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(-) Description

Title :  CRYSTAL STRUCTURE OF A GROEL-ADP COMPLEX IN THE RELAXED ALLOSTERIC STATE
 
Authors :  X. Fei, D. Yang, N. Laronde-Leblanc, G. H. Lorimer
Date :  01 May 13  (Deposition) - 17 Jul 13  (Release) - 13 Nov 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.72
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G
Keywords :  Relaxed Allosteric State, Asymmetrical, Tetradecamer, Homoligomer, Chaperonin, Atpase, Misfolded Protein Binding, Atp/Adp Binding, Groes Binding, Chaperone (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  X. Fei, D. Yang, N. Laronde-Leblanc, G. H. Lorimer
Crystal Structure Of A Groel-Adp Complex In The Relaxed Allosteric State At 2. 7 A Resolution.
Proc. Natl. Acad. Sci. Usa V. 110 E2958 2013
PubMed-ID: 23861496  |  Reference-DOI: 10.1073/PNAS.1311996110

(-) Compounds

Molecule 1 - GROEL PROTEIN
    Chains: A, B, C, D, E, F, G
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PKK233-2
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Gene: BN17_41231, ECS5124, GROEL, GROL, LF82_0923, MOPA
    Mutation: YES
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562
    Strain: K12
    Synonym: 60 KDA CHAPERONIN, PROTEIN CPN60

 Structural Features

(-) Chains, Units

  1234567
Asymmetric/Biological Unit : ABCDEFG

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 53)

Asymmetric/Biological Unit (5, 53)
No.NameCountTypeFull Name
1ADP7Ligand/IonADENOSINE-5'-DIPHOSPHATE
2CA11Ligand/IonCALCIUM ION
3K9Ligand/IonPOTASSIUM ION
4MG7Ligand/IonMAGNESIUM ION
5MPD19Ligand/Ion(4S)-2-METHYL-2,4-PENTANEDIOL

(-) Sites  (51, 51)

Asymmetric Unit (51, 51)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETHR A:30 , LEU A:31 , GLY A:32 , ASP A:87 , GLY A:88 , THR A:89 , THR A:90 , THR A:91 , GLY A:414 , GLY A:415 , TYR A:478 , ASN A:479 , ALA A:480 , ILE A:493 , ASP A:495 , MG A:602 , K A:603 , HOH A:710 , HOH A:711 , HOH A:716 , HOH A:728 , HOH A:750 , HOH A:768BINDING SITE FOR RESIDUE ADP A 601
02AC2SOFTWAREASP A:87 , ADP A:601 , HOH A:710 , HOH A:716 , HOH A:750BINDING SITE FOR RESIDUE MG A 602
03AC3SOFTWARETHR A:30 , LYS A:51 , ADP A:601 , HOH A:720 , HOH A:742 , HOH A:768 , HOH A:770BINDING SITE FOR RESIDUE K A 603
04AC4SOFTWAREGLU A:191 , GLN A:343 , ALA A:373 , HOH A:778BINDING SITE FOR RESIDUE MPD A 604
05AC5SOFTWAREASN A:10 , VAL A:14 , LEU A:17 , LEU A:104 , ALA A:108BINDING SITE FOR RESIDUE MPD A 605
06AC6SOFTWAREGLU A:518 , LEU G:456 , ASN G:457BINDING SITE FOR RESIDUE MPD A 606
07AC7SOFTWAREGLN A:505 , HOH A:789BINDING SITE FOR RESIDUE MPD A 607
08AC8SOFTWAREARG A:36 , GLN A:453 , LEU A:456 , ASN A:457 , GLU B:518BINDING SITE FOR RESIDUE MPD A 608
09AC9SOFTWAREALA A:84 , ALA A:85 , GLY A:86 , HIS A:401 , ARG A:404 , GLU A:408 , LYS A:498BINDING SITE FOR RESIDUE MPD A 609
10BC1SOFTWARELYS A:42 , SER A:43 , HOH B:750 , HOH B:756BINDING SITE FOR RESIDUE CA A 610
11BC2SOFTWAREARG A:445BINDING SITE FOR RESIDUE CA A 611
12BC3SOFTWARETHR B:30 , LEU B:31 , GLY B:32 , PRO B:33 , ASP B:87 , GLY B:88 , THR B:89 , THR B:90 , THR B:91 , GLY B:414 , GLY B:415 , TYR B:478 , ASN B:479 , ALA B:480 , ALA B:481 , ILE B:493 , ASP B:495 , MG B:602 , K B:603 , HOH B:711 , HOH B:733 , HOH B:753 , HOH B:758 , HOH B:761BINDING SITE FOR RESIDUE ADP B 601
13BC4SOFTWAREASP B:87 , ADP B:601 , HOH B:753 , HOH B:757 , HOH B:758BINDING SITE FOR RESIDUE MG B 602
14BC5SOFTWARETHR B:30 , LYS B:51 , ADP B:601 , HOH B:782 , HOH B:783 , HOH B:784BINDING SITE FOR RESIDUE K B 603
15BC6SOFTWAREVAL B:14 , LEU B:104 , LYS B:105 , ALA B:108 , HOH B:776BINDING SITE FOR RESIDUE MPD B 604
16BC7SOFTWAREARG B:36 , LEU B:456 , ASN B:457 , HOH B:787 , GLU C:518BINDING SITE FOR RESIDUE MPD B 605
17BC8SOFTWAREGLU B:102 , ARG B:445BINDING SITE FOR RESIDUE MPD B 607
18BC9SOFTWAREALA B:83 , ALA B:84 , GLY B:86 , HIS B:401 , GLU B:408 , LYS B:498BINDING SITE FOR RESIDUE MPD B 608
19CC1SOFTWAREGLU B:460 , HOH B:778 , HOH B:790 , HOH C:771BINDING SITE FOR RESIDUE CA B 609
20CC2SOFTWARETHR C:30 , LEU C:31 , GLY C:32 , PRO C:33 , ASP C:87 , GLY C:88 , THR C:89 , THR C:90 , THR C:91 , GLY C:414 , GLY C:415 , TYR C:478 , ASN C:479 , ALA C:480 , ALA C:481 , ILE C:493 , ASP C:495 , MG C:602 , K C:603 , HOH C:721 , HOH C:722 , HOH C:736 , HOH C:737 , HOH C:743 , HOH C:766 , HOH C:781BINDING SITE FOR RESIDUE ADP C 601
21CC3SOFTWAREASP C:87 , ADP C:601 , HOH C:736 , HOH C:741 , HOH C:749 , HOH C:781BINDING SITE FOR RESIDUE MG C 602
22CC4SOFTWARETHR C:30 , GLY C:32 , LYS C:51 , ADP C:601 , HOH C:721 , HOH C:766BINDING SITE FOR RESIDUE K C 603
23CC5SOFTWAREVAL C:14 , LEU C:104 , ALA C:108 , HOH C:775BINDING SITE FOR RESIDUE MPD C 604
24CC6SOFTWARETHR D:30 , LEU D:31 , GLY D:32 , PRO D:33 , ASP D:87 , GLY D:88 , THR D:89 , THR D:90 , THR D:91 , ILE D:150 , GLY D:414 , GLY D:415 , TYR D:478 , ASN D:479 , ALA D:480 , ALA D:481 , ILE D:493 , ASP D:495 , MG D:602 , K D:603 , HOH D:709 , HOH D:738 , HOH D:756 , HOH D:757 , HOH D:766 , HOH D:784BINDING SITE FOR RESIDUE ADP D 601
25CC7SOFTWAREASP D:87 , ADP D:601 , HOH D:709 , HOH D:738 , HOH D:756BINDING SITE FOR RESIDUE MG D 602
26CC8SOFTWARETHR D:30 , LYS D:51 , ASN D:153 , ADP D:601 , HOH D:766 , HOH D:767 , HOH D:768 , HOH D:783BINDING SITE FOR RESIDUE K D 603
27CC9SOFTWAREASN D:10 , VAL D:14 , LEU D:17 , LEU D:104 , LYS D:105 , HOH D:770BINDING SITE FOR RESIDUE MPD D 604
28DC1SOFTWAREILE D:175 , THR D:176BINDING SITE FOR RESIDUE MPD D 605
29DC2SOFTWAREASP D:25BINDING SITE FOR RESIDUE MPD D 606
30DC3SOFTWAREHOH C:742 , HOH C:756 , HOH C:774 , HOH C:784 , HOH D:713BINDING SITE FOR RESIDUE CA D 607
31DC4SOFTWARETHR E:30 , LEU E:31 , GLY E:32 , PRO E:33 , ASP E:87 , GLY E:88 , THR E:89 , THR E:90 , THR E:91 , GLY E:414 , GLY E:415 , TYR E:478 , ASN E:479 , ALA E:480 , ALA E:481 , ILE E:493 , ASP E:495 , MG E:602 , K E:603 , HOH E:714 , HOH E:720 , HOH E:731 , HOH E:737 , HOH E:738 , HOH E:747BINDING SITE FOR RESIDUE ADP E 601
32DC5SOFTWAREASP E:87 , ADP E:601 , HOH E:731 , HOH E:737 , HOH E:738BINDING SITE FOR RESIDUE MG E 602
33DC6SOFTWARETHR E:30 , GLY E:32 , ADP E:601 , HOH E:712 , HOH E:713 , HOH E:714BINDING SITE FOR RESIDUE K E 603
34DC7SOFTWAREGLU E:102 , ARG E:445BINDING SITE FOR RESIDUE MPD E 604
35DC8SOFTWAREHOH D:778 , LYS E:65 , HOH E:735BINDING SITE FOR RESIDUE CA E 605
36DC9SOFTWARESER E:43 , HOH E:727 , HOH E:761BINDING SITE FOR RESIDUE CA E 606
37EC1SOFTWAREHOH E:756BINDING SITE FOR RESIDUE CA E 607
38EC2SOFTWARETHR F:30 , LEU F:31 , GLY F:32 , PRO F:33 , ASP F:87 , GLY F:88 , THR F:89 , THR F:90 , THR F:91 , ILE F:150 , ASN F:153 , GLY F:414 , GLY F:415 , TYR F:478 , ASN F:479 , ALA F:480 , ALA F:481 , ILE F:493 , ASP F:495 , MG F:602 , K F:603 , HOH F:706 , HOH F:707 , HOH F:723 , HOH F:737 , HOH F:754BINDING SITE FOR RESIDUE ADP F 601
39EC3SOFTWAREASP F:87 , ADP F:601 , HOH F:706 , HOH F:707 , HOH F:723BINDING SITE FOR RESIDUE MG F 602
40EC4SOFTWARETHR F:30 , LYS F:51 , ADP F:601 , HOH F:743 , HOH F:744 , HOH F:745BINDING SITE FOR RESIDUE K F 603
41EC5SOFTWARETHR F:176 , VAL F:324 , THR F:331BINDING SITE FOR RESIDUE MPD F 604
42EC6SOFTWAREGLU F:460 , GLU F:483 , HOH F:759BINDING SITE FOR RESIDUE K F 605
43EC7SOFTWARETHR G:30 , LEU G:31 , GLY G:32 , PRO G:33 , ASP G:87 , GLY G:88 , THR G:89 , THR G:90 , THR G:91 , GLY G:414 , GLY G:415 , TYR G:478 , ASN G:479 , ALA G:480 , ALA G:481 , ILE G:493 , ASP G:495 , MG G:602 , K G:603 , HOH G:706 , HOH G:712 , HOH G:729 , HOH G:733 , HOH G:761 , HOH G:762 , HOH G:779BINDING SITE FOR RESIDUE ADP G 601
44EC8SOFTWAREASP G:87 , ADP G:601 , HOH G:706 , HOH G:729 , HOH G:733BINDING SITE FOR RESIDUE MG G 602
45EC9SOFTWARETHR G:30 , LYS G:51 , ADP G:601 , HOH G:762 , HOH G:763 , HOH G:765 , HOH G:766BINDING SITE FOR RESIDUE K G 603
46FC1SOFTWARELEU G:17 , LEU G:104 , LYS G:105 , ALA G:108 , HOH G:736 , HOH G:748BINDING SITE FOR RESIDUE MPD G 604
47FC2SOFTWARETYR G:506BINDING SITE FOR RESIDUE MPD G 605
48FC3SOFTWAREHOH A:714 , SER G:43BINDING SITE FOR RESIDUE CA G 606
49FC4SOFTWAREARG G:445BINDING SITE FOR RESIDUE CA G 607
50FC5SOFTWAREGLU G:460 , GLU G:483BINDING SITE FOR RESIDUE K G 608
51FC6SOFTWAREPRO A:113 , HOH A:734 , ARG G:36 , HOH G:725BINDING SITE FOR RESIDUE CA G 609

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4KI8)

(-) Cis Peptide Bonds  (10, 10)

Asymmetric/Biological Unit
No.Residues
1Ile A:270 -Val A:271
2Ala A:383 -Ala A:384
3Ala C:243 -Gly C:244
4Ala D:152 -Asn D:153
5Gly D:182 -Leu D:183
6Ala G:223 -Asp G:224
7Lys G:225 -Lys G:226
8Lys G:226 -Ile G:227
9Ala G:251 -Glu G:252
10Phe G:281 -Gly G:282

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4KI8)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4KI8)

(-) Exons   (0, 0)

(no "Exon" information available for 4KI8)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:524
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeehhhhhhhhhhhhhhhhhhhhh.......eeee.......eee.hhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh..hhhhhhhhhhhhhhhh....eeeee......eeeee.eeee.....hhhhh.......eeee..eeee..........hhhhhhhhhhhh..eeeee...hhhhhhhhhhhhhh....eeeee...hhhhhhhhhhhhhhhhh...............hhhhheeeeeeee....eeeeee..hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhheeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhheee..hhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh...eeee....eeee......eeehhhhhhhhhhhhhhhhhhhheeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ki8 A   2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANAAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDAGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLP 525
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521    


Chain B from PDB  Type:PROTEIN  Length:524
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeehhhhhhhhhhhhhhhhhhhhhhh.....eeee.......eee.hhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh..hhhhhhhhhhhhhhhh....eeeee......eeeee.eeee.....hhhhh.......eeee..eeeeeeeee.hhhhhhhhhhhhhhhhh.eeeeeeee.hhhhhhhhhhhhh....eeeee....hhhhhhhhhhhhhhhh...............hhhhheeeeeeee....eeeeee..hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhheeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhheee..hhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh...eeee....eeee......eeehhhhhhhhhhhhhhhhhhhheeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ki8 B   2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANAAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDAGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLP 525
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521    


Chain C from PDB  Type:PROTEIN  Length:524
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeehhhhhhhhhhhhhhhhhhhhh.......eeee.......eee.hhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh..hhhhhhhhhhhhhhhh...eeeeee......eeeee.eeee..................eee..eeee......hhhhhhhhhhhhhh....eeeee........hhhhhhhhh....eeeee....hhhhhhhhhhhhhhhh....................ee..eeee....eeee....hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhheeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhheee..hhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhh...eeee....eeee......eeehhhhhhhhhhhhhhhhhhhheeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ki8 C   2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANAAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDAGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLP 525
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521    


Chain D from PDB  Type:PROTEIN  Length:524
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeehhhhhhhhhhhhhhhhhhhhh.......eeee.......eee.hhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhh...hhhhhhhhhhhhhhhh....eeee.......eeeee..eee.....hhhhh.......eeee..eeeeeeeee.....hhhhhhhhhhhh..eeeeeeeehhhhhhhhhhhhhh....eeeee...hhhhhhhhhhhhhhhhh....................eeeeeeee....eeeeee..hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh..eeeee....hhhhhhhhhhhhhhhhhhhhhhhhhheee..hhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhh...eeee....eeee......eeehhhhhhhhhhhhhhhhhhhheeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ki8 D   2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANAAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDAGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLP 525
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521    


Chain E from PDB  Type:PROTEIN  Length:524
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeehhhhhhhhhhhhhhhhhhhhhhh.....eeee.......eee.hhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh..hhhhhhhhhhhhhhhh...eeeeee......eeeee..eee.................eeee..eeee...ee.hhhhhhhhhhhhhhh...eeeee.eehhhhhhhhh.........eeeee....hhhhhhhhhhhhhhhh....................eeeeeeee....eeeeee..hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhheeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhheee..hhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh...eeee....eeee......eeehhhhhhhhhhhhhhhhhhhheeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ki8 E   2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANAAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDAGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLP 525
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521    


Chain F from PDB  Type:PROTEIN  Length:524
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeehhhhhhhhhhhhhhhhhhhhh.......eeee.......eee.hhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh..hhhhhhhhhhhhhhhh....eeeee.......eeee.eeee...................ee..eeeeeeeee.....hhhhhhhhhhhh..eeeeeeee.hhhhhhhhhhhhhh...eeeee...hhhhhhhhhhhhhhhhh..ee......hhhhh.....eeeeeeee....eeeeee..hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhheeeeee....hhhhhhhhhhhhhhhhhhhhhhhhheee..hhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhh...eeee....eeee......eeehhhhhhhhhhhhhhhhhhhheeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ki8 F   2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANAAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDAGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLP 525
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521    


Chain G from PDB  Type:PROTEIN  Length:524
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeehhhhhhhhhhhhhhhhhhhhhhh.....eeee.......eee.hhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh..hhhhhhhhhhhhhhhh...eeeee.......eeeee..eee.....hhhhh.......eeee..eee.......hhhhhhhhhhhhhhhhh.eee......hhhhhhhhhhhhh....eee.......hhhhhhhhhhhhhhh....................eeeeeeee....eeeeee..hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhheeeee.....hhhhhhhhhhhhhhhhhhhhhhhhheee..hhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhh....eeee....eeee......eeehhhhhhhhhhhhhhhhhhhheeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ki8 G   2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANAAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDAGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLP 525
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521
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        Q548M1_ECOLX | Q548M1: 4hel 4pkn 4pko

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