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Title :   CRYSTAL STRUCTURE OF A PUTATIVE 3-OXOACYL-[ACYL-CARRIER PROTEIN]REDUCTASE FROM ESCHERICHIA COLI STRAIN CFT073 COMPLEXED WITH NADP+ AT 2.5 A RESOLUTION

Authors :   J. Hou, T. Osinski, H. Zheng, I. Shumilin, I. Shabalin, S. Shatsman, W. F. Anderson, W. Minor, Center For Structural Genomics Of Infe Diseases (Csgid)

Date :   20 Dec 12 (Deposition) - 09 Jan 13 (Release) - 09 Jan 13 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.50

Chains :   Asym./Biol. Unit : A,B,C,D

Keywords :   Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid, Short Chain Dehydrogenase, Fabg, Beta-Ketoacyl-Acyl Carrier Protein Reductase, Rossmann Fold, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   J. Hou, T. Osinski, H. Zheng, I. Shumilin, I. Shabalin, S. Shatsman, W. F. Anderson, W. Minor, Center For Structural Genomics Of Infectious Diseases (Csgid)
Crystal Structure Of A Putative 3-Oxoacyl-[Acyl-Carrier Protein]Reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2. 5 A Resolution
To Be Published
PubMed: search

Molecule 1 - 3-OXOACYL-[ACYL-CARRIER PROTEIN] REDUCTASE
	Chains	:	A, B, C, D
	EC Number	:	1.1.1.100
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PMCSG7
	Expression System Strain	:	BL21-CODONPLUS(DE3)-RIL
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Gene	:	C1187, NT04EC1225
	Mutation	:	YES
	Organism Scientific	:	ESCHERICHIA COLI
	Organism Taxid	:	199310
	Strain	:	CFT073 / ATCC 700928 / UPEC
	Synonym	:	BETA-KETOACYL-ACYL CARRIER PROTEIN REDUCTASE, FABG

		1	2	3	4
Asymmetric/Biological Unit	:	A	B	C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (1, 4)

No.	Name	Count	Type	Full Name
1	NAP	4	Ligand/Ion	NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

Asymmetric Unit (4, 4)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	GLY A:9 , SER A:11 , LYS A:12 , GLY A:13 , ILE A:14 , HIS A:32 , HIS A:34 , ARG A:35 , ASP A:36 , PHE A:59 , ASP A:60 , VAL A:61 , ASN A:87 , ALA A:88 , GLY A:89 , ILE A:90 , THR A:110 , SER A:139 , TYR A:153 , LYS A:157 , PRO A:183 , GLY A:184 , ILE A:186 , THR A:188 , MET A:190 , ILE A:191 , HOH A:2032 , HOH A:2033 , HOH A:2064 , HOH A:2066	BINDING SITE FOR RESIDUE NAP A 1901
2	AC2	SOFTWARE	GLY B:9 , SER B:11 , LYS B:12 , GLY B:13 , ILE B:14 , HIS B:34 , ARG B:35 , ASP B:36 , ASP B:60 , VAL B:61 , ASN B:87 , ALA B:88 , GLY B:89 , ILE B:90 , SER B:139 , SER B:140 , TYR B:153 , LYS B:157 , PRO B:183 , GLY B:184 , LEU B:185 , ILE B:186 , THR B:188 , HOH B:4033 , HOH B:4044 , HOH B:4046	BINDING SITE FOR RESIDUE NAP B 3901
3	AC3	SOFTWARE	GLY C:9 , SER C:11 , LYS C:12 , GLY C:13 , ILE C:14 , HIS C:32 , HIS C:34 , ARG C:35 , ASP C:36 , PHE C:59 , ASP C:60 , VAL C:61 , ASN C:87 , ALA C:88 , GLY C:89 , ILE C:90 , SER C:139 , SER C:140 , TYR C:153 , LYS C:157 , PRO C:183 , GLY C:184 , ILE C:186 , THR C:188 , MET C:190 , ILE C:191 , HOH C:3007 , HOH C:3019	BINDING SITE FOR RESIDUE NAP C 2901
4	AC4	SOFTWARE	GLY D:9 , SER D:11 , LYS D:12 , GLY D:13 , ILE D:14 , HIS D:32 , TYR D:33 , HIS D:34 , ARG D:35 , ASP D:36 , PHE D:59 , ASP D:60 , VAL D:61 , ASN D:87 , ALA D:88 , GLY D:89 , ILE D:90 , SER D:139 , TYR D:153 , LYS D:157 , PRO D:183 , GLY D:184 , ILE D:186 , THR D:188 , MET D:190 , HOH D:5059 , HOH D:5061 , HOH D:5064 , HOH D:5079	BINDING SITE FOR RESIDUE NAP D 4901

(no "SS Bond" information available for 4IIV)

(no "Cis Peptide Bond" information available for 4IIV)

(no "SAP(SNP)/Variant" information available for 4IIV)

(no "PROSITE Motif" information available for 4IIV)

(no "Exon" information available for 4IIV)

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:242
                                                                                                                                                                                                                                                                                  
               SCOP domains d4iiva_ A: automated matches                                                                                                                                                                                                                       SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee....hhhhhhhhhhhhhh..eeeeee..hhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh...eeee........hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh..eeeeee.hhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh...eeeeeeee..........hhhhhhhhhh........hhhhhhhhhhhhhhhhhh.....eeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4iiv A   2 SRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIAGYVTRQVISINGGML 243
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241

Chain B from PDB  Type:PROTEIN  Length:238
                                                                                                                                                                                                                                                                              
               SCOP domains d4iivb_ B: automated matches                                                                                                                                                                                                                   SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee....hhhhhhhhhhhhhh..eeeeee..hhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh...eeee........hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhh...eeeeee.hhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh...eeeeeeee......hhhhhhhhhhh.......hhhhhhhhhhhhhhhhhh.....eeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4iiv B   2 SRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTMEESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIAGYVTRQVISINGGML 243
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181      |195       205       215       225       235        
                                                                                                                                                                                                                    188|                                                  
                                                                                                                                                                                                                     193

Chain C from PDB  Type:PROTEIN  Length:242
                                                                                                                                                                                                                                                                                  
               SCOP domains d4iivc_ C: automated matches                                                                                                                                                                                                                       SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee....hhhhhhhhhhhhhh..eeeeee..hhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh...eeee........hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh..eeeeee.hhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh...eeeeeeee..........hhhhhhhhhhh.......hhhhhhhhhhhhhhhhhh.....eeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4iiv C   2 SRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIAGYVTRQVISINGGML 243
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241

Chain D from PDB  Type:PROTEIN  Length:242
                                                                                                                                                                                                                                                                                  
               SCOP domains d4iivd_ D: automated matches                                                                                                                                                                                                                       SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee....hhhhhhhhhhhhhh..eeeeee..hhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh...eeee........hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhh...eeeeee.hhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh...eeeeeeee..........hhhhhhhhhhh.......hhhhhhhhhhhhhhhhhh.....eeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4iiv D   2 SRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIAGYVTRQVISINGGML 243
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric/Biological Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a/b) (23833)

Fold: NAD(P)-binding Rossmann-fold domains (1604)

Superfamily: NAD(P)-binding Rossmann-fold domains (1604)

Family: automated matches (447)

Protein domain: automated matches (447)

Escherichia coli [TaxId: 199310] (3)

1a	d4iiva_	A:
1b	d4iivb_	B:
1c	d4iivc_	C:
1d	d4iivd_	D:

(no "CATH Domain" information available for 4IIV)

(no "Pfam Domain" information available for 4IIV)

Asymmetric/Biological Unit(hide GO term definitions)

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Asymmetric/Biological Unit
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4iin
4iiu
4ij8	RELATED ID: CSGID-IDP91235 RELATED DB: TARGETTRACK

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Ligands, Modified Residues, Ions (1, 4)

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