                     
               SCOP domains --------------------- SCOP domains
               CATH domains --------------------- CATH domains
               Pfam domains --------------------- Pfam domains
         Sec.struct. author .......hhhhh......... Sec.struct. author
                 SAPs(SNPs) --------------------- SAPs(SNPs)
                    PROSITE --------------------- PROSITE
                 Transcript --------------------- Transcript
                 4mn8 C  65 QRLSTGSRINSAKDDAAGLQI  85
                                    74        84
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4MN8)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4MN8)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4MN8)

(-) Gene Ontology  (28, 42)

Asymmetric/Biological Unit(hide GO term definitions)

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    Met A:777 - Gly A:778   [ RasMol ]  
 

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(-) Related Entries Specified in the PDB File

4mna