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(-) Description

Title :  MERKEL CELL POLYOMAVIRUS VP1 IN COMPLEX WITH 3'-SIALYLLACTOSAMINE
 
Authors :  U. Neu, H. Hengel, T. Stehle
Date :  17 Jun 12  (Deposition) - 05 Sep 12  (Release) - 05 Sep 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T
Biol. Unit 1:  A,B,C,D,E  (1x)
Biol. Unit 2:  F,G,H,I,J  (1x)
Biol. Unit 3:  K,L,M,N,O  (1x)
Biol. Unit 4:  P,Q,R,S,T  (1x)
Biol. Unit 5:  A,B,C,D,E,K,L,M,N,O  (1x)
Biol. Unit 6:  F,G,H,I,J,P,Q,R,S,T  (1x)
Keywords :  Viral Capsid Protein, Jelly Roll, Encapsidation, Receptor Binding, Sialylated Oligosaccharides, Viral Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  U. Neu, H. Hengel, B. S. Blaum, R. M. Schowalter, D. Macejak, M. Gilbert W. W. Wakarchuk, A. Imamura, H. Ando, M. Kiso, N. Arnberg, R. L. Garcea, T. Peters, C. B. Buck, T. Stehle
Structures Of Merkel Cell Polyomavirus Vp1 Complexes Define A Sialic Acid Binding Site Required For Infection.
Plos Pathog. V. 8 02738 2012
PubMed-ID: 22910713  |  Reference-DOI: 10.1371/JOURNAL.PPAT.1002738

(-) Compounds

Molecule 1 - VP1
    Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 37-319
    Gene: VP1
    Organism Scientific: MERKEL CELL POLYOMAVIRUS
    Organism Taxid: 493803
    Strain: W162

 Structural Features

(-) Chains, Units

  1234567891011121314151617181920
Asymmetric Unit : ABCDEFGHIJKLMNOPQRST
Biological Unit 1 (1x): ABCDE               
Biological Unit 2 (1x):      FGHIJ          
Biological Unit 3 (1x):           KLMNO     
Biological Unit 4 (1x):                PQRST
Biological Unit 5 (1x): ABCDE     KLMNO     
Biological Unit 6 (1x):      FGHIJ     PQRST

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 53)

Asymmetric Unit (5, 53)
No.NameCountTypeFull Name
1CL21Ligand/IonCHLORIDE ION
2GAL2Ligand/IonBETA-D-GALACTOSE
3GOL25Ligand/IonGLYCEROL
4NAG1Ligand/IonN-ACETYL-D-GLUCOSAMINE
5SIA4Ligand/IonO-SIALIC ACID
Biological Unit 1 (4, 9)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2GAL1Ligand/IonBETA-D-GALACTOSE
3GOL5Ligand/IonGLYCEROL
4NAG1Ligand/IonN-ACETYL-D-GLUCOSAMINE
5SIA2Ligand/IonO-SIALIC ACID
Biological Unit 2 (1, 5)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2GAL-1Ligand/IonBETA-D-GALACTOSE
3GOL5Ligand/IonGLYCEROL
4NAG-1Ligand/IonN-ACETYL-D-GLUCOSAMINE
5SIA-1Ligand/IonO-SIALIC ACID
Biological Unit 3 (2, 10)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2GAL-1Ligand/IonBETA-D-GALACTOSE
3GOL9Ligand/IonGLYCEROL
4NAG-1Ligand/IonN-ACETYL-D-GLUCOSAMINE
5SIA1Ligand/IonO-SIALIC ACID
Biological Unit 4 (3, 8)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2GAL1Ligand/IonBETA-D-GALACTOSE
3GOL6Ligand/IonGLYCEROL
4NAG-1Ligand/IonN-ACETYL-D-GLUCOSAMINE
5SIA1Ligand/IonO-SIALIC ACID
Biological Unit 5 (4, 19)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2GAL1Ligand/IonBETA-D-GALACTOSE
3GOL14Ligand/IonGLYCEROL
4NAG1Ligand/IonN-ACETYL-D-GLUCOSAMINE
5SIA3Ligand/IonO-SIALIC ACID
Biological Unit 6 (3, 13)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
2GAL1Ligand/IonBETA-D-GALACTOSE
3GOL11Ligand/IonGLYCEROL
4NAG-1Ligand/IonN-ACETYL-D-GLUCOSAMINE
5SIA1Ligand/IonO-SIALIC ACID

(-) Sites  (53, 53)

Asymmetric Unit (53, 53)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETRP A:76 , ASP A:82 , LYS A:295 , SER A:297 , LYS A:299 , GAL A:403 , HOH A:659 , HOH A:660 , LYS Q:86 , HOH Q:673BINDING SITE FOR RESIDUE SIA A 401
02AC2SOFTWAREGAL A:403 , GLN Q:92 , PRO Q:93 , PRO Q:187 , LYS Q:188 , HOH Q:553 , HOH Q:623 , HOH Q:678BINDING SITE FOR RESIDUE NAG A 402
03AC3SOFTWARESER A:297 , SIA A:401 , NAG A:402 , HOH A:671 , HOH A:679 , GLN Q:92BINDING SITE FOR RESIDUE GAL A 403
04AC4SOFTWAREASN A:162 , GLN A:248 , PRO A:254 , THR A:255 , VAL A:256 , CL A:405 , HOH A:531 , HOH A:629BINDING SITE FOR RESIDUE GOL A 404
05AC5SOFTWAREHIS A:164 , SER A:246 , ILE A:247 , GOL A:404BINDING SITE FOR RESIDUE CL A 405
06AC6SOFTWAREASN B:162 , HIS B:164 , GLN B:248 , PRO B:254 , THR B:255 , VAL B:256 , CL B:402 , HOH B:654BINDING SITE FOR RESIDUE GOL B 401
07AC7SOFTWAREHIS B:164 , SER B:246 , ILE B:247 , GLN B:248 , GOL B:401 , HOH B:504BINDING SITE FOR RESIDUE CL B 402
08AC8SOFTWAREASN C:162 , HIS C:164 , GLN C:248 , PRO C:254 , THR C:255 , VAL C:256 , CL C:402 , HOH C:556BINDING SITE FOR RESIDUE GOL C 401
09AC9SOFTWAREHIS C:164 , SER C:246 , ILE C:247 , GLN C:248 , GOL C:401 , HOH C:547BINDING SITE FOR RESIDUE CL C 402
10BC1SOFTWAREASN D:162 , HIS D:164 , GLN D:248 , PRO D:254 , THR D:255 , VAL D:256 , CL D:402 , HOH D:591 , HOH D:601BINDING SITE FOR RESIDUE GOL D 401
11BC2SOFTWAREHIS D:164 , SER D:246 , ILE D:247 , GLN D:248 , GOL D:401 , HOH D:508BINDING SITE FOR RESIDUE CL D 402
12BC3SOFTWARETRP E:76 , TYR E:81 , ASP E:82 , LYS E:295 , SER E:297 , LYS E:299 , HOH E:620 , HOH E:660 , HOH E:661BINDING SITE FOR RESIDUE SIA E 401
13BC4SOFTWAREASN E:162 , GLN E:248 , PRO E:254 , VAL E:256 , CL E:403 , HOH E:591 , HOH E:666BINDING SITE FOR RESIDUE GOL E 402
14BC5SOFTWAREHIS E:164 , SER E:246 , ILE E:247 , GOL E:402 , HOH E:603BINDING SITE FOR RESIDUE CL E 403
15BC6SOFTWAREASN F:162 , HIS F:164 , SER F:246 , GLN F:248 , PRO F:254 , THR F:255 , VAL F:256 , CL F:402BINDING SITE FOR RESIDUE GOL F 401
16BC7SOFTWAREASN F:162 , HIS F:164 , SER F:246 , ILE F:247 , GOL F:401 , HOH F:517BINDING SITE FOR RESIDUE CL F 402
17BC8SOFTWAREASN G:162 , GLN G:248 , PRO G:254 , THR G:255 , VAL G:256 , CL G:402BINDING SITE FOR RESIDUE GOL G 401
18BC9SOFTWAREHIS G:164 , SER G:246 , ILE G:247 , GLN G:248 , GOL G:401 , HOH G:519BINDING SITE FOR RESIDUE CL G 402
19CC1SOFTWAREASN H:162 , GLN H:248 , PRO H:254 , THR H:255 , VAL H:256 , CL H:402BINDING SITE FOR RESIDUE GOL H 401
20CC2SOFTWAREHIS H:164 , SER H:246 , ILE H:247 , GLN H:248 , GOL H:401 , HOH H:503BINDING SITE FOR RESIDUE CL H 402
21CC3SOFTWAREASN I:162 , HIS I:164 , GLN I:248 , PRO I:254 , THR I:255 , VAL I:256 , CL I:402BINDING SITE FOR RESIDUE GOL I 401
22CC4SOFTWAREHIS I:164 , SER I:246 , ILE I:247 , GLN I:248 , GOL I:401 , HOH I:536BINDING SITE FOR RESIDUE CL I 402
23CC5SOFTWAREASN J:162 , HIS J:164 , GLN J:248 , PRO J:254 , THR J:255 , VAL J:256 , CL J:402BINDING SITE FOR RESIDUE GOL J 401
24CC6SOFTWAREHIS J:164 , SER J:246 , ILE J:247 , GOL J:401 , HOH J:533BINDING SITE FOR RESIDUE CL J 402
25CC7SOFTWAREASN K:162 , HIS K:164 , GLN K:248 , PRO K:254 , VAL K:256 , CL K:402 , HOH K:565 , HOH K:636BINDING SITE FOR RESIDUE GOL K 401
26CC8SOFTWAREASN K:162 , HIS K:164 , SER K:246 , ILE K:247 , GLN K:248 , GOL K:401 , HOH K:506BINDING SITE FOR RESIDUE CL K 402
27CC9SOFTWARELYS K:217 , SER K:236 , THR M:116 , GLU O:56 , TYR O:58BINDING SITE FOR RESIDUE GOL K 403
28DC1SOFTWAREASN L:75 , TRP L:76 , TYR L:143 , TRP L:144 , ASP M:181 , GLN M:183 , HOH M:575BINDING SITE FOR RESIDUE GOL L 501
29DC2SOFTWAREASN L:162 , HIS L:164 , GLN L:248 , PRO L:254 , THR L:255 , VAL L:256 , CL L:504BINDING SITE FOR RESIDUE GOL L 502
30DC3SOFTWARESER G:88 , TYR L:81 , ASP L:82 , LYS L:295 , HOH L:782BINDING SITE FOR RESIDUE GOL L 503
31DC4SOFTWAREHIS L:164 , SER L:246 , ILE L:247 , GLN L:248 , GOL L:502 , HOH L:612BINDING SITE FOR RESIDUE CL L 504
32DC5SOFTWARETRP M:76 , TYR M:81 , ASP M:82 , LYS M:295 , SER M:297 , LYS M:299 , HOH M:551 , HOH M:558 , HOH M:612 , HOH M:630BINDING SITE FOR RESIDUE SIA M 401
33DC6SOFTWAREASN M:75 , TRP M:76 , TYR M:143 , TRP M:144 , HOH M:720 , ASP N:181 , TYR N:182 , GLN N:183 , GLN N:210 , HOH N:532BINDING SITE FOR RESIDUE GOL M 402
34DC7SOFTWAREASN M:162 , HIS M:164 , GLN M:248 , PRO M:254 , THR M:255 , VAL M:256 , CL M:404BINDING SITE FOR RESIDUE GOL M 403
35DC8SOFTWAREHIS M:164 , SER M:246 , ILE M:247 , GLN M:248 , GOL M:403 , HOH M:503BINDING SITE FOR RESIDUE CL M 404
36DC9SOFTWAREASN N:162 , HIS N:164 , GLN N:248 , PRO N:254 , VAL N:256 , CL N:402 , HOH N:534BINDING SITE FOR RESIDUE GOL N 401
37EC1SOFTWAREHIS N:164 , SER N:246 , ILE N:247 , GOL N:401 , HOH N:525BINDING SITE FOR RESIDUE CL N 402
38EC2SOFTWAREASN O:162 , GLN O:248 , PRO O:254 , THR O:255 , VAL O:256 , CL O:402 , HOH O:511BINDING SITE FOR RESIDUE GOL O 401
39EC3SOFTWARESER O:246 , ILE O:247 , GLN O:248 , GOL O:401 , HOH O:504BINDING SITE FOR RESIDUE CL O 402
40EC4SOFTWAREASN P:162 , HIS P:164 , GLN P:248 , PRO P:254 , THR P:255 , VAL P:256 , CL P:402 , HOH P:564BINDING SITE FOR RESIDUE GOL P 401
41EC5SOFTWAREASN P:162 , HIS P:164 , SER P:246 , ILE P:247 , GOL P:401 , HOH P:534BINDING SITE FOR RESIDUE CL P 402
42EC6SOFTWAREASN Q:162 , HIS Q:164 , GLN Q:248 , PRO Q:254 , THR Q:255 , VAL Q:256 , LEU Q:257 , CL Q:402 , HOH Q:590BINDING SITE FOR RESIDUE GOL Q 401
43EC7SOFTWAREHIS Q:164 , SER Q:246 , ILE Q:247 , GLN Q:248 , GOL Q:401 , HOH Q:515BINDING SITE FOR RESIDUE CL Q 402
44EC8SOFTWAREASN R:75 , TRP R:76 , TYR R:143 , TRP R:144 , HOH R:802 , ASP S:181 , GLN S:183 , HOH S:568BINDING SITE FOR RESIDUE GOL R 501
45EC9SOFTWAREASN R:162 , HIS R:164 , GLN R:248 , PRO R:254 , THR R:255 , VAL R:256 , CL R:503 , HOH R:801BINDING SITE FOR RESIDUE GOL R 502
46FC1SOFTWAREHIS R:164 , SER R:246 , ILE R:247 , GLN R:248 , GOL R:502 , HOH R:629BINDING SITE FOR RESIDUE CL R 503
47FC2SOFTWARETYR D:81 , ASP D:82 , LYS S:86 , GLY S:87 , SER S:88BINDING SITE FOR RESIDUE GOL S 401
48FC3SOFTWAREHIS S:164 , SER S:246 , ILE S:247 , GLN S:248 , HOH S:517BINDING SITE FOR RESIDUE CL S 402
49FC4SOFTWAREARG C:148 , TRP R:144 , HOH R:802 , SER S:89BINDING SITE FOR RESIDUE CL S 403
50FC5SOFTWARETRP T:76 , TYR T:81 , ASP T:82 , LYS T:295 , SER T:297 , LYS T:299 , GAL T:402 , HOH T:603 , HOH T:612 , HOH T:674BINDING SITE FOR RESIDUE SIA T 401
51FC6SOFTWARESIA T:401 , HOH T:635BINDING SITE FOR RESIDUE GAL T 402
52FC7SOFTWAREASN T:162 , HIS T:164 , GLN T:248 , PRO T:254 , THR T:255 , VAL T:256 , CL T:404 , HOH T:623BINDING SITE FOR RESIDUE GOL T 403
53FC8SOFTWAREHIS T:164 , SER T:246 , ILE T:247 , GOL T:403 , HOH T:504BINDING SITE FOR RESIDUE CL T 404

(-) SS Bonds  (3, 3)

Asymmetric Unit
No.Residues
1B:117 -N:117
2C:117 -M:117
3H:117 -R:117

(-) Cis Peptide Bonds  (21, 21)

Asymmetric Unit
No.Residues
1Ser A:89 -Pro A:90
2Ser B:89 -Pro B:90
3Ser C:89 -Pro C:90
4Gly C:193 -Pro C:194
5Ser D:89 -Pro D:90
6Ser E:89 -Pro E:90
7Ser F:89 -Pro F:90
8Ser G:89 -Pro G:90
9Ser H:89 -Pro H:90
10Ser I:89 -Pro I:90
11Ser J:89 -Pro J:90
12Ser K:89 -Pro K:90
13Ser L:89 -Pro L:90
14Ser M:89 -Pro M:90
15Ser N:89 -Pro N:90
16Ser O:89 -Pro O:90
17Ser P:89 -Pro P:90
18Ser Q:89 -Pro Q:90
19Ser R:89 -Pro R:90
20Ser S:89 -Pro S:90
21Ser T:89 -Pro T:90

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4FMI)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4FMI)

(-) Exons   (0, 0)

(no "Exon" information available for 4FMI)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:270
                                                                                                                                                                                                                                                                                                              
               SCOP domains d4fmia_ A: automated matches                                                                                                                                                                                                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeee......eeeeeeee.............hhhhh................hhhhh...eeeeee......eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee....eeee...............hhhhhhh...hhhhhh.....eee...........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4fmi A  41 EVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    50        60        70        80        90       100       110 ||    126       136       146       156       166       176       186  ||   199       209       219       229       239       249       259       269       279       289       299       309       319
                                                                                                 112|                                                                   189|                                                                                                                              
                                                                                                  119                                                                    193                                                                                                                              


Chain B from PDB  Type:PROTEIN  Length:279
                                                                                                                                                                                                                                                                                                                       
               SCOP domains d4fmib_ B: automated matches                                                                                                                                                                                                                                                            SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee......eeeeeeee.............hhhhh................hhhhh...eeeeee............eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee...eeeee..........hhhhh...hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmi B  41 EVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNEDITCDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTTNGGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310         


Chain C from PDB  Type:PROTEIN  Length:279
                                                                                                                                                                                                                                                                                                                       
               SCOP domains d4fmic_ C: automated matches                                                                                                                                                                                                                                                            SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......eeeeeeee............hhhhh................hhhhh...eeeeee............eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee...eeeee..................hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmi C  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLPTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNEDITCDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTTNGGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    49        59        69 ||     80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310         
                                                          71|                                                                                                                                                                                                                                                      
                                                           73                                                                                                                                                                                                                                                      


Chain D from PDB  Type:PROTEIN  Length:270
                                                                                                                                                                                                                                                                                                              
               SCOP domains d4fmid_ D: automated matches                                                                                                                                                                                                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeee......eeeeeeee...........hhhhh................hhhhh...eeeeee......eeeeeeeeeeeee.hhhhhhh..................eeeeeeeeeee...eeeee................hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4fmi D  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    49        59        69||      81        91       101       111||     127       137       147       157       167       177       187  ||   199       209       219       229       239       249       259       269       279       289       299       309       319
                                                         70|                                    112|                                                                    190|                                                                                                                              
                                                          73                                     119                                                                     193                                                                                                                              


Chain E from PDB  Type:PROTEIN  Length:271
                                                                                                                                                                                                                                                                                                               
               SCOP domains d4fmie_ E: automated matches                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee......eeeeeeee.............hhhhh................hhhhh...eeeeee......eeeeeeeeeeeee.hhhhhhh..................eeeeeeeeeee...eeeee...............hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmi E  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    49        59        69        79        89        99       109  ||   125       135       145       155       165       175       185   ||  198       208       218       228       238       248       258       268       278       288       298       308       318 
                                                                                                  112|                                                                   189|                                                                                                                              
                                                                                                   119                                                                    193                                                                                                                              


Chain F from PDB  Type:PROTEIN  Length:272
                                                                                                                                                                                                                                                                                                                
               SCOP domains d4fmif_ F: automated matches                                                                                                                                                                                                                                                     SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......eeeeeeee.............hhhhh................hhhhh...eeeeee......eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee...eeeee................hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmi F  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    49        59        69        79        89        99       109  ||   125       135       145       155       165       175       185    || 197       207       217       227       237       247       257       267       277       287       297       307       317  
                                                                                                  112|                                                                    190|                                                                                                                              
                                                                                                   119                                                                     193                                                                                                                              


Chain G from PDB  Type:PROTEIN  Length:274
                                                                                                                                                                                                                                                                                                                  
               SCOP domains d4fmig_ G: automated matches                                                                                                                                                                                                                                                       SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee......eeeeeeee.............hhhhh................hhhhh...eeeeee.........eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee...eeeee................hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmi G  41 EVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNEDDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    50        60        70        80        90       100       110   ||  123       133       143       153       163       173       183      |195       205       215       225       235       245       255       265       275       285       295       305       315    
                                                                                                   114|                                                                     190|                                                                                                                              
                                                                                                    118                                                                      193                                                                                                                              


Chain H from PDB  Type:PROTEIN  Length:280
                                                                                                                                                                                                                                                                                                                        
               SCOP domains d4fmih_ H: automated matches                                                                                                                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......eeeeeeee............hhhhhh................hhhhh...eeeeee............eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee...eeeee..........hhhhh...hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmi H  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNEDITCDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTTNGGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319


Chain I from PDB  Type:PROTEIN  Length:270
                                                                                                                                                                                                                                                                                                              
               SCOP domains d4fmii_ I: automated matches                                                                                                                                                                                                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeee......eeeeeeee.............hhhhh................hhhhh...eeeeee......eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee....eeee..............hhhhhhh...hhhhhh.....eee...........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4fmi I  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    49        59        69        79        89        99       109  ||   125       135       145       155       165       175       185  ||   199       209       219       229       239       249       259       269       279       289       299       309       319
                                                                                                  112|                                                                  188|                                                                                                                              
                                                                                                   119                                                                   193                                                                                                                              


Chain J from PDB  Type:PROTEIN  Length:271
                                                                                                                                                                                                                                                                                                               
               SCOP domains d4fmij_ J: automated matches                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee......eeeeeeee.............hhhhh................hhhhh...eeeeee.......eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee...eeeee...............hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmi J  41 EVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    50        60        70        80        90       100       110 ||    125       135       145       155       165       175       185   ||  198       208       218       228       238       248       258       268       278       288       298       308       318 
                                                                                                 112|                                                                    189|                                                                                                                              
                                                                                                  118                                                                     193                                                                                                                              


Chain K from PDB  Type:PROTEIN  Length:274
                                                                                                                                                                                                                                                                                                                  
               SCOP domains d4fmik_ K: automated matches                                                                                                                                                                                                                                                       SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee......eeeeeeee............hhhhhh................hhhhh...eeeeee.........eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee...eeeee...............hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmi K  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNECDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    49        59        69        79        89        99       109   ||  122       132       142       152       162       172       182      |195       205       215       225       235       245       255       265       275       285       295       305       315    
                                                                                                   113|                                                                     189|                                                                                                                              
                                                                                                    117                                                                      193                                                                                                                              


Chain L from PDB  Type:PROTEIN  Length:271
                                                                                                                                                                                                                                                                                                               
               SCOP domains d4fmil_ L: automated matches                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee..hhh.eeeeeeee............hhhhh................hhhhh...eeeeee......eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee...eeeee...............hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee..............eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmi L  39 GVEVLSVVTGEDSITQIELYLNPRMGVNSPDLTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    48        58        68 ||     79        89        99       109  ||   125       135       145       155       165       175       185   ||  198       208       218       228       238       248       258       268       278       288       298       308       318 
                                                          70|                                     112|                                                                   189|                                                                                                                              
                                                           72                                      119                                                                    193                                                                                                                              


Chain M from PDB  Type:PROTEIN  Length:278
                                                                                                                                                                                                                                                                                                                      
               SCOP domains d4fmim_ M: automated matches                                                                                                                                                                                                                                                           SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......eeeeeeee.............hhhhh................hhhhh...eeeeee...........eeeeeeeeeeeeee.hhhhhhh.....................eeeeeeee....eeee...............hhhhhhh...hhhhhh.....eee...........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmi M  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNEDITCDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVKN 320
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189|      202       212       222       232       242       252       262       272       282       292       302       312        
                                                                                                                                                                               189|                                                                                                                               
                                                                                                                                                                                193                                                                                                                               


Chain N from PDB  Type:PROTEIN  Length:278
                                                                                                                                                                                                                                                                                                                      
               SCOP domains d4fmin_ N: automated matches                                                                                                                                                                                                                                                           SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......eeeeeeee............hhhhhh................hhhhh...eeeeee...........eeeeeeeeeeeeee.hhhhhhh.....................eeeeeeee...eeeee...............hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee.........ee...eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmi N  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNEDITCDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVKN 320
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189|      202       212       222       232       242       252       262       272       282       292       302       312        
                                                                                                                                                                               189|                                                                                                                               
                                                                                                                                                                                193                                                                                                                               


Chain O from PDB  Type:PROTEIN  Length:271
                                                                                                                                                                                                                                                                                                               
               SCOP domains d4fmio_ O: automated matches                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee......eeeeeeee.............hhhhh................hhhhh...eeeeee.......eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee...eeeee...............hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmi O  41 EVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    50        60        70        80        90       100       110 ||    125       135       145       155       165       175       185   ||  198       208       218       228       238       248       258       268       278       288       298       308       318 
                                                                                                 112|                                                                    189|                                                                                                                              
                                                                                                  118                                                                     193                                                                                                                              


Chain P from PDB  Type:PROTEIN  Length:273
                                                                                                                                                                                                                                                                                                                 
               SCOP domains d4fmip_ P: automated matches                                                                                                                                                                                                                                                      SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee......eeeeeeee.............hhhhh................hhhhh...eeeeee........eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee...eeeee................hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmi P  41 EVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNEDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    50        60        70        80        90       100       110   ||  124       134       144       154       164       174       184     ||196       206       216       226       236       246       256       266       276       286       296       306       316   
                                                                                                   114|                                                                    190|                                                                                                                              
                                                                                                    119                                                                     193                                                                                                                              


Chain Q from PDB  Type:PROTEIN  Length:271
                                                                                                                                                                                                                                                                                                               
               SCOP domains d4fmiq_ Q: automated matches                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee......eeeeeeee.............hhhhh................hhhhh...eeeeee......eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee...eeeee................hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmi Q  41 EVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    50        60        70        80        90       100       110 ||    126       136       146       156       166       176       186   ||  198       208       218       228       238       248       258       268       278       288       298       308       318 
                                                                                                 112|                                                                    190|                                                                                                                              
                                                                                                  119                                                                     193                                                                                                                              


Chain R from PDB  Type:PROTEIN  Length:278
                                                                                                                                                                                                                                                                                                                      
               SCOP domains d4fmir_ R: automated matches                                                                                                                                                                                                                                                           SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......eeeeeeee.............hhhhh................hhhhh...eeeeee...........eeeeeeeeeeeeee.hhhhhhh..................eeeeeeeeeee....eeee...............hhhhhhh...hhhhhh.....eee...........eee.......eeeeeeee.......eeeee....ee..............eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmi R  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNEDITCDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVKN 320
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189|      202       212       222       232       242       252       262       272       282       292       302       312        
                                                                                                                                                                               189|                                                                                                                               
                                                                                                                                                                                193                                                                                                                               


Chain S from PDB  Type:PROTEIN  Length:271
                                                                                                                                                                                                                                                                                                               
               SCOP domains d4fmis_ S: automated matches                                                                                                                                                                                                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......eeeeeeee.............hhhhh................hhhhh...eeeeee......eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee...eeeee...............hhhhhhh...hhhhhh.....eeee..........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmi S  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTGPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    49        59        69        79        89        99       109  ||   125       135       145       155       165       175       185   ||  198       208       218       228       238       248       258       268       278       288       298       308       318 
                                                                                                  112|                                                                   189|                                                                                                                              
                                                                                                   119                                                                    193                                                                                                                              


Chain T from PDB  Type:PROTEIN  Length:273
                                                                                                                                                                                                                                                                                                                 
               SCOP domains d4fmit_ T: automated matches                                                                                                                                                                                                                                                      SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee......eeeeeeee............hhhhhh................hhhhh...eeeeee........eeeeeeeeeeeee.hhhhhhh.....................eeeeeeee....eeee...............hhhhhhh...hhhhhh.....eee...........eee.......eeeeeeee.......eeeee....ee..........hhh.eeeeeeeeeeeeee.....eeeee..eeeeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fmi T  40 VEVLSVVTGEDSITQIELYLNPRMGVNSPDLPTTSNWYTYTYDLQPKGSSPDQPIKENLPAYSVARVSLPMLNCDTLQMWEAISVKTEVVGISSLINVHYWDMKRVHDYGAGIPVSGVNYHMFAIGGEPLDLQGLVLDYQTQYPKTTPITIETVLGRKMTPKNQGLDPQAKAKLDKDGNYPIEVWCPDPSKNENSRYYGSIQTGSQTPTVLQFSNTLTTVLLDENGVGPLCKGDGLFISCADIVGFLFKTSGKMALHGLPRYFNVTLRKRWVK 319
                                    49        59        69        79        89        99       109  ||   123       133       143       153       163       173       183      |196       206       216       226       236       246       256       266       276       286       296       306       316   
                                                                                                  112|                                                                      190|                                                                                                                             
                                                                                                   117                                                                       194
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 20)

Asymmetric Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4FMI)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4FMI)

(-) Gene Ontology  (2, 2)

Asymmetric Unit(hide GO term definitions)

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  4fmi
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  C0JPK1_9POLY | C0JPK1
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        C0JPK1_9POLY | C0JPK1: 4fmg 4fmh 4fmj

(-) Related Entries Specified in the PDB File

4fmg 4fmh 4fmj