Chain A from PDB Type:PROTEIN Length:638
aligned with CLPB_ECOLI | P63284 from UniProtKB/Swiss-Prot Length:857
Alignment length:699
168 178 188 198 208 218 228 238 248 258 268 278 288 298 308 318 328 338 348 358 368 378 388 398 408 418 428 438 448 458 468 478 488 498 508 518 528 538 548 558 568 578 588 598 608 618 628 638 648 658 668 678 688 698 708 718 728 738 748 758 768 778 788 798 808 818 828 838 848
CLPB_ECOLI 159 QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857
SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhheeehhhhhh..........hhhhhhhhhhhh................hhhhhhhhhhhhhh............eee.....------------...hhhhhhhh...........hhh....-------..hhhhhhhhh...........hhhhhhhhh..hhhh............hhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhh...--------.hhhhhhhhhhhhhhhhhhhhhhhhhh-----------------hhhhh...------........hhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhh...........hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.....................hhhhhhhhhhhhh..........hhh.....hhhhhh..---------..hhhhhhhh...eeeee..hhh..hhhhhhhhhhhhh.eee.....eee...eeeee...hhhhhhhh..--..hhhhhhhhhhhhhhh..hhhhhh...........hhhhhhhhhhhhhhhhhhhh.....eee.hhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhh........eeeee....eeee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------CLPAB_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CLPAB_2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4d2x A 159 QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDmGAL------------RLKGVLNDLAKQEGNVILFIDELHTmVGA-------DAGNmLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRmQIDSKPEELDRLDRRIIQLKLEQQALmK--------RLDmLNEELSDKERQYSELEEEWKAEK-----------------IAIEQARR------mSELQYGKIPELEKQLEAATQLEGKTmRLLRNKVTDAEIAEVLARWTGIPVSRmmESEREKLLRmEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFmFDSDEAmVRIDmSEFmEKHSVSRLVGA---------GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVImTSNLGSDLIQERF--LDYAHmKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857
168 178 188 198 208 218 228 238 | | - 258 268 278 | | - | 298 308 318 328 338 348 358 368 378 388 398 | 408 418 428 || - | | 448 458 | - - | 488 | 498 508 518 | 528 538 548 || 558 | 568 578 588 598 608 618 | 628| | 638 648| -| 668 678 688 698 708 718 728| | 738 748 758 768 778 788 798 808 818 828 838 848
242-MSE 258 283-MSE 294 | 403-MSE 430-MSE 440 | 466 484 491 | 524-MSE 551-MSE 562-MSE 622-MSE | | | 649 659 716-MSE 729 | |
245 286 298-MSE 431 443-MSE 498-MSE 552-MSE 629-MSE| | 732 |
634-MSE 737-MSE
638-MSE
Chain B from PDB Type:PROTEIN Length:655
aligned with CLPB_ECOLI | P63284 from UniProtKB/Swiss-Prot Length:857
Alignment length:699
168 178 188 198 208 218 228 238 248 258 268 278 288 298 308 318 328 338 348 358 368 378 388 398 408 418 428 438 448 458 468 478 488 498 508 518 528 538 548 558 568 578 588 598 608 618 628 638 648 658 668 678 688 698 708 718 728 738 748 758 768 778 788 798 808 818 828 838 848
CLPB_ECOLI 159 QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857
SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhheeehhhhhh..........hhhhhhhhhhhh................hhhhhhhhhhhhhh............eee.....------------...hhhhhhhh...........hhh....-------..hhhhhhhhh...........hhhhhhhhh..hhhh............hhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhh...--------.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...------........hhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhh...........hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.....................hhhhhhhhhhhhh..........hhh.....hhhhhh..---------..hhhhhhhh...eeeee..hhh..hhhhhhhhhhhhh.eee.....eee...eeeee...hhhhhhhh..--..hhhhhhhhhhhhhhh..hhhhhh...........hhhhhhhhhhhhhhhhhhhh.....eee.hhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhh........eeeee....eeee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------CLPAB_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CLPAB_2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4d2x B 159 QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDmGAL------------RLKGVLNDLAKQEGNVILFIDELHTmVGA-------DAGNmLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRmQIDSKPEELDRLDRRIIQLKLEQQALmK--------RLDmLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARR------mSELQYGKIPELEKQLEAATQLEGKTmRLLRNKVTDAEIAEVLARWTGIPVSRmmESEREKLLRmEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFmFDSDEAmVRIDmSEFmEKHSVSRLVGA---------GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVImTSNLGSDLIQERF--LDYAHmKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857
168 178 188 198 208 218 228 238 | | - 258 268 278 | | - | 298 308 318 328 338 348 358 368 378 388 398 | 408 418 428 || - | | 448 458 468 478 488 | 498 508 518 | 528 538 548 || 558 | 568 578 588 598 608 618 | 628| | 638 648| -| 668 678 688 698 708 718 728| | 738 748 758 768 778 788 798 808 818 828 838 848
242-MSE 258 283-MSE 294 | 403-MSE 430-MSE 440 | 491 | 524-MSE 551-MSE 562-MSE 622-MSE | | | 649 659 716-MSE 729 | |
245 286 298-MSE 431 443-MSE 498-MSE 552-MSE 629-MSE| | 732 |
634-MSE 737-MSE
638-MSE
Chain C from PDB Type:PROTEIN Length:655
aligned with CLPB_ECOLI | P63284 from UniProtKB/Swiss-Prot Length:857
Alignment length:699
168 178 188 198 208 218 228 238 248 258 268 278 288 298 308 318 328 338 348 358 368 378 388 398 408 418 428 438 448 458 468 478 488 498 508 518 528 538 548 558 568 578 588 598 608 618 628 638 648 658 668 678 688 698 708 718 728 738 748 758 768 778 788 798 808 818 828 838 848
CLPB_ECOLI 159 QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857
SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhheeehhhhhh..........hhhhhhhhhhhh................hhhhhhhhhhhhhh............eee.....------------...hhhhhhhh...........hhh....-------..hhhhhhhhh...........hhhhhhhhh..hhhh............hhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhh...--------.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...------........hhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhh...........hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.....................hhhhhhhhhhhhh..........hhh.....hhhhhh..---------..hhhhhhhh...eeeee..hhh..hhhhhhhhhhhhh.eee.....eee...eeeee...hhhhhhhh..--..hhhhhhhhhhhhhhh..hhhhhh...........hhhhhhhhhhhhhhhhhhhh.....eee.hhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhh........eeeee....eeee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------CLPAB_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CLPAB_2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4d2x C 159 QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDmGAL------------RLKGVLNDLAKQEGNVILFIDELHTmVGA-------DAGNmLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRmQIDSKPEELDRLDRRIIQLKLEQQALmK--------RLDmLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARR------mSELQYGKIPELEKQLEAATQLEGKTmRLLRNKVTDAEIAEVLARWTGIPVSRmmESEREKLLRmEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFmFDSDEAmVRIDmSEFmEKHSVSRLVGA---------GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVImTSNLGSDLIQERF--LDYAHmKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857
168 178 188 198 208 218 228 238 | | - 258 268 278 | | - | 298 308 318 328 338 348 358 368 378 388 398 | 408 418 428 || - | | 448 458 468 478 488 | 498 508 518 | 528 538 548 || 558 | 568 578 588 598 608 618 | 628| | 638 648| -| 668 678 688 698 708 718 728| | 738 748 758 768 778 788 798 808 818 828 838 848
242-MSE 258 283-MSE 294 | 403-MSE 430-MSE 440 | 491 | 524-MSE 551-MSE 562-MSE 622-MSE | | | 649 659 716-MSE 729 | |
245 286 298-MSE 431 443-MSE 498-MSE 552-MSE 629-MSE| | 732 |
634-MSE 737-MSE
638-MSE
Chain D from PDB Type:PROTEIN Length:655
aligned with CLPB_ECOLI | P63284 from UniProtKB/Swiss-Prot Length:857
Alignment length:699
168 178 188 198 208 218 228 238 248 258 268 278 288 298 308 318 328 338 348 358 368 378 388 398 408 418 428 438 448 458 468 478 488 498 508 518 528 538 548 558 568 578 588 598 608 618 628 638 648 658 668 678 688 698 708 718 728 738 748 758 768 778 788 798 808 818 828 838 848
CLPB_ECOLI 159 QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857
SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhheeehhhhhh..........hhhhhhhhhhhh................hhhhhhhhhhhhhh............eee.....------------...hhhhhhhh...........hhh....-------..hhhhhhhhh...........hhhhhhhhh..hhhh............hhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhh...--------.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...------........hhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhh...........hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.....................hhhhhhhhhhhhh..........hhh.....hhhhhh..---------..hhhhhhhh...eeeee..hhh..hhhhhhhhhhhhh.eee.....eee...eeeee...hhhhhhhh..--..hhhhhhhhhhhhhhh..hhhhhh...........hhhhhhhhhhhhhhhhhhhh.....eee.hhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhh........eeeee....eeee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------CLPAB_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CLPAB_2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4d2x D 159 QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDmGAL------------RLKGVLNDLAKQEGNVILFIDELHTmVGA-------DAGNmLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRmQIDSKPEELDRLDRRIIQLKLEQQALmK--------RLDmLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARR------mSELQYGKIPELEKQLEAATQLEGKTmRLLRNKVTDAEIAEVLARWTGIPVSRmmESEREKLLRmEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFmFDSDEAmVRIDmSEFmEKHSVSRLVGA---------GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVImTSNLGSDLIQERF--LDYAHmKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857
168 178 188 198 208 218 228 238 | | - 258 268 278 | | - | 298 308 318 328 338 348 358 368 378 388 398 | 408 418 428 || - | | 448 458 468 478 488 | 498 508 518 | 528 538 548 || 558 | 568 578 588 598 608 618 | 628| | 638 648| -| 668 678 688 698 708 718 728| | 738 748 758 768 778 788 798 808 818 828 838 848
242-MSE 258 283-MSE 294 | 403-MSE 430-MSE 440 | 491 | 524-MSE 551-MSE 562-MSE 622-MSE | | | 649 659 716-MSE 729 | |
245 286 298-MSE 431 443-MSE 498-MSE 552-MSE 629-MSE| | 732 |
634-MSE 737-MSE
638-MSE
Chain E from PDB Type:PROTEIN Length:655
aligned with CLPB_ECOLI | P63284 from UniProtKB/Swiss-Prot Length:857
Alignment length:699
168 178 188 198 208 218 228 238 248 258 268 278 288 298 308 318 328 338 348 358 368 378 388 398 408 418 428 438 448 458 468 478 488 498 508 518 528 538 548 558 568 578 588 598 608 618 628 638 648 658 668 678 688 698 708 718 728 738 748 758 768 778 788 798 808 818 828 838 848
CLPB_ECOLI 159 QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857
SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhheeehhhhhh..........hhhhhhhhhhhh................hhhhhhhhhhhhhh............eee.....------------...hhhhhhhh...........hhh....-------..hhhhhhhhh...........hhhhhhhhh..hhhh............hhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhh...--------.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...------........hhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhh...........hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.....................hhhhhhhhhhhhh..........hhh.....hhhhhh..---------..hhhhhhhh...eeeee..hhh..hhhhhhhhhhhhh.eee.....eee...eeeee...hhhhhhhh..--..hhhhhhhhhhhhhhh..hhhhhh...........hhhhhhhhhhhhhhhhhhhh.....eee.hhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhh........eeeee....eeee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------CLPAB_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CLPAB_2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4d2x E 159 QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDmGAL------------RLKGVLNDLAKQEGNVILFIDELHTmVGA-------DAGNmLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRmQIDSKPEELDRLDRRIIQLKLEQQALmK--------RLDmLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARR------mSELQYGKIPELEKQLEAATQLEGKTmRLLRNKVTDAEIAEVLARWTGIPVSRmmESEREKLLRmEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFmFDSDEAmVRIDmSEFmEKHSVSRLVGA---------GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVImTSNLGSDLIQERF--LDYAHmKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857
168 178 188 198 208 218 228 238 | | - 258 268 278 | | - | 298 308 318 328 338 348 358 368 378 388 398 | 408 418 428 || - | | 448 458 468 478 488 | 498 508 518 | 528 538 548 || 558 | 568 578 588 598 608 618 | 628| | 638 648| -| 668 678 688 698 708 718 728| | 738 748 758 768 778 788 798 808 818 828 838 848
242-MSE 258 283-MSE 294 | 403-MSE 430-MSE 440 | 491 | 524-MSE 551-MSE 562-MSE 622-MSE | | | 649 659 716-MSE 729 | |
245 286 298-MSE 431 443-MSE 498-MSE 552-MSE 629-MSE| | 732 |
634-MSE 737-MSE
638-MSE
Chain F from PDB Type:PROTEIN Length:655
aligned with CLPB_ECOLI | P63284 from UniProtKB/Swiss-Prot Length:857
Alignment length:699
168 178 188 198 208 218 228 238 248 258 268 278 288 298 308 318 328 338 348 358 368 378 388 398 408 418 428 438 448 458 468 478 488 498 508 518 528 538 548 558 568 578 588 598 608 618 628 638 648 658 668 678 688 698 708 718 728 738 748 758 768 778 788 798 808 818 828 838 848
CLPB_ECOLI 159 QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857
SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhheeehhhhhh..........hhhhhhhhhhhh................hhhhhhhhhhhhhh............eee.....------------...hhhhhhhh...........hhh....-------..hhhhhhhhh...........hhhhhhhhh..hhhh............hhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhh...--------.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...------........hhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhh...........hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.....................hhhhhhhhhhhhh..........hhh.....hhhhhh..---------..hhhhhhhh...eeeee..hhh..hhhhhhhhhhhhh.eee.....eee...eeeee...hhhhhhhh..--..hhhhhhhhhhhhhhh..hhhhhh...........hhhhhhhhhhhhhhhhhhhh.....eee.hhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhh........eeeee....eeee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------------------CLPAB_1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CLPAB_2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4d2x F 159 QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDmGAL------------RLKGVLNDLAKQEGNVILFIDELHTmVGA-------DAGNmLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRmQIDSKPEELDRLDRRIIQLKLEQQALmK--------RLDmLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARR------mSELQYGKIPELEKQLEAATQLEGKTmRLLRNKVTDAEIAEVLARWTGIPVSRmmESEREKLLRmEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFmFDSDEAmVRIDmSEFmEKHSVSRLVGA---------GGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVImTSNLGSDLIQERF--LDYAHmKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ 857
168 178 188 198 208 218 228 238 | | - 258 268 278 | | - | 298 308 318 328 338 348 358 368 378 388 398 | 408 418 428 || - | | 448 458 468 478 488 | 498 508 518 | 528 538 548 || 558 | 568 578 588 598 608 618 | 628| | 638 648| -| 668 678 688 698 708 718 728| | 738 748 758 768 778 788 798 808 818 828 838 848
242-MSE 258 283-MSE 294 | 403-MSE 430-MSE 440 | 491 | 524-MSE 551-MSE 562-MSE 622-MSE | | | 649 659 716-MSE 729 | |
245 286 298-MSE 431 443-MSE 498-MSE 552-MSE 629-MSE| | 732 |
634-MSE 737-MSE
638-MSE
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |