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(-) Description

Title :  MERKEL CELL POLYOMAVIRUS VP1 IN COMPLEX WITH GD1A OLIGOSACCHARIDE
 
Authors :  U. Neu, H. Hengel, T. Stehle
Date :  17 Jun 12  (Deposition) - 05 Sep 12  (Release) - 05 Sep 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T
Biol. Unit 1:  A,B,C,D,E  (1x)
Biol. Unit 2:  F,G,H,I,J  (1x)
Biol. Unit 3:  K,L,M,N,O  (1x)
Biol. Unit 4:  P,Q,R,S,T  (1x)
Biol. Unit 5:  A (1x),B (1x),C (1x),D (1x),E (1x),K (1x),L (1x),M (1x),N (1x),O (1x)
Biol. Unit 6:  F (1x),G (1x),H (1x),I (1x),J (1x),P (1x),Q (1x),R (1x),S (1x),T (1x)
Keywords :  Viral Capsid Protein, Jelly Roll, Encapsidation, Receptor Binding, Sialylated Oligosaccharides, Viral Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  U. Neu, H. Hengel, B. S. Blaum, R. M. Schowalter, D. Macejak, M. Gilbert W. W. Wakarchuk, A. Imamura, H. Ando, M. Kiso, N. Arnberg, R. L. Garcea, T. Peters, C. B. Buck, T. Stehle
Structures Of Merkel Cell Polyomavirus Vp1 Complexes Define A Sialic Acid Binding Site Required For Infection.
Plos Pathog. V. 8 02738 2012
PubMed-ID: 22910713  |  Reference-DOI: 10.1371/JOURNAL.PPAT.1002738

(-) Compounds

Molecule 1 - VP1
    Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: VP1
    Organism Scientific: MERKEL CELL POLYOMAVIRUS
    Organism Taxid: 493803
    Strain: W162

 Structural Features

(-) Chains, Units

  1234567891011121314151617181920
Asymmetric Unit : ABCDEFGHIJKLMNOPQRST
Biological Unit 1 (1x): ABCDE               
Biological Unit 2 (1x):      FGHIJ          
Biological Unit 3 (1x):           KLMNO     
Biological Unit 4 (1x):                PQRST
Biological Unit 5 (1x): A (1x)B (1x)C (1x)D (1x)E (1x)     K (1x)L (1x)M (1x)N (1x)O (1x)     
Biological Unit 6 (1x):      F (1x)G (1x)H (1x)I (1x)J (1x)     P (1x)Q (1x)R (1x)S (1x)T (1x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 41)

Asymmetric Unit (4, 41)
No.NameCountTypeFull Name
1CL20Ligand/IonCHLORIDE ION
2GAL6Ligand/IonBETA-D-GALACTOSE
3GOL8Ligand/IonGLYCEROL
4SIA7Ligand/IonO-SIALIC ACID
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2GAL-1Ligand/IonBETA-D-GALACTOSE
3GOL2Ligand/IonGLYCEROL
4SIA-1Ligand/IonO-SIALIC ACID
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2GAL-1Ligand/IonBETA-D-GALACTOSE
3GOL-1Ligand/IonGLYCEROL
4SIA1Ligand/IonO-SIALIC ACID
Biological Unit 3 (3, 9)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2GAL3Ligand/IonBETA-D-GALACTOSE
3GOL3Ligand/IonGLYCEROL
4SIA3Ligand/IonO-SIALIC ACID
Biological Unit 4 (3, 9)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2GAL3Ligand/IonBETA-D-GALACTOSE
3GOL3Ligand/IonGLYCEROL
4SIA3Ligand/IonO-SIALIC ACID
Biological Unit 5 (3, 9)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2GAL3Ligand/IonBETA-D-GALACTOSE
3GOL3Ligand/IonGLYCEROL
4SIA3Ligand/IonO-SIALIC ACID
Biological Unit 6 (3, 9)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2GAL3Ligand/IonBETA-D-GALACTOSE
3GOL3Ligand/IonGLYCEROL
4SIA3Ligand/IonO-SIALIC ACID

(-) Sites  (41, 41)

Asymmetric Unit (41, 41)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASN A:162 , HIS A:164 , GLN A:248 , PRO A:254 , THR A:255 , VAL A:256 , CL A:402BINDING SITE FOR RESIDUE GOL A 401
02AC2SOFTWAREHIS A:164 , SER A:246 , ILE A:247 , GOL A:401BINDING SITE FOR RESIDUE CL A 402
03AC3SOFTWAREHIS B:164 , SER B:246 , HOH B:760 , HOH B:765BINDING SITE FOR RESIDUE CL B 601
04AC4SOFTWAREASN C:162 , HIS C:164 , GLN C:248 , PRO C:254 , THR C:255 , VAL C:256 , CL C:402 , HOH C:514BINDING SITE FOR RESIDUE GOL C 401
05AC5SOFTWAREHIS C:164 , SER C:246 , ILE C:247 , GOL C:401 , HOH C:550BINDING SITE FOR RESIDUE CL C 402
06AC6SOFTWAREHIS D:164 , SER D:246 , ILE D:247 , HOH D:779 , HOH D:783BINDING SITE FOR RESIDUE CL D 601
07AC7SOFTWAREHIS E:164 , SER E:246 , ILE E:247 , HOH E:777 , HOH E:781BINDING SITE FOR RESIDUE CL E 601
08AC8SOFTWAREHIS F:164 , SER F:246 , ILE F:247 , HOH F:772BINDING SITE FOR RESIDUE CL F 601
09AC9SOFTWAREHIS G:164 , SER G:246 , ILE G:247 , HOH G:770 , HOH G:773BINDING SITE FOR RESIDUE CL G 601
10BC1SOFTWARETRP H:76 , ASP H:82 , LYS H:295 , SER H:297 , LYS H:299BINDING SITE FOR RESIDUE SIA H 401
11BC2SOFTWAREASN H:162 , HIS H:164 , SER H:246 , ILE H:247BINDING SITE FOR RESIDUE CL H 402
12BC3SOFTWAREHIS I:164 , SER I:246 , ILE I:247 , GLN I:248 , HOH I:740 , HOH I:743BINDING SITE FOR RESIDUE CL I 601
13BC4SOFTWAREHIS J:164 , SER J:246 , ILE J:247 , HOH J:749 , HOH J:751BINDING SITE FOR RESIDUE CL J 601
14BC5SOFTWARETRP K:76 , ASP K:82 , LYS K:295 , SER K:297 , LYS K:299 , GAL K:402 , HOH K:578 , HOH K:579BINDING SITE FOR RESIDUE SIA K 401
15BC6SOFTWARESIA K:401BINDING SITE FOR RESIDUE GAL K 402
16BC7SOFTWAREASN K:162 , HIS K:164 , GLN K:248 , PRO K:254 , THR K:255 , VAL K:256 , CL K:404 , HOH K:529BINDING SITE FOR RESIDUE GOL K 403
17BC8SOFTWAREHIS K:164 , SER K:246 , ILE K:247 , GOL K:403 , HOH K:580BINDING SITE FOR RESIDUE CL K 404
18BC9SOFTWAREHIS L:164 , SER L:246 , ILE L:247 , HOH L:529BINDING SITE FOR RESIDUE CL L 401
19CC1SOFTWARETRP M:76 , ASP M:82 , LYS M:295 , SER M:297 , LYS M:299 , GAL M:402 , HOH M:535 , HOH M:592BINDING SITE FOR RESIDUE SIA M 401
20CC2SOFTWARESIA M:401 , HOH M:591BINDING SITE FOR RESIDUE GAL M 402
21CC3SOFTWAREASN M:162 , HIS M:164 , GLN M:248 , PRO M:254 , THR M:255 , VAL M:256 , CL M:404 , HOH M:551BINDING SITE FOR RESIDUE GOL M 403
22CC4SOFTWAREHIS M:164 , SER M:246 , ILE M:247 , GLN M:248 , GOL M:403 , HOH M:589BINDING SITE FOR RESIDUE CL M 404
23CC5SOFTWARESER D:88 , ASP N:82 , LYS N:295BINDING SITE FOR RESIDUE GOL N 401
24CC6SOFTWAREHIS N:164 , SER N:246 , ILE N:247 , HOH N:557 , HOH N:596BINDING SITE FOR RESIDUE CL N 402
25CC7SOFTWARETRP O:76 , TYR O:81 , ASP O:82 , LYS O:295 , SER O:297 , LYS O:299 , GAL O:402 , HOH O:574BINDING SITE FOR RESIDUE SIA O 401
26CC8SOFTWARESIA O:401BINDING SITE FOR RESIDUE GAL O 402
27CC9SOFTWAREHIS O:164 , SER O:246 , HOH O:575 , HOH O:577BINDING SITE FOR RESIDUE CL O 403
28DC1SOFTWAREASN P:162 , GLN P:248 , PRO P:254 , THR P:255 , VAL P:256 , CL P:402 , HOH P:560BINDING SITE FOR RESIDUE GOL P 401
29DC2SOFTWAREHIS P:164 , SER P:246 , GOL P:401 , HOH P:578BINDING SITE FOR RESIDUE CL P 402
30DC3SOFTWARETRP Q:76 , ASP Q:82 , LYS Q:295 , SER Q:297 , LYS Q:299 , GAL Q:402 , HOH Q:534BINDING SITE FOR RESIDUE SIA Q 401
31DC4SOFTWARESIA Q:401BINDING SITE FOR RESIDUE GAL Q 402
32DC5SOFTWAREHIS Q:164 , GLN Q:248 , PRO Q:254 , THR Q:255 , VAL Q:256 , CL Q:404BINDING SITE FOR RESIDUE GOL Q 403
33DC6SOFTWAREHIS Q:164 , SER Q:246 , GOL Q:403BINDING SITE FOR RESIDUE CL Q 404
34DC7SOFTWAREHIS R:164 , SER R:246 , ILE R:247 , HOH R:764 , HOH R:765BINDING SITE FOR RESIDUE CL R 601
35DC8SOFTWARETRP S:76 , TYR S:81 , ASP S:82 , LYS S:295 , SER S:297 , LYS S:299 , GAL S:402 , HOH S:520BINDING SITE FOR RESIDUE SIA S 401
36DC9SOFTWARESIA S:401BINDING SITE FOR RESIDUE GAL S 402
37EC1SOFTWAREHIS S:164 , SER S:246 , HOH S:558 , HOH S:560BINDING SITE FOR RESIDUE CL S 403
38EC2SOFTWARETRP T:76 , TYR T:81 , ASP T:82 , LYS T:295 , SER T:297 , LYS T:299 , GAL T:402 , HOH T:537 , HOH T:548BINDING SITE FOR RESIDUE SIA T 401
39EC3SOFTWARESIA T:401BINDING SITE FOR RESIDUE GAL T 402
40EC4SOFTWAREASN T:162 , HIS T:164 , GLN T:248 , PRO T:254 , THR T:255 , VAL T:256 , CL T:404BINDING SITE FOR RESIDUE GOL T 403
41EC5SOFTWAREHIS T:164 , SER T:246 , ILE T:247 , GOL T:403 , HOH T:549BINDING SITE FOR RESIDUE CL T 404

(-) SS Bonds  (2, 2)

Asymmetric Unit
No.Residues
1B:117 -N:117
2H:117 -R:117

(-) Cis Peptide Bonds  (20, 20)

Asymmetric Unit
No.Residues
1Ser A:89 -Pro A:90
2Ser B:89 -Pro B:90
3Ser C:89 -Pro C:90
4Ser D:89 -Pro D:90
5Ser E:89 -Pro E:90
6Ser F:89 -Pro F:90
7Ser G:89 -Pro G:90
8Ser H:89 -Pro H:90
9Ser I:89 -Pro I:90
10Ser J:89 -Pro J:90
11Ser K:89 -Pro K:90
12Ser L:89 -Pro L:90
13Ser M:89 -Pro M:90
14Ser N:89 -Pro N:90
15Ser O:89 -Pro O:90
16Ser P:89 -Pro P:90
17Ser Q:89 -Pro Q:90
18Ser R:89 -Pro R:90
19Ser S:89 -Pro S:90
20Ser T:89 -Pro T:90

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4FMJ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4FMJ)

(-) Exons   (0, 0)

(no "Exon" information available for 4FMJ)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:269
                                                                                                                                                                                                                                                                                                             
               SCOP domains d4fmja_ A: automated matches                                                                                                                                                                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee......eeeeeeee............hhhhh................hhhhh...eeeeee......eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee...eeeee...............hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee..............eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmj A  41 EVLSVVTGEDSITQIELYLNPRMGVNSPDLPTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    50        60        70||      81        91       101       111||     127       137       147       157       167       177       187 ||    200       210       220       230       240       250       260       270       280       290       300       310         
                                                         71|                                    112|                                                                   189|                                                                                                                              
                                                          73                                     119                                                                    193                                                                                                                              


Chain B from PDB  Type:PROTEIN  Length:280
                                                                                                                                                                                                                                                                                                                        
               SCOP domains d4fmjb_ B: automated matches                                                                                                                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......eeeeeeee............hhhhhh................hhhhh...eeeeee............eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee....eeee..........hhhhh...hhhhhhh...hhhhhh.....eee...........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmj B  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNEDITCDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTTNGGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319


Chain C from PDB  Type:PROTEIN  Length:276
                                                                                                                                                                                                                                                                                                                    
               SCOP domains d4fmjc_ C: automated matches                                                                                                                                                                                                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeee......eeeeeeee...........hhhhh................hhhhh...eeeeee...........eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee...eeeee..........hhhhh...hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee.........ee...eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4fmj C  41 EVLSVVTGEDSITQIELYLNPRMGVNSPDLTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNEDTCDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTTNGGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    50        60        70|       82        92       102       112 ||    123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313      
                                                        70|                                      114|                                                                                                                                                                                                           
                                                         73                                       116                                                                                                                                                                                                           


Chain D from PDB  Type:PROTEIN  Length:271
                                                                                                                                                                                                                                                                                                               
               SCOP domains d4fmjd_ D: automated matches                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......eeeeeeee............hhhhh................hhhhh...eeeeee.......eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee...eeeee...............hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmj D  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    49        59        69||      80        90       100       110 ||    125       135       145       155       165       175       185   ||  198       208       218       228       238       248       258       268       278       288       298       308       318 
                                                         70|                                     112|                                                                    189|                                                                                                                              
                                                          72                                      118                                                                     193                                                                                                                              


Chain E from PDB  Type:PROTEIN  Length:272
                                                                                                                                                                                                                                                                                                                
               SCOP domains d4fmje_ E: automated matches                                                                                                                                                                                                                                                     SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......eeeeeeee............hhhhhh................hhhhh...eeeeee.......eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee....eeee...............hhhhhhh...hhhhhh.....eee...........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmj E  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    49        59        69        79        89        99       109  ||   124       134       144       154       164       174       184    || 197       207       217       227       237       247       257       267       277       287       297       307       317  
                                                                                                  112|                                                                    189|                                                                                                                              
                                                                                                   118                                                                     193                                                                                                                              


Chain F from PDB  Type:PROTEIN  Length:272
                                                                                                                                                                                                                                                                                                                
               SCOP domains d4fmjf_ F: automated matches                                                                                                                                                                                                                                                     SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......eeeeeeee............hhhhhh................hhhhh...eeeeee.......eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee...eeeee...............hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmj F  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    49        59        69        79        89        99       109  ||   124       134       144       154       164       174       184    || 197       207       217       227       237       247       257       267       277       287       297       307       317  
                                                                                                  112|                                                                    189|                                                                                                                              
                                                                                                   118                                                                     193                                                                                                                              


Chain G from PDB  Type:PROTEIN  Length:271
                                                                                                                                                                                                                                                                                                               
               SCOP domains d4fmjg_ G: automated matches                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee......eeeeeeee............hhhhhh................hhhhh...eeeeee......eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee....eeee................hhhhhhh...hhhhhh.....eee...........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmj G  41 EVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    50        60        70        80        90       100       110 ||    126       136       146       156       166       176       186   ||  198       208       218       228       238       248       258       268       278       288       298       308       318 
                                                                                                 112|                                                                    190|                                                                                                                              
                                                                                                  119                                                                     193                                                                                                                              


Chain H from PDB  Type:PROTEIN  Length:280
                                                                                                                                                                                                                                                                                                                        
               SCOP domains d4fmjh_ H: automated matches                                                                                                                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee......eeeeeeee............hhhhhh................hhhhh...eeeeee............eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee....eeee..........hhhhh...hhhhhhh...hhhhhh.....eee...........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmj H  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNEDITCDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTTNGGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319


Chain I from PDB  Type:PROTEIN  Length:268
                                                                                                                                                                                                                                                                                                            
               SCOP domains d4fmji_ I: automated matches                                                                                                                                                                                                                                                 SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee......eeeeeeee...........hhhhh................hhhhh...eeeeee......eeeeeeeeeeeee.hhhhhhh..................eeeeeeeeeee...eeeee..............hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee.........ee...eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmj I  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    49        59        69||      81        91       101       111||     127       137       147       157       167       177       187||     201       211       221       231       241       251       261       271       281       291       301       311        
                                                         70|                                    112|                                                                  188|                                                                                                                              
                                                          73                                     119                                                                   193                                                                                                                              


Chain J from PDB  Type:PROTEIN  Length:270
                                                                                                                                                                                                                                                                                                              
               SCOP domains d4fmjj_ J: automated matches                                                                                                                                                                                                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeee......eeeeeeee...........hhhhhh................hhhhh...eeeeee.......eeeeeeeeeeeee.hhhhhhh..................eeeeeeeeeee...eeeee...............hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4fmj J  41 EVLSVVTGEDSITQIELYLNPRMGVNSPDLTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    50        60        70|       81        91       101       111||     126       136       146       156       166       176       186  ||   199       209       219       229       239       249       259       269       279       289       299       309       319
                                                        70|                                     112|                                                                    189|                                                                                                                              
                                                         72                                      118                                                                     193                                                                                                                              


Chain K from PDB  Type:PROTEIN  Length:273
                                                                                                                                                                                                                                                                                                                 
               SCOP domains d4fmjk_ K: automated matches                                                                                                                                                                                                                                                      SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee......eeeeeeee.............hhhhh................hhhhh...eeeeee........eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee...eeeee...............hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee.........ee...eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmj K  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNEDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    49        59        69        79        89        99       109   ||  123       133       143       153       163       173       183     ||196       206       216       226       236       246       256       266       276       286       296       306       316   
                                                                                                   113|                                                                    189|                                                                                                                              
                                                                                                    118                                                                     193                                                                                                                              


Chain L from PDB  Type:PROTEIN  Length:272
                                                                                                                                                                                                                                                                                                                
               SCOP domains d4fmjl_ L: automated matches                                                                                                                                                                                                                                                     SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......eeeeeeee.............hhhhh................hhhhh...eeeeee.......eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee...eeeee...............hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee..............eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmj L  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    49        59        69        79        89        99       109  ||   124       134       144       154       164       174       184    || 197       207       217       227       237       247       257       267       277       287       297       307       317  
                                                                                                  112|                                                                    189|                                                                                                                              
                                                                                                   118                                                                     193                                                                                                                              


Chain M from PDB  Type:PROTEIN  Length:271
                                                                                                                                                                                                                                                                                                               
               SCOP domains d4fmjm_ M: automated matches                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......eeeeeeee............hhhhhh................hhhhh...eeeeee......eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee...eeeee...............hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee..............eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmj M  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    49        59        69        79        89        99       109  ||   125       135       145       155       165       175       185   ||  198       208       218       228       238       248       258       268       278       288       298       308       318 
                                                                                                  112|                                                                   189|                                                                                                                              
                                                                                                   119                                                                    193                                                                                                                              


Chain N from PDB  Type:PROTEIN  Length:278
                                                                                                                                                                                                                                                                                                                      
               SCOP domains d4fmjn_ N: automated matches                                                                                                                                                                                                                                                           SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......eeeeeeee.............hhhhh................hhhhh...eeeeee...........eeeeeeeeeeeeee.hhhhhhh..................eeeeeeeeeee...eeeee...............hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmj N  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNEDITCDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVKN 320
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189|      202       212       222       232       242       252       262       272       282       292       302       312        
                                                                                                                                                                               189|                                                                                                                               
                                                                                                                                                                                193                                                                                                                               


Chain O from PDB  Type:PROTEIN  Length:271
                                                                                                                                                                                                                                                                                                               
               SCOP domains d4fmjo_ O: automated matches                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......eeeeeeee............hhhhh................hhhhh...eeeeee.......eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee....eeee...............hhhhhhh...hhhhhh.....eee...........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmj O  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    49        59        69||      80        90       100       110 ||    125       135       145       155       165       175       185   ||  198       208       218       228       238       248       258       268       278       288       298       308       318 
                                                         70|                                     112|                                                                    189|                                                                                                                              
                                                          72                                      118                                                                     193                                                                                                                              


Chain P from PDB  Type:PROTEIN  Length:271
                                                                                                                                                                                                                                                                                                               
               SCOP domains d4fmjp_ P: automated matches                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......eeeeeeee.............hhhhh................hhhhh...eeeeee.......eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee...eeeee..............hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee..............eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmj P  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    49        59        69        79        89        99       109  ||   124       134       144       154       164       174       184    || 198       208       218       228       238       248       258       268       278       288       298       308       318 
                                                                                                  112|                                                                    189|                                                                                                                             
                                                                                                   118                                                                     194                                                                                                                             


Chain Q from PDB  Type:PROTEIN  Length:271
                                                                                                                                                                                                                                                                                                               
               SCOP domains d4fmjq_ Q: automated matches                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......eeeeeeee............hhhhhh................hhhhh...eeeeee......eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee....eeee...............hhhhhhh...hhhhhh.....eee...........eee.......eeeeeeee.......eeeee....ee..............eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmj Q  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    49        59        69        79        89        99       109  ||   125       135       145       155       165       175       185   ||  198       208       218       228       238       248       258       268       278       288       298       308       318 
                                                                                                  112|                                                                   189|                                                                                                                              
                                                                                                   119                                                                    193                                                                                                                              


Chain R from PDB  Type:PROTEIN  Length:277
                                                                                                                                                                                                                                                                                                                     
               SCOP domains d4fmjr_ R: automated matches                                                                                                                                                                                                                                                          SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee......eeeeeeee.............hhhhh................hhhhh...eeeeee............eeeeeeeeeeeee.hhhhhhh..................eeeeeeeeeee....eeee................hhhhhhh...hhhhhh.....eee...........eee.......eeeeeeee.......eeeee....ee..............eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmj R  41 EVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNEDITCDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    50        60        70        80        90       100       110       120       130       140       150       160       170       180       190|      202       212       222       232       242       252       262       272       282       292       302       312       
                                                                                                                                                                               190|                                                                                                                              
                                                                                                                                                                                193                                                                                                                              


Chain S from PDB  Type:PROTEIN  Length:270
                                                                                                                                                                                                                                                                                                              
               SCOP domains d4fmjs_ S: automated matches                                                                                                                                                                                                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeee......eeeeeeee.............hhhhh................hhhhh...eeeeee......eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee...eeeee...............hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4fmj S  41 EVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    50        60        70        80        90       100       110 ||    126       136       146       156       166       176       186  ||   199       209       219       229       239       249       259       269       279       289       299       309       319
                                                                                                 112|                                                                   189|                                                                                                                              
                                                                                                  119                                                                    193                                                                                                                              


Chain T from PDB  Type:PROTEIN  Length:271
                                                                                                                                                                                                                                                                                                               
               SCOP domains d4fmjt_ T: automated matches                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......eeeeeeee.............hhhhh................hhhhh...eeeeee......eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee...eeeee...............hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmj T  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    49        59        69        79        89        99       109  ||   125       135       145       155       165       175       185   ||  198       208       218       228       238       248       258       268       278       288       298       308       318 
                                                                                                  112|                                                                   189|                                                                                                                              
                                                                                                   119                                                                    193
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

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Class: All beta proteins (24004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4FMJ)

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(no "Pfam Domain" information available for 4FMJ)

(-) Gene Ontology  (2, 2)

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  4fmj
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  C0JPK1_9POLY | C0JPK1
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  C0JPK1_9POLY | C0JPK1
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        C0JPK1_9POLY | C0JPK1: 4fmg 4fmh 4fmi

(-) Related Entries Specified in the PDB File

4fmg 4fmh 4fmi