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(-) Description

Title :  HEDYCARYOL SYNTHASE IN COMPLEX WITH HEPES
 
Authors :  P. Baer, P. Rabe, C. Cirton, C. Oliveira Mann, N. Kaufmann, M. Groll, J.
Date :  21 Aug 13  (Deposition) - 29 Jan 14  (Release) - 29 Jan 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym./Biol. Unit :  A
Keywords :  Cyclase, Terpenoid, Terpene Alpha Domain Class I, Helix Break, Helix Dipol, Lyase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. Baer, P. Rabe, C. A. Citron, C. C. De Oliveira Mann, N. Kaufmann, M. Groll, J. S. Dickschat
Hedycaryol Synthase In Complex With Nerolidol Reveals Terpene Cyclase Mechanism.
Chembiochem V. 15 213 2014
PubMed-ID: 24399794  |  Reference-DOI: 10.1002/CBIC.201300708

(-) Compounds

Molecule 1 - PUTATIVE SESQUITERPENE CYCLASE
    Chains: A
    EC Number: 4.2.3.-
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28C
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: KSE_00200T, KSE_76540T
    Organism Scientific: KITASATOSPORA SETAE
    Organism Taxid: 452652
    Strain: ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1EPE1Ligand/Ion4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:55 , VAL A:59 , THR A:78 , VAL A:179 , LEU A:184 , GLN A:306 , TRP A:309 , HOH A:1199BINDING SITE FOR RESIDUE EPE A 901

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4MC8)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4MC8)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4MC8)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4MC8)

(-) Exons   (0, 0)

(no "Exon" information available for 4MC8)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:296
                                                                                                                                                                                                                                                                                                                                        
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................hhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhh........hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4mc8 A   3 EFEIPDFYVPFPLECNPHLEEASRAMWEWIDANGLAPTERARDRMRRTGADLSGAYVWPRADLDTLTIGLKWIALTFRIDDQIDEDPARMTAIDELRGTLHGLPVSGRSPTARALGALWQETALGRPATWCDAFIGHFEAFLQTYTTEAGLNLRLDDYLDRRMYSVGMPWLWDLDELRLPIFLPGSVRTCGPMNKLRRAGALHIALVNDVFSVEREQHNAVTIIREAQGCSLQEAVDQVAVLVEAQLHTVLQARQELLEELDRQALPSRAREAAVDYAANVAANLSGQLVWHSSVE 314
                                    12        22        32        42        52        62        72        82     || 98       108       118       128       138       148       158 ||    173       183       193       203       213       223     ||238       248       258       268       278       288       298       308      
                                                                                                                88|                                                              160|                                                            229|                                                                               
                                                                                                                 95                                                               166                                                             235
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4MC8)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4MC8)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4MC8)

(-) Gene Ontology  (1, 1)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        E4MYY0_KITSK | E4MYY0: 4mc0 4mc3

(-) Related Entries Specified in the PDB File

1hm4 N219L PENTALENENE SYNTHASE
4mc0 HEDYCARYOL SYNTHASE APO
4mc3 HEDYCARYOL SYNTHASE IN COMPLEX WITH NEROLIDOL