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(-) Description

Title :  CRYSTAL STRUCTURE OF A GLUTATHIONE TRANSFERASE FAMILY MEMBER FROM PSEUDOMONAS FLUORESCENS PF-5, TARGET EFI-900011, WITH BOUND GLUTATHIONE
 
Authors :  M. W. Vetting, J. M. Sauder, L. L. Morisco, S. R. Wasserman, S. Sojitra, H S. K. Burley, J. A. Gerlt, S. C. Almo, Enzyme Function Initiative (E
Date :  09 Dec 12  (Deposition) - 26 Dec 12  (Release) - 06 Mar 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Gst, Glutathione S-Transferase, Enzyme Function Initiative, Efi, Structural Genomics, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. W. Vetting, J. M. Sauder, L. L. Morisco, S. R. Wasserman, S. Sojitra, H. J. Imker, S. K. Burley, J. A. Gerlt, S. C. Almo, Enzyme Function Initiative (Efi)
Crystal Structure Of A Glutathione Transferase Family Membe From Pseudomonas Fluorescens Pf-5, Target Ifi-900011, With Bound Glutathione
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - GLUTATHIONE S-TRANSFERASE-LIKE PROTEIN YIBF
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: YIBF, PFL_5710
    Organism Scientific: PSEUDOMONAS FLUORESCENS
    Organism Taxid: 1218948
    Strain: PF-5

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 5)

Asymmetric Unit (3, 5)
No.NameCountTypeFull Name
1GSH1Ligand/IonGLUTATHIONE
2MSE3Mod. Amino AcidSELENOMETHIONINE
3SO41Ligand/IonSULFATE ION
Biological Unit 1 (3, 10)
No.NameCountTypeFull Name
1GSH2Ligand/IonGLUTATHIONE
2MSE6Mod. Amino AcidSELENOMETHIONINE
3SO42Ligand/IonSULFATE ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:153 , PHE A:154 , ARG A:194BINDING SITE FOR RESIDUE SO4 A 301
2AC2SOFTWARESER A:9 , TYR A:11 , SER A:36 , PRO A:37 , GLY A:51 , LYS A:52 , ILE A:53 , PRO A:54 , ASP A:66 , SER A:67 , TYR A:113 , LYS A:134 , HOH A:402 , HOH A:416 , HOH A:436 , HOH A:438BINDING SITE FOR RESIDUE GSH A 302

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4IBP)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Ile A:53 -Pro A:54
2Tyr A:65 -Asp A:66

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4IBP)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4IBP)

(-) Exons   (0, 0)

(no "Exon" information available for 4IBP)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:205
                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhhhhhhhhhhhhh.eeeee........hhhhhh.........ee.....ee.hhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ibp A   0 SLTLFHNPASPYVRKVmVLLHETGQLNRVALQASQLSPVAPDAALNQDNPLGKIPALRLDNGQVLYDSRVILDYLDQQHVGNPLIPRDGSARWRRLTLAALADGImDASVLVRYELALRAPEKHWEQWLDGQRDKIRRALAVLEAEAIAELASHFDIAAISVACALGYLDFRHPDLEWRQDHPQLAAWYFEISQRPSmLATRPPV 204
                                     9      | 19        29        39        49        59        69        79        89        99     | 109       119       129       139       149       159       169       179       189       199     
                                           16-MSE                                                                                  105-MSE                                                                                     197-MSE
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4IBP)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4IBP)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4IBP)

(-) Gene Ontology  (3, 3)

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        Q4K4R5_PSEF5 | Q4K4R5: 4id0 4iji

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4id0