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(-) Description

Title :  CARBONMONOXY STRUCTURE OF HIS100PHE CEREBRATULUS LACTEUS MINI-HEMOGLOBIN
 
Authors :  J. Soman, M. D. Salter, J. S. Olson
Date :  14 May 12  (Deposition) - 30 May 12  (Release) - 30 May 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.56
Chains :  Asym./Biol. Unit :  A
Keywords :  Oxygen-Storage, Apolar Tunnel, Oxygen Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Soman, M. D. Salter, J. S. Olson
Carbonmonoxy Structure Of His100Phe Cerebratulus Lacteus Mini-Hemoglobin
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - NEURAL HEMOGLOBIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Mutation: YES
    Organism Common: MILKY RIBBON WORM
    Organism Scientific: CEREBRATULUS LACTEUS
    Organism Taxid: 6221
    Synonym: NRHB

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1CMO1Ligand/IonCARBON MONOXIDE
2HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREMET A:0 , LYS A:24 , PHE A:25 , GLN A:44 , LYS A:47 , TYR A:51 , LEU A:65 , ARG A:68 , HIS A:69 , ARG A:72 , VAL A:74 , GLU A:78 , PHE A:79 , ILE A:102 , CMO A:202 , HOH A:305 , HOH A:319 , HOH A:327 , HOH A:362 , HOH A:457BINDING SITE FOR RESIDUE HEM A 201
2AC2SOFTWARETYR A:11 , PHE A:25 , GLN A:44 , HEM A:201BINDING SITE FOR RESIDUE CMO A 202

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4F6F)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4F6F)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4F6F)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4F6F)

(-) Exons   (0, 0)

(no "Exon" information available for 4F6F)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:PROTEIN  Length:110
                                                                                                                                              
               SCOP domains d4f6fa_ A: Nerve tissue mini-hemoglobin (neural globin)                                                        SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhh...hhhhhhhhhhhhhhhhhh.....hhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------- Transcript
                 4f6f A   0 MVNWAAVVDDFYQELFKAHPEYQNKFGFKGVALGSLKGNAAYKTQAGKTVDYINAAIGGSADAAGLASRHKGRNVGSAEFHNAKACLAKACSAHGAPDLGFAIDDILSHL 109
                                     9        19        29        39        49        59        69        79        89        99       109
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4F6F)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4F6F)

(-) Gene Ontology  (6, 6)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        GLBN_CERLA | O76242: 1kr7 1v07 2vyy 2vyz 2xkg 2xkh 2xki 4avd 4ave 4f68 4f69 4f6b 4f6d 4f6g 4f6i 4f6j

(-) Related Entries Specified in the PDB File

4f68 4f69 4f6b 4f6d 4f6g 4f6i 4f6j