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(-) Description

Title :  C-TERMINAL DOMAIN OF THE THIOL:DISULFIDE INTERCHANGE PROTEIN DSBD, Q488A MUTANT
 
Authors :  E. Saridakis, D. A. I. Mavridou, C. Redfield
Date :  09 Jan 13  (Deposition) - 25 Dec 13  (Release) - 09 Apr 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.23
Chains :  Asym./Biol. Unit :  A
Keywords :  Thioredoxin, Thiol:Disulfide Oxidoreductase, Bacterial Periplasm, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. A. Mavridou, E. Saridakis, P. Kritsiligkou, E. C. Mozley, S. J. Ferguson, C. Redfield
An Extended Active-Site Motif Controls The Reactivity Of Th Thioredoxin Fold.
J. Biol. Chem. V. 289 8681 2014
PubMed-ID: 24469455  |  Reference-DOI: 10.1074/JBC.M113.513457

(-) Compounds

Molecule 1 - THIOL:DISULFIDE INTERCHANGE PROTEIN DSBD
    Chains: A
    EC Number: 1.8.1.8
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Fragment: C-TERMINAL DOMAIN (UNP RESIDUES 444-565)
    Gene: DSBD, CUTA2, CYCZ, DIPZ, B4136, JW5734
    Mutation: YES
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 83333
    Strain: K12

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4IP6)

(-) Sites  (0, 0)

(no "Site" information available for 4IP6)

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1A:461 -A:464

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Leu A:510 -Pro A:511

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4IP6)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4IP6)

(-) Exons   (0, 0)

(no "Exon" information available for 4IP6)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:121
                                                                                                                                                         
               SCOP domains d4ip6a_ A: automated matches                                                                                              SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....ee..hhhhhhhhhhhh....eeeeee...hhhhhhhhhhh..hhhhhhhh...eeeeee....hhhhhhhhhhhh.....eeeee......hhhhh.....hhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ip6 A 428 HLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLAANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQPGL 548
                                   437       447       457       467       477       487       497       507       517       527       537       547
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4IP6)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4IP6)

(-) Gene Ontology  (16, 16)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Leu A:510 - Pro A:511   [ RasMol ]  
 

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  4ip6
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  DSBD_ECOLI | P36655
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  1.8.1.8
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        DSBD_ECOLI | P36655: 1jpe 1jzd 1l6p 1vrs 1z5y 2fwe 2fwf 2fwg 2fwh 3pfu 4ip1

(-) Related Entries Specified in the PDB File

4ip1 C-TERMINAL DOMAIN OF THE THIOL:DISULFIDE INTERCHANGE PROTEIN DSBD, Q488K MUTANT