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(-) Description

Title :  CRYSTAL STRUCTURE OF E.COLI ENOYL REDUCTASE IN COMPLEX WITH NAD AND AEA16
 
Authors :  H. Subramanya, K. N. Rao, L. Anirudha
Date :  28 Mar 13  (Deposition) - 02 Apr 14  (Release) - 02 Apr 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.20
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Fabi, Ligand Aea16, Enoyl Reductase, Oxidoreductase-Oxidoreductase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. Subramanya, K. N. Rao, L. Anirudha
Crystal Structure Of E. Coli Enoyl Reductase In Complex With Nad And Aea16
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH] FABI
    Chains: A, B
    EC Number: 1.3.1.9
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28A
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: FABI, ENVM, B1288, JW1281
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 83333
    Strain: K12
    Synonym: ENR, NADH-DEPENDENT ENOYL-ACP REDUCTASE

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 4)

Asymmetric/Biological Unit (2, 4)
No.NameCountTypeFull Name
1AE62Ligand/Ion6-{(1E)-3-[3-(3-METHYL-1-BENZOFURAN-2-YL)AZETIDIN-1-YL]-3-OXOPROP-1-EN-1-YL}-1,8-NAPHTHYRIDIN-2(1H)-ONE
2NAD2Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREPHE A:94 , ALA A:95 , GLY A:97 , TYR A:146 , ILE A:153 , PRO A:154 , TYR A:156 , MET A:159 , PRO A:191 , ALA A:196 , GLY A:199 , ILE A:200 , MET A:206 , NAD A:302BINDING SITE FOR RESIDUE AE6 A 301
2AC2SOFTWAREGLY A:13 , VAL A:14 , ALA A:15 , SER A:19 , ILE A:20 , GLN A:40 , CYS A:63 , ASP A:64 , VAL A:65 , SER A:91 , ILE A:92 , GLY A:93 , LEU A:144 , SER A:145 , TYR A:146 , LYS A:163 , ALA A:189 , PRO A:191 , ILE A:192 , THR A:194 , LEU A:195 , ALA A:196 , AE6 A:301BINDING SITE FOR RESIDUE NAD A 302
3AC3SOFTWAREGLY B:13 , ALA B:15 , ILE B:20 , GLN B:40 , CYS B:63 , ASP B:64 , VAL B:65 , SER B:91 , ILE B:92 , GLY B:93 , LEU B:144 , SER B:145 , LYS B:163 , ALA B:189 , GLY B:190 , THR B:194 , LEU B:195 , AE6 B:302BINDING SITE FOR RESIDUE NAD B 301
4AC4SOFTWAREGLY B:93 , PHE B:94 , ALA B:95 , LEU B:100 , ILE B:153 , TYR B:156 , ALA B:196 , NAD B:301BINDING SITE FOR RESIDUE AE6 B 302

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4JX8)

(-) Cis Peptide Bonds  (3, 3)

Asymmetric/Biological Unit
No.Residues
1Gly A:46 -Arg A:47
2Asn A:257 -Glu A:258
3Gly B:97 -Asp B:98

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4JX8)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4JX8)

(-) Exons   (0, 0)

(no "Exon" information available for 4JX8)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:258
                                                                                                                                                                                                                                                                                                  
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .......eeee........hhhhhhhhhhhh..eeeeee.hhhhhhhhhhhhhhh....eee....hhhhhhhhhhhhhh.......eee.....hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeeeeehhhhh.....hhhhhhhhhhhhhhhhhhhhhhh...eeeeeeee....hhhhhh..hhhhhh.............hhhhhhhhhhhhhhhhhh.....eeee..hhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4jx8 A   1 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMNE 258
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250        


Chain B from PDB  Type:PROTEIN  Length:244
                                                                                                                                                                                                                                                                                    
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeee.......hhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhhhhh....eee....hhhhhhhhhhhhhhhh.....eee............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeeeee...........hhhhhhhhhhhhhhhhhhhhhh...eeeeeeee..................hhhhhhhhhhhhhhhhhh....eeeee........... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4jx8 B   2 GFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPITLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMNE 258
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191|| ||  214       224       234       244       254    
                                                                                                                                                                                                                        192| ||                                                 
                                                                                                                                                                                                                         194 ||                                                 
                                                                                                                                                                                                                           196|                                                 
                                                                                                                                                                                                                            209
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4JX8)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4JX8)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4JX8)

(-) Gene Ontology  (14, 14)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Asn A:257 - Glu A:258   [ RasMol ]  
    Gly A:46 - Arg A:47   [ RasMol ]  
    Gly B:97 - Asp B:98   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FABI_ECOLI | P0AEK4: 1c14 1d8a 1dfg 1dfh 1dfi 1i2z 1i30 1lx6 1lxc 1mfp 1qg6 1qsg 2fhs 3pjd 3pje 3pjf 4jqc 5cfz 5cg1 5cg2

(-) Related Entries Specified in the PDB File

4jqc