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Title :   HUMAN HMT1 HNRNP METHYLTRANSFERASE-LIKE PROTEIN 6 (S. CEREVISIAE)

Authors :   A. Dong, H. Zeng, H. He, M. El Bakkouri, C. Bountra, C. H. Arrowsmith, A. M. Edwards, P. J. Brown, H. Wu, Structural Genomics Consortium (

Date :   28 Sep 12 (Deposition) - 17 Oct 12 (Release) - 17 Oct 12 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.97

Chains :   Asym. Unit : A
Biol. Unit 1: A  (2x)

Keywords :   Hrmt1L6, Methyltransferase, S-Adenosyl-L-Homocysteine, Structural Genomics, Structural Genomics Consortium, Sgc, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   H. Zeng, A. Dong, H. He, M. El Bakkouri, C. Bountra, C. H. Arrowsmith, A. M. Edwards, H. Wu
The Crystal Structure Of Human Hmt1 Hnrnp Methyltransferase-Like Protein 6 In Complex With Sah
To Be Published
PubMed: search

Molecule 1 - PROTEIN ARGININE N-METHYLTRANSFERASE 6
	Chains	:	A
	EC Number	:	2.1.1.-, 2.1.1.125
	Engineered	:	YES
	Expression System	:	UNIDENTIFIED BACULOVIRUS
	Expression System Taxid	:	10469
	Expression System Vector Type	:	PLASMID
	Gene	:	PRMT6, HRMT1L6
	Mutation	:	YES
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN METHYLTRANSFERASE- LIKE PROTEIN 6, HISTONE-ARGININE N-METHYLTRANSFERASE PRMT6

		1
Asymmetric Unit	:	A
Biological Unit 1 (2x)	:	A

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (3, 3)

No.	Name	Count	Type	Full Name
1	EDO	1	Ligand/Ion	1,2-ETHANEDIOL
2	GOL	1	Ligand/Ion	GLYCEROL
3	SAH	1	Ligand/Ion	S-ADENOSYL-L-HOMOCYSTEINE

Biological Unit 1 (3, 6)

No.	Name	Count	Type	Full Name
1	EDO	2	Ligand/Ion	1,2-ETHANEDIOL
2	GOL	2	Ligand/Ion	GLYCEROL
3	SAH	2	Ligand/Ion	S-ADENOSYL-L-HOMOCYSTEINE

Asymmetric Unit (3, 3)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	HIS A:57 , MET A:60 , ILE A:61 , ARG A:66 , GLY A:90 , ALA A:91 , ILE A:95 , LEU A:96 , GLU A:112 , ALA A:113 , SER A:114 , PRO A:139 , VAL A:140 , GLU A:141 , MET A:166 , SER A:169 , HOH A:512 , HOH A:528 , HOH A:559 , HOH A:603 , HOH A:634 , HOH A:663	BINDING SITE FOR RESIDUE SAH A 401
2	AC2	SOFTWARE	ARG A:252 , PHE A:253 , ALA A:254 , ARG A:347	BINDING SITE FOR RESIDUE EDO A 402
3	AC3	SOFTWARE	ARG A:249 , GLU A:340 , THR A:342 , LEU A:356 , LEU A:357 , ARG A:358	BINDING SITE FOR RESIDUE GOL A 403

Asymmetric Unit

No.	Residues
1	A:50	-	A:229

Asymmetric Unit

No.	Residues
1	Leu A:185	-	Pro A:186

(no "SAP(SNP)/Variant" information available for 4HC4)

(no "PROSITE Motif" information available for 4HC4)

(no "Exon" information available for 4HC4)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
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	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
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Chain A from PDB  Type:PROTEIN  Length:326
                                                                                                                                                                                                                                                                                                                                                                      
               SCOP domains d4hc4a_ A: automated matches                                                                                                                                                                                                                                                                                                           SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeee....hhhhhhhhhh...eeeeee...hhhhhhhhhhhh.....eeeee...........eeeee............hhhhhhhhhhhheeeeeeee..eeeeeeeee.hhhhhhhhhh..hhhhhhh..hhhhhhhhhhhhhh..eeeee..hhhhh....eeeeeee....hhhhhhhhheeeeeeee....eeeeeeeeeeeeee......eeee...........eeeeeeeeeeee....eeeeeeeeee.......eeeeeeeee.....eeeeeee.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hc4 A  48 YECYSDVSVHEEMIADRVRTDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPASAELFIVPISDQMLEWRLGFWSQVKQHYGVDMSCLEGFATRCLMGHSEIVVQGLSGEDVLARPQRFAQLELSRAGLEQELEAGVGGRFRCSCYGSAPMHGFAIWFQVTFPGGEKPLVLSTSPFHPATHWKQALLYLNEPVQVEQDTDVSGEITLLPSRDNPRRLRVLLRYKVGDQEEKTKDFAMED 375
                                    57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297 ||    309       319       329       339       349       359       369      
                                                                                                                                                                                                                                                                                     299|                                                                         
                                                                                                                                                                                                                                                                                      302

Legend:		→ Mismatch	(orange background)
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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

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Superfamilies( (-)

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Families(

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Protein Domains( (-)

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Organisms( (-)

)

Class: Alpha and beta proteins (a/b) (23833)

Fold: S-adenosyl-L-methionine-dependent methyltransferases (533)

Superfamily: S-adenosyl-L-methionine-dependent methyltransferases (533)

Family: automated matches (94)

Protein domain: automated matches (94)

Human (Homo sapiens) [TaxId: 9606] (7)

d4hc4a_

(no "CATH Domain" information available for 4HC4)

(no "Pfam Domain" information available for 4HC4)

Asymmetric Unit(hide GO term definitions)

Asymmetric Unit
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	Cis Peptide Bonds
		Leu A:185 - Pro A:186	[ RasMol ]

Biological Unit
	Complete Structure
		Biological Unit 1	[ Jena3D ]

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Description

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Ligands, Modified Residues, Ions (3, 3)

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SS Bonds (1, 1)

Cis Peptide Bonds (1, 1)

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