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(-) Description

Title :  STRUCTURE OF THE P450 OLET WITH A C20 FATTY ACID SUBSTRATE BOUND
 
Authors :  D. Leys
Date :  07 Jun 13  (Deposition) - 27 Nov 13  (Release) - 14 May 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym./Biol. Unit :  A
Keywords :  Cytochrome P450, Peroxygenase, Fatty Acid Decarboxylase, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Belcher, K. J. Mclean, S. Matthews, L. S. Woodward, K. Fisher, S. E. Rigby, D. R. Nelson, D. Potts, M. T. Baynham, D. A. Parker, D. Leys, A. W. Munro
Structure And Biochemical Properties Of The Alkene Producin Cytochrome P450 Oletje (Cyp152L1) From The Jeotgalicoccus Sp. 8456 Bacterium.
J. Biol. Chem. V. 289 6535 2014
PubMed-ID: 24443585  |  Reference-DOI: 10.1074/JBC.M113.527325

(-) Compounds

Molecule 1 - TERMINAL OLEFIN-FORMING FATTY ACID DECARBOXYLASE
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Organism Scientific: JEOTGALICOCCUS SP. ATCC 8456
    Organism Taxid: 946435

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1DCR1Ligand/IonICOSANOIC ACID
2HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETYR A:59 , ARG A:66 , ILE A:84 , HIS A:85 , HIS A:92 , LYS A:96 , PHE A:99 , ASN A:242 , THR A:243 , PRO A:246 , LEU A:247 , ILE A:250 , GLN A:354 , HIS A:363 , CYS A:365 , ALA A:366 , GLY A:367 , ILE A:370 , THR A:371BINDING SITE FOR RESIDUE HEM A 501
2AC2SOFTWARELEU A:78 , ILE A:170 , ARG A:245 , PRO A:246 , PHE A:294 , HOH A:709BINDING SITE FOR RESIDUE DCR A 502

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4L40)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Ile A:402 -Pro A:403

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4L40)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4L40)

(-) Exons   (0, 0)

(no "Exon" information available for 4L40)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:419
                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains d4l40a_ A: automated matches                                                                                                                                                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee.....hhhhhhhhh.hhhhhhhhhhh...eeeee...eeeeeehhhhhhhhhh....ee.....hhhhhhhh....hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh.eeehhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhh........hhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh....eeeeee...eee..eee....eeeeehhhhhh...........hhhhhhh.......................hhhhhhhhhhhhhhhhhhheeee.....................eeeeeee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4l40 A   4 LKRDKGLDNTLKVLKQGYLYTTNQRNRLNTSVFQTKALGGKPFVVVTGKEGAEMFYNNDVVQREGMLPKRIVNTLFGKGAIHTVDGKKHVDRKALFMSLMTEGNLNYVRELTRTLWHANTQRMESMDEVNIYRESIVLLTKVGTRWAGVQAPPEDIERIATDMDIMIDSFRALGGAFKGYKASKEARRRVEDWLEEQIIETRKGNIHPPEGTALYEFAHWEDYLGNPMDSRTCAIDLMNTFRPLIAINRFVSFGLHAMNENPITREKIKSEPDYAYKFAQEVRRYYPFVPFLPGKAKVDIDFQGVTIPAGVGLALDVYGTTHDESLWDDPNEFRPERFETWDGSPFDLIPQGGGDYWTNHRCAGEWITVIIMEETMKYFAEKITYDVPEQDLEVDLNSIPGYVKSGFVIKNVREVVDRT 422
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4L40)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4L40)

(-) Gene Ontology  (5, 5)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

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UniProtKB/TrEMBL
        E9NSU2_9STAP | E9NSU2: 4l54 5m0n 5m0o 5m0p

(-) Related Entries Specified in the PDB File

4l54