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(-) Description

Title :  CRYSTAL STRUCTURE OF THE CYTOCHROME B6F COMPLEX FROM MASTIGOCLADUS LAMINOSUS WITH TDS
 
Authors :  S. S. Hasan, E. Yamashita, D. Baniulis, W. A. Cramer
Date :  10 Sep 12  (Deposition) - 13 Feb 13  (Release) - 03 Apr 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.07
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,B,C,D,E,F,G,H  (2x)
Keywords :  Alpha Helix, Beta Sheet, Plastoquinol-Plastocyanin Oxidoreductase, Plastocyanin, Thylakoid Membrane, Photosynthesis (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. S. Hasan, E. Yamashita, D. Baniulis, W. A. Cramer
Quinone-Dependent Proton Transfer Pathways In The Photosynthetic Cytochrome B6F Complex
Proc. Natl. Acad. Sci. Usa V. 110 4297 2013
PubMed-ID: 23440205  |  Reference-DOI: 10.1073/PNAS.1222248110

(-) Compounds

Molecule 1 - CYTOCHROME B6
    Chains: A
    Organism Common: FISCHERELLA SP.
    Organism Scientific: MASTIGOCLADUS LAMINOSUS
    Organism Taxid: 83541
 
Molecule 2 - CYTOCHROME B6-F COMPLEX SUBUNIT 4
    Chains: B
    Organism Common: FISCHERELLA SP.
    Organism Scientific: MASTIGOCLADUS LAMINOSUS
    Organism Taxid: 83541
    Synonym: 17 KDA POLYPEPTIDE
 
Molecule 3 - APOCYTOCHROME F
    Chains: C
    Organism Common: FISCHERELLA SP.
    Organism Scientific: MASTIGOCLADUS LAMINOSUS
    Organism Taxid: 83541
 
Molecule 4 - CYTOCHROME B6-F COMPLEX IRON-SULFUR SUBUNIT
    Chains: D
    EC Number: 1.10.9.1
    Organism Common: FISCHERELLA SP.
    Organism Scientific: MASTIGOCLADUS LAMINOSUS
    Organism Taxid: 83541
 
Molecule 5 - CYTOCHROME B6-F COMPLEX SUBUNIT 6
    Chains: E
    Organism Common: FISCHERELLA SP.
    Organism Scientific: MASTIGOCLADUS LAMINOSUS
    Organism Taxid: 83541
    Synonym: CYTOCHROME B6-F COMPLEX SUBUNIT PETL, CYTOCHROME B6-F COMPLEX SUBUNIT VI
 
Molecule 6 - CYTOCHROME B6-F COMPLEX SUBUNIT 7
    Chains: F
    Organism Common: FISCHERELLA SP.
    Organism Scientific: MASTIGOCLADUS LAMINOSUS
    Organism Taxid: 83541
    Synonym: CYTOCHROME B6-F COMPLEX SUBUNIT PETM, CYTOCHROME B6-F COMPLEX SUBUNIT VII
 
Molecule 7 - CYTOCHROME B6-F COMPLEX SUBUNIT 5
    Chains: G
    Organism Common: FISCHERELLA SP.
    Organism Scientific: MASTIGOCLADUS LAMINOSUS
    Organism Taxid: 83541
    Synonym: CYTOCHROME B6-F COMPLEX SUBUNIT PETG, CYTOCHROME B6-F COMPLEX SUBUNIT V
 
Molecule 8 - CYTOCHROME B6-F COMPLEX SUBUNIT 8
    Chains: H
    Organism Common: FISCHERELLA SP.
    Organism Scientific: MASTIGOCLADUS LAMINOSUS
    Organism Taxid: 83541
    Synonym: CYTOCHROME B6-F COMPLEX SUBUNIT PETN, CYTOCHROME B6-F COMPLEX SUBUNIT VIII

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (2x): ABCDEFGH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (13, 19)

Asymmetric Unit (13, 19)
No.NameCountTypeFull Name
17PH1Ligand/Ion(1R)-2-(DODECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYLTETRADECANOATE
28K61Ligand/IonOCTADECANE
3BCR1Ligand/IonBETA-CAROTENE
4CD1Ligand/IonCADMIUM ION
5CLA1Ligand/IonCHLOROPHYLL A
6FES1Ligand/IonFE2/S2 (INORGANIC) CLUSTER
7HEM4Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
8MYS1Ligand/IonPENTADECANE
9OCT1Ligand/IonN-OCTANE
10OPC2Ligand/Ion(7R,17E)-4-HYDROXY-N,N,N,7-TETRAMETHYL-7-[(8E)-OCTADEC-8-ENOYLOXY]-10-OXO-3,5,9-TRIOXA-4-PHOSPHAHEPTACOS-17-EN-1-AMINIUM 4-OXIDE
11SQD1Ligand/Ion1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
12TDS2Ligand/Ion8-HYDROXY-5,7-DIMETHOXY-3-METHYL-2-TRIDECYL-4H-CHROMEN-4-ONE
13UMQ2Ligand/IonUNDECYL-MALTOSIDE
Biological Unit 1 (12, 36)
No.NameCountTypeFull Name
17PH2Ligand/Ion(1R)-2-(DODECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYLTETRADECANOATE
28K62Ligand/IonOCTADECANE
3BCR2Ligand/IonBETA-CAROTENE
4CD-1Ligand/IonCADMIUM ION
5CLA2Ligand/IonCHLOROPHYLL A
6FES2Ligand/IonFE2/S2 (INORGANIC) CLUSTER
7HEM8Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
8MYS2Ligand/IonPENTADECANE
9OCT2Ligand/IonN-OCTANE
10OPC4Ligand/Ion(7R,17E)-4-HYDROXY-N,N,N,7-TETRAMETHYL-7-[(8E)-OCTADEC-8-ENOYLOXY]-10-OXO-3,5,9-TRIOXA-4-PHOSPHAHEPTACOS-17-EN-1-AMINIUM 4-OXIDE
11SQD2Ligand/Ion1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
12TDS4Ligand/Ion8-HYDROXY-5,7-DIMETHOXY-3-METHYL-2-TRIDECYL-4H-CHROMEN-4-ONE
13UMQ4Ligand/IonUNDECYL-MALTOSIDE

(-) Sites  (18, 18)

Asymmetric Unit (18, 18)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:75 , HOH A:401 , HIS C:143 , HOH C:401BINDING SITE FOR RESIDUE CD A 301
02AC2SOFTWAREPHE A:44 , GLN A:47 , GLY A:51 , PHE A:52 , MET A:54 , ARG A:83 , HIS A:86 , ARG A:87 , MET A:93 , PHE A:131 , GLY A:135 , LEU A:138 , PRO A:139 , HIS A:187 , PHE A:189BINDING SITE FOR RESIDUE HEM A 302
03AC3SOFTWARETYR A:34 , GLY A:37 , GLY A:38 , THR A:40 , MET A:93 , MET A:97 , HIS A:100 , VAL A:101 , ARG A:103 , GLY A:109 , ARG A:114 , THR A:117 , TRP A:118 , GLY A:121 , VAL A:122 , HIS A:202 , PHE A:203 , ILE A:206 , ILE A:211 , SER A:212 , HEM A:304 , HOH A:402 , HOH A:403BINDING SITE FOR RESIDUE HEM A 303
04AC4SOFTWARETYR A:34 , CYS A:35 , GLY A:38 , LEU A:41 , ILE A:206 , ARG A:207 , GLY A:210 , ILE A:211 , HEM A:303 , HOH A:402 , HOH A:407 , HOH A:408 , ASN B:25 , PHE B:40 , TDS B:201 , ARG H:26BINDING SITE FOR RESIDUE HEM A 304
05AC5SOFTWAREMET A:92 , CYS B:50 , PRO C:37 , GLN C:38 , TYR E:8 , GLU F:3 , GLU F:4 , TYR F:7 , ALA F:8 , LEU G:5 , LEU G:9 , BCR G:101 , VAL H:5 , TRP H:8 , LEU H:12 , PHE H:15BINDING SITE FOR RESIDUE OPC A 305
06AC6SOFTWARELEU A:169BINDING SITE FOR RESIDUE MYS A 306
07AC7SOFTWAREVAL A:197BINDING SITE FOR RESIDUE 8K6 A 307
08AC8SOFTWAREASN A:3 , GLN A:15 , UMQ B:202BINDING SITE FOR RESIDUE UMQ A 308
09AC9SOFTWARETYR A:136 , ALA A:147 , ILE A:150 , LEU B:76 , PRO B:77 , LEU B:81 , PHE B:85 , LEU B:88 , CYS D:128 , HIS D:129BINDING SITE FOR RESIDUE TDS A 309
10BC1SOFTWARELYS A:24 , ARG A:207 , HEM A:304 , ALA B:31 , ASP B:35 , LEU B:36 , LEU B:37 , PHE B:40 , PRO B:41BINDING SITE FOR RESIDUE TDS B 201
11BC2SOFTWARETHR A:22 , UMQ A:308 , TRP B:32 , SQD D:201BINDING SITE FOR RESIDUE UMQ B 202
12BC3SOFTWAREILE A:98 , TYR A:105 , TYR B:80 , PRO B:83 , VAL B:84 , MET B:101 , LEU B:108 , ILE B:132 , PHE B:133 , GLY B:136 , THR B:140 , OPC B:204 , HOH B:301 , HOH B:303 , HOH B:304BINDING SITE FOR RESIDUE CLA B 203
13BC4SOFTWARELEU B:100 , VAL B:111 , GLU B:115 , ASN B:118 , ARG B:126 , PRO B:127 , VAL B:128 , ALA B:129 , ILE B:132 , CLA B:203BINDING SITE FOR RESIDUE OPC B 204
14BC5SOFTWARETRP C:257 , GLY D:33 , ALA D:34 , TYR D:36BINDING SITE FOR RESIDUE 7PH C 301
15BC6SOFTWARETYR C:1 , PRO C:2 , TRP C:4 , ALA C:5 , CYS C:22 , CYS C:25 , HIS C:26 , GLN C:60 , LEU C:70 , ASN C:71 , VAL C:72 , GLY C:73 , ALA C:74 , VAL C:75 , ASN C:154 , GLY C:156 , ARG C:157 , GLY C:158 , ILE C:160 , TYR C:161BINDING SITE FOR RESIDUE HEM C 302
16BC7SOFTWARETRP B:32 , PRO B:33 , TYR B:38 , UMQ B:202 , LYS C:275 , VAL C:279 , ARG D:16 , ASN D:20 , GLY D:25BINDING SITE FOR RESIDUE SQD D 201
17BC8SOFTWARECYS D:108 , HIS D:110 , LEU D:111 , CYS D:126 , HIS D:129 , GLY D:130BINDING SITE FOR RESIDUE FES D 202
18BC9SOFTWAREILE A:39 , MET A:96 , OPC A:305 , ILE F:16 , PHE F:17 , ALA G:16 , GLY G:19 , GLY G:20 , ILE H:19BINDING SITE FOR RESIDUE BCR G 101

(-) SS Bonds  (2, 2)

Asymmetric Unit
No.Residues
1D:108 -D:126
2D:113 -D:128

(-) Cis Peptide Bonds  (3, 3)

Asymmetric Unit
No.Residues
1Trp B:32 -Pro B:33
2Gly C:117 -Pro C:118
3Gly D:142 -Pro D:143

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4H13)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4H13)

(-) Exons   (0, 0)

(no "Exon" information available for 4H13)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:215
                                                                                                                                                                                                                                                       
               SCOP domains d4h13a_ A: automated matches                                                                                                                                                                                            SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhh..ee....hhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhh..hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4h13 A   1 MANVYDWFQERLEIQALADDVTSKYVPPHVNIFYCLGGITLTCFLIQFATGFAMTFYYKPTVTEAYASVQYIMNEVSFGWLIRSIHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWISGVILAVITVSFGVTGYSLPWDQVGYWAVKIVSGVPEAIPVVGVLISDLLRGGSSVGQATLTRYYSAHTFVLPWLIAVFMLLHFLMIRKQGISGPL 215
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210     


Chain B from PDB  Type:PROTEIN  Length:160
                                                                                                                                                                                                
               SCOP domains d4h13b_ B: Subunit IV of the cytochrome b6f complex                                                                                                              SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhhhh.......ee........hhhhhhhhhhhhhhhhhhhh...................hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhh........... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4h13 B   1 MATLKKPDLSDPKLRAKLAKGMGHNYYGEPAWPNDLLYVFPVVIMGTFACIVALSVLDPAMVGEPADPFATPLEILPEWYLYPVFQILRSVPNKLLGVLLMASVPLGLILVPFIENVNKFQNPFRRPVATTIFLFGTLVTIWLGIGATFPLDKTLTLGLF 160
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160


Chain C from PDB  Type:PROTEIN  Length:288
                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhh..........hhhhhh.......eee...ee....eeeeeee...................eeeeeee.....ee......hhhhhhhhh....ee.......eeeeeeee.....eeeeeee............eeeeeeeeeee........................................eee.........eee............................eeeeeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4h13 C   1 YPFWAQQTYPPTPREPTGRIVCANCHLAAKPAEVEVPQSVLPDTVFKAVVKIPYDTKLQQVAADGSKVGLNVGAVLMLPEGFKIAPEERIPEELKKEVGDVYFQPYKEGQDNVLLVGPLPGEQYQEIVFPVLSPNPTTDKNIHFGKYAIHLGANRGRGQIYPTGEKSNNNVFTASATGTITKIAKEEDEYGNVKYQVSIQTDSGKTVVDTIPAGPELIVSEGQAVKAGEALTNNPNVGGFGQDDTEIVLQDPNRVKWMIAFICLVMLAQLMLILKKKQVEKVQAAEMN 288
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280        


Chain D from PDB  Type:PROTEIN  Length:168
                                                                                                                                                                                                        
               SCOP domains d4h13d1 D:9-45 automated matches     d4h13d2 D:46-179 automated matches                                                                                                  SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...................hhhhhhhh....ee...hhhhh.eeee...........ee...........ee....eee......ee.................eeee......eeee............... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4h13 D   9 DVPDMGRRQFMNLLAFGTVTGVALGALYPLVKYFIPPSGGAVTTAKDKLGNNVKVSKFLESHNAGDRVLVQGLKGDPTYIVVESKEAIRDYGINAVCTHLGCVVPWNAAENKFKCPCHGSQYDETGKVIRGPAPLSLALCHATVQDDNIVLTPWTETDFRTGEKPWWV 179
                                    18        28        38        48 ||     61        71        81        91       101       111       121       131       141       151       161       171        
                                                                    50|                                                                                                                             
                                                                     54                                                                                                                             


Chain E from PDB  Type:PROTEIN  Length:32
                                                                
               SCOP domains -------------------------------- SCOP domains
               CATH domains -------------------------------- CATH domains
               Pfam domains -------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------- PROSITE
                 Transcript -------------------------------- Transcript
                 4h13 E   1 MILGAVFYIVFIALFFGIAVGIIFAIKSIKLI  32
                                    10        20        30  


Chain F from PDB  Type:PROTEIN  Length:31
                                                               
               SCOP domains d4h13f_ F:                      SCOP domains
               CATH domains ------------------------------- CATH domains
               Pfam domains ------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------- PROSITE
                 Transcript ------------------------------- Transcript
                 4h13 F   2 TEEMLYAALLSFGLIFVGWGLGVLLLKIQGA  32
                                    11        21        31 


Chain G from PDB  Type:PROTEIN  Length:37
                                                                     
               SCOP domains d4h13g_ G: automated matches          SCOP domains
               CATH domains ------------------------------------- CATH domains
               Pfam domains ------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------- PROSITE
                 Transcript ------------------------------------- Transcript
                 4h13 G   1 MVEPLLDGLVLGLVFATLGGLFYAAYQQYKRPNELGG  37
                                    10        20        30       


Chain H from PDB  Type:PROTEIN  Length:29
                                                             
               SCOP domains d4h13h_ H: automated matches  SCOP domains
               CATH domains ----------------------------- CATH domains
               Pfam domains ----------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------- SAPs(SNPs)
                    PROSITE ----------------------------- PROSITE
                 Transcript ----------------------------- Transcript
                 4h13 H   1 MEIDVLGWVALLVVFTWSIAMVVWGRNGL  29
                                    10        20
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (7, 7)

Asymmetric Unit
(-)
Class: All beta proteins (24004)
(-)
Class: Membrane and cell surface proteins and peptides (2046)
(-)
Fold: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (46)
(-)
Fold: Heme-binding four-helical bundle (113)
(-)
Fold: Single transmembrane helix (568)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4H13)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4H13)

(-) Gene Ontology  (23, 85)

Asymmetric Unit(hide GO term definitions)

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  Cis Peptide Bonds
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  4h13
    Family and Domain Information: ProDom | SYSTERS
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  CYB6_MASLA | P83791
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    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  CYF_MASLA | P83793
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  PETD_MASLA | P83792
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  PETG_MASLA | P83797
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  PETL_MASLA | P83795
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  PETM_MASLA | P83796
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  PETN_MASLA | P83798
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
  UCRI_MASLA | P83794
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  1.10.9.1
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
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  (no 'MIM ID' available)
    Disease Information: OMIM
 
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  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  CYB6_MASLA | P83791
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  CYF_MASLA | P83793
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  PETD_MASLA | P83792
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  PETG_MASLA | P83797
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  PETL_MASLA | P83795
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  PETM_MASLA | P83796
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  PETN_MASLA | P83798
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  UCRI_MASLA | P83794
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CYB6_MASLA | P83791: 1vf5 2d2c 2e74 2e75 2e76 4h0l 4i7z 4pv1
        CYF_MASLA | P83793: 1vf5 2d2c 2e74 2e75 2e76 4h0l 4i7z 4pv1
        PETD_MASLA | P83792: 1vf5 2d2c 2e74 2e75 2e76 4h0l 4i7z 4pv1
        PETG_MASLA | P83797: 1vf5 2d2c 2e74 2e75 2e76 4h0l 4i7z 4pv1
        PETL_MASLA | P83795: 1vf5 2d2c 2e74 2e75 2e76 4h0l 4i7z 4pv1
        PETM_MASLA | P83796: 1vf5 2d2c 2e74 2e75 2e76 4h0l 4i7z 4pv1
        PETN_MASLA | P83798: 1vf5 2d2c 2e74 2e75 2e76 4h0l 4i7z 4pv1
        UCRI_MASLA | P83794: 1vf5 2d2c 2e74 2e75 2e76 4h0l 4i7z 4pv1

(-) Related Entries Specified in the PDB File

1q90 1vf5 2e76 4h0l 4h44