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(-) Description

Title :  CH67 FAB (UNBOUND) FROM THE CH65-67 LINEAGE
 
Authors :  A. G. Schmidt, S. C. Harrison
Date :  15 Oct 12  (Deposition) - 21 Nov 12  (Release) - 16 Jan 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.60
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,N
Biol. Unit 1:  J,N  (1x)
Biol. Unit 2:  A,B  (1x)
Biol. Unit 3:  C,D  (1x)
Biol. Unit 4:  E,F  (1x)
Biol. Unit 5:  G,H  (1x)
Biol. Unit 6:  I,K  (1x)
Keywords :  Fab Fragment, Immune System (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. G. Schmidt, H. Xu, A. R. Khan, T. O'Donnell, S. Khurana, L. R. King, J. Manischewitz, H. Golding, P. Suphaphiphat, A. Carfi, E. C. Settembre, P. R. Dormitzer, T. B. Kepler, R. Zhang, M. A. Moody, B. F. Haynes, H. X. Liao, D. E. Shaw, S. C. Harrison
Preconfiguration Of The Antigen-Binding Site During Affinit Maturation Of A Broadly Neutralizing Influenza Virus Antibody.
Proc. Natl. Acad. Sci. Usa V. 110 264 2013
PubMed-ID: 23175789  |  Reference-DOI: 10.1073/PNAS.1218256109

(-) Compounds

Molecule 1 - CH67 HEAVY CHAIN
    Chains: J, A, C, E, G, I
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: HEK 293
    Expression System Common: HUMAN
    Expression System Taxid: 9606
    Fragment: FAB
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
 
Molecule 2 - CH67 LIGHT CHAIN
    Chains: N, B, D, F, H, K
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: HEK 293
    Expression System Common: HUMAN
    Expression System Taxid: 9606
    Fragment: FAB
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric Unit : ABCDEFGHIJKN
Biological Unit 1 (1x):          J N
Biological Unit 2 (1x): AB          
Biological Unit 3 (1x):   CD        
Biological Unit 4 (1x):     EF      
Biological Unit 5 (1x):       GH    
Biological Unit 6 (1x):         I K 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4HKB)

(-) Sites  (0, 0)

(no "Site" information available for 4HKB)

(-) SS Bonds  (24, 24)

Asymmetric Unit
No.Residues
1A:22 -A:96
2A:153 -A:209
3B:22 -B:87
4B:136 -B:195
5C:22 -C:96
6C:153 -C:209
7D:22 -D:87
8D:136 -D:195
9E:22 -E:96
10E:153 -E:209
11F:22 -F:87
12F:136 -F:195
13G:22 -G:96
14G:153 -G:209
15H:22 -H:87
16H:136 -H:195
17I:22 -I:96
18I:153 -I:209
19J:22 -J:96
20J:153 -J:209
21K:22 -K:87
22K:136 -K:195
23N:22 -N:87
24N:136 -N:195

(-) Cis Peptide Bonds  (16, 16)

Asymmetric Unit
No.Residues
1Phe J:159 -Pro J:160
2Phe A:159 -Pro A:160
3Glu A:161 -Pro A:162
4Phe C:159 -Pro C:160
5Glu C:161 -Pro C:162
6Phe E:159 -Pro E:160
7Glu E:161 -Pro E:162
8Phe G:159 -Pro G:160
9Glu G:161 -Pro G:162
10Phe I:159 -Pro I:160
11Glu I:161 -Pro I:162
12Tyr N:142 -Pro N:143
13Gly B:101 -Gly B:102
14Leu B:180 -Ser B:181
15Tyr D:142 -Pro D:143
16Tyr K:142 -Pro K:143

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4HKB)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4HKB)

(-) Exons   (0, 0)

(no "Exon" information available for 4HKB)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:220
                                                                                                                                                                                                                                                            
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...eee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee......eee.......eeeeee....eeeeee...hhhhheeeeeee.....................eeeee........ee.......eee....eeee.....eeee........eee...ee.....eee.eeeeee........eeeeeeehhhheeeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hkb A   1 QVQLVQSGAEVRKPGASVKVSCKASGYTFTDNYIHWVRQAPGQGLEWMGWIHPNSGATKYAQKFEGWVTMTRDTSISTVYMELSRSRSDDTAVYYCARAGLEPRSVDYYFYGLDVWGQGTAVTVSSASTKGPSVFPLAPSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP 226
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140|      156       166       176       186       196       206       216       226
                                                                                                                                                                     140|                                                                               
                                                                                                                                                                      147                                                                               


Chain B from PDB  Type:PROTEIN  Length:164
                                                                                                                                                                                                    
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eee.....eeeeeee.........eeeee......ee..eeeee...eeeeeee.......eeeeeeeee....eeee...eeee...........eee..hhhhhhh.....eeeeeee.........ee.....eeeeee......eee..eee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hkb B   2 SALTQPPSVSVAPGQTATITCGGNNIGRKRVDWFQQKPGQAPVLVRFSDSNSGTTATLTISRVEAGDEADYYCQVWDSDSDHVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAETTTPSKQSNNKYAASSYLSLTCQVTHEGSTVE 205
                                    11        21        31        41    ||  64        74        84        94       104       114       124       134       144||     170       180  ||   201    
                                                                       46|                                                                                  145|                  183|          
                                                                        60                                                                                   162                   195          


Chain C from PDB  Type:PROTEIN  Length:218
                                                                                                                                                                                                                                                          
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...eee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee......eee.hhhh..eeeee.....eeeeee...hhhhheeeeee......................eeeee........eeee.....ee..eeeeee.....eeee........eee...ee.....eeeeeeeee.........eeeeeeehhhheeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hkb C   1 QVQLVQSGAEVRKPGASVKVSCKASGYTFTDNYIHWVRQAPGQGLEWMGWIHPNSGATKYAQKFEGWVTMTRDTSISTVYMELSRSRSDDTAVYYCARAGLEPRSVDYYFYGLDVWGQGTAVTVSSASTKGPSVFPLAPGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVE 225
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       147       157       167       177       187       197       207       217        
                                                                                                                                                                    139|                                                                              
                                                                                                                                                                     147                                                                              


Chain D from PDB  Type:PROTEIN  Length:179
                                                                                                                                                                                                                   
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeee....eeeeeee.........eeeee......ee...eeeee...eeeeeee........eeeeeeee....eeee...eeeee..........eee...hhhhhh..eeeeeeeeee............ee.....eeeeeeeeehhhhhh................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hkb D   2 SALTQPPSVSVAPGQTATITCGGNNIGRKRVDWFQQKPGQAPVLVERFSDSNSGTTATLTISRVEAGDEADYYCQVWDSDSDHVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVATTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVE 205
                                    11        21        31        41    ||  63        73        83        93       103       113       123       133       143     ||166       176       186       196         
                                                                       46|                                                                                       149|                                          
                                                                        59                                                                                        163                                          


Chain E from PDB  Type:PROTEIN  Length:220
                                                                                                                                                                                                                                                            
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...eee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee......eee.hhhh..eeeee.....eeeeee...hhhhheeeeeee.....................eeeee........eeee......ee..eeeeee.....eeee........eee...ee.....eeeeeeeee.........eeeeeeehhhheeeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hkb E   1 QVQLVQSGAEVRKPGASVKVSCKASGYTFTDNYIHWVRQAPGQGLEWMGWIHPNSGATKYAQKFEGWVTMTRDTSISTVYMELSRSRSDDTAVYYCARAGLEPRSVDYYFYGLDVWGQGTAVTVSSASTKGPSVFPLAPSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP 226
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140|      156       166       176       186       196       206       216       226
                                                                                                                                                                     140|                                                                               
                                                                                                                                                                      147                                                                               


Chain F from PDB  Type:PROTEIN  Length:173
                                                                                                                                                                                                             
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeee....eeeeeee.........eeeee......ee...eeeee...eeeeeee........eeeeeeee....eeee...eeeee..........eee...hhhhhh..eeeeeeeeee........ee.....eeeeeeeeehhhhhh............... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hkb F   2 SALTQPPSVSVAPGQTATITCGGNNIGRKRVDWFQQKPGQAPVLVERFSDSNSGTTATLTISRVEAGDEADYYCQVWDSDSDHVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST 203
                                    11        21        31        41    ||  63        73        83        93       103       113       123       133       143||     170       180       190       200   
                                                                       46|                                                                                  144|                                         
                                                                        59                                                                                   162                                         


Chain G from PDB  Type:PROTEIN  Length:218
                                                                                                                                                                                                                                                          
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...eee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee......eee.......eeeee.....eeeeee...hhhhheeeeeee.....................eeeee........eeee........eeeeee.....eeee........eee...ee.....eeeeeee............eeeeeehhhheeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hkb G   1 QVQLVQSGAEVRKPGASVKVSCKASGYTFTDNYIHWVRQAPGQGLEWMGWIHPNSGATKYAQKFEGWVTMTRDTSISTVYMELSRSRSDDTAVYYCARAGLEPRSVDYYFYGLDVWGQGTAVTVSSASTKGPSVFPLAPSAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP 226
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140|      158       168       178       188       198       208       218        
                                                                                                                                                                     140|                                                                             
                                                                                                                                                                      149                                                                             


Chain H from PDB  Type:PROTEIN  Length:174
                                                                                                                                                                                                              
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......eeee....eeeeeee.........eeeee.....eee...eeeee...eeeeeee........eeeeeeee....eeee...eeeee........eeeee...hhhhhh..eeeeeeeeee..........ee.....eeeeeeeee..................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4hkb H   3 ALTQPPSVSVAPGQTATITCGGNNIGRKRVDWFQQKPGQAPVLVERFSDSNSGTTATLTISRVEAGDEADYYCQVWDSDSDHVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVETTTPSKQSNNKYAASSYLSLTPEQWKSHCQVTHEGSTVEKT 207
                                    12        22        32        42   ||   64        74        84        94       104       114       124       134       144 ||    169       179       189||     203    
                                                                      46|                                                                                    146|                         190|            
                                                                       59                                                                                     162                          195            


Chain I from PDB  Type:PROTEIN  Length:220
                                                                                                                                                                                                                                                            
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...eee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee......eee.......eeeee.....eeeeee...hhhhheeeeeee.....................eeeee........eeee......ee..eeeeee.....eeee........eee...ee.....eeeeeeeee.........eeeeeeehhhheeeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hkb I   1 QVQLVQSGAEVRKPGASVKVSCKASGYTFTDNYIHWVRQAPGQGLEWMGWIHPNSGATKYAQKFEGWVTMTRDTSISTVYMELSRSRSDDTAVYYCARAGLEPRSVDYYFYGLDVWGQGTAVTVSSASTKGPSVFPLAPSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP 226
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140|      156       166       176       186       196       206       216       226
                                                                                                                                                                     140|                                                                               
                                                                                                                                                                      147                                                                               


Chain J from PDB  Type:PROTEIN  Length:218
                                                                                                                                                                                                                                                          
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...eee.....eeeeeeee..hhhhh.eeeeee.....eeeeeee......eee.......eeeee.....eeeeee...hhhhheeeeeee.....................eeeee........eeee....ee..eeeeee.....eeee........eee...ee.....eeeeeeeee.........eeeeeeehhhheeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hkb J   1 QVQLVQSGAEVRKPGASVKVSCKASGYTFTDNYIHWVRQAPGQGLEWMGWIHPNSGATKYAQKFEGWVTMTRDTSISTVYMELSRSRSDDTAVYYCARAGLEPRSVDYYFYGLDVWGQGTAVTVSSASTKGPSVFPLAPTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP 226
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       148       158       168       178       188       198       208       218        
                                                                                                                                                                    139|                                                                              
                                                                                                                                                                     148                                                                              


Chain K from PDB  Type:PROTEIN  Length:182
                                                                                                                                                                                                                      
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeee....eeeeeee.........eeeee.....eee...eeeee...eeeeeee.......eeeeeeeee....eeee...eeeee..........eee...hhhhhh..eeeeeeeeee........eee...ee.....eeeeeeeeehhhhhh.................. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hkb K   2 SALTQPPSVSVAPGQTATITCGGNNIGRKRVDWFQQKPGQAPVLVERFSDSNSGTTATLTISRVEAGDEADYYCQVWDSDSDHVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVGVETTTPSKQSNNKYAASSYLSLTPEQWKSHCQVTHEGSTVEKTVAP 210
                                    11        21        31        41    ||  63        73        83        93       103       113       123       133       143    || 164       174       184     ||198       208  
                                                                       46|                                                                                      148|                           190|               
                                                                        59                                                                                       160                            195               


Chain N from PDB  Type:PROTEIN  Length:193
                                                                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeee....eeeeeee.........eeeee......ee...eeeee...eeeeeee........eeeeeee......eee...eeeee..........eee...hhhhhh..eeeeeeeeee.....eeeeee..ee....eee...ee.....eeeeeeeeehhhhhh..eeee............ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hkb N   2 SALTQPPSVSVAPGQTATITCGGNNIGRKRVDWFQQKPGQAPVLVERFSDSNSGTTATLTISRVEAGDEADYYCQVWDSDSDHVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSSCQVTHEGSTVEKTVAP 210
                                    11        21        31        41    ||  63        73        83        93       103       113       123       133       143       153       163       173       183     ||197       207   
                                                                       46|                                                                                                                               189|                
                                                                        59                                                                                                                                194
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4HKB)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4HKB)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4HKB)

(-) Gene Ontology  (0, 0)

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  Cis Peptide Bonds
    Glu A:161 - Pro A:162   [ RasMol ]  
    Glu C:161 - Pro C:162   [ RasMol ]  
    Glu E:161 - Pro E:162   [ RasMol ]  
    Glu G:161 - Pro G:162   [ RasMol ]  
    Glu I:161 - Pro I:162   [ RasMol ]  
    Gly B:101 - Gly B:102   [ RasMol ]  
    Leu B:180 - Ser B:181   [ RasMol ]  
    Phe A:159 - Pro A:160   [ RasMol ]  
    Phe C:159 - Pro C:160   [ RasMol ]  
    Phe E:159 - Pro E:160   [ RasMol ]  
    Phe G:159 - Pro G:160   [ RasMol ]  
    Phe I:159 - Pro I:160   [ RasMol ]  
    Phe J:159 - Pro J:160   [ RasMol ]  
    Tyr D:142 - Pro D:143   [ RasMol ]  
    Tyr K:142 - Pro K:143   [ RasMol ]  
    Tyr N:142 - Pro N:143   [ RasMol ]  
 
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  4hkb
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    Protein Cavities: castP
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    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
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    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 4HKB)

(-) Related Entries Specified in the PDB File

4hk0 4hk3 4hkx