4CAZ - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF BETAINE ALDEHYDE DEHYDROGENASE FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH NADH

Authors :   L. Gonzalez-Segura, A. G. Diaz-Sanchez, R. A. Munoz-Clares

Date :   09 Oct 13 (Deposition) - 29 Oct 14 (Release) - 29 Oct 14 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.55

Chains :   Asym. Unit : A,B
Biol. Unit 1: A,B  (2x)

Keywords :   Aldehyde Oxidation, Nadh Complex, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. G. Diaz-Sanchez, L. Gonzalez-Segura, R. Rodriguez-Sotres, C. Mujica-Jimenez, R. A. Munoz-Clares
The Structural Bases Of The Dual Coenzyme Specificity Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
To Be Published
PubMed: search

Molecule 1 - BETAINE ALDEHYDE DEHYDROGENASE
	Chains	:	A, B
	EC Number	:	1.2.1.8
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PCALBETB
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Organism Scientific	:	PSEUDOMONAS AERUGINOSA
	Organism Taxid	:	287
	Synonym	:	BADH

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (2x)	:	A	B

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (5, 61)

No.	Name	Count	Type	Full Name
1	EDO	35	Ligand/Ion	1,2-ETHANEDIOL
2	GOL	16	Ligand/Ion	GLYCEROL
3	K	6	Ligand/Ion	POTASSIUM ION
4	PE4	2	Ligand/Ion	2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL
5	TXE	2	Ligand/Ion	[[(2R,3S,4R,5R)-5-[(3R)-3-AMINOCARBONYL-3,4-DIHYDRO-2H-PYRIDIN-1-YL]-3,4-BIS(OXIDANYL)OXOLAN-2-YL]METHOXY-OXIDANIDYL-PHOSPHORYL] [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-BIS(OXIDANYL)OXOLAN-2-YL]METHYL PHOSPHATE

Biological Unit 1 (4, 110)

No.	Name	Count	Type	Full Name
1	EDO	70	Ligand/Ion	1,2-ETHANEDIOL
2	GOL	32	Ligand/Ion	GLYCEROL
3	K	-1	Ligand/Ion	POTASSIUM ION
4	PE4	4	Ligand/Ion	2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL
5	TXE	4	Ligand/Ion	[[(2R,3S,4R,5R)-5-[(3R)-3-AMINOCARBONYL-3,4-DIHYDRO-2H-PYRIDIN-1-YL]-3,4-BIS(OXIDANYL)OXOLAN-2-YL]METHOXY-OXIDANIDYL-PHOSPHORYL] [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-BIS(OXIDANYL)OXOLAN-2-YL]METHYL PHOSPHATE

Asymmetric Unit (58, 58)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ARG A:70 , ARG A:74 , ASP A:77	BINDING SITE FOR RESIDUE EDO A1491
02	AC2	SOFTWARE	PHE A:331 , ARG A:357 , EDO A:1494 , ASP B:264 , ALA B:265 , EDO B:1494	BINDING SITE FOR RESIDUE EDO A1492
03	AC3	SOFTWARE	ARG B:14 , VAL B:16 , GLU B:17 , ARG B:48	BINDING SITE FOR RESIDUE EDO B1491
04	AC4	SOFTWARE	GLU B:446 , PRO B:448 , EDO B:1495 , PE4 B:1505 , GOL B:1512 , HOH B:2065	BINDING SITE FOR RESIDUE EDO B1492
05	AC5	SOFTWARE	ARG B:140 , ALA B:169 , HOH B:2042	BINDING SITE FOR RESIDUE EDO B1493
06	AC6	SOFTWARE	MET A:276 , GLY A:445 , PE4 A:1511 , HOH A:2191	BINDING SITE FOR RESIDUE EDO A1493
07	AC7	SOFTWARE	PHE A:331 , PRO A:332 , GLU A:335 , EDO A:1492 , SER B:297 , ARG B:301	BINDING SITE FOR RESIDUE EDO A1494
08	AC8	SOFTWARE	EDO A:1492 , ASP B:266 , LEU B:267 , ASP B:268 , ARG B:301 , LYS B:305	BINDING SITE FOR RESIDUE EDO B1494
09	AC9	SOFTWARE	THR B:108 , SER B:447 , EDO B:1492 , PE4 B:1505 , K B:1508 , GOL B:1511	BINDING SITE FOR RESIDUE EDO B1495
10	BC1	SOFTWARE	ILE A:123 , ARG A:140 , PRO A:142 , ALA A:169 , HOH A:2112	BINDING SITE FOR RESIDUE EDO A1495
11	BC2	SOFTWARE	ASP A:360 , GLY A:361 , ALA A:362	BINDING SITE FOR RESIDUE EDO A1496
12	BC3	SOFTWARE	GLN B:7 , LYS B:187	BINDING SITE FOR RESIDUE EDO B1496
13	BC4	SOFTWARE	ARG B:131 , THR B:133 , GLU B:482 , ASP B:485	BINDING SITE FOR RESIDUE EDO B1497
14	BC5	SOFTWARE	ALA B:300 , GLU B:303	BINDING SITE FOR RESIDUE EDO B1498
15	BC6	SOFTWARE	ARG A:43 , TRP A:215 , HOH A:2051	BINDING SITE FOR RESIDUE EDO A1497
16	BC7	SOFTWARE	GLU A:126 , HOH A:2114	BINDING SITE FOR RESIDUE EDO A1498
17	BC8	SOFTWARE	ASP A:423 , ARG A:426	BINDING SITE FOR RESIDUE EDO A1499
18	BC9	SOFTWARE	ASN B:409 , ARG B:433	BINDING SITE FOR RESIDUE EDO B1499
19	CC1	SOFTWARE	EDO A:1501	BINDING SITE FOR RESIDUE EDO A1527
20	CC2	SOFTWARE	GLU A:303 , ARG A:350 , EDO A:1527	BINDING SITE FOR RESIDUE EDO A1501
21	CC3	SOFTWARE	TYR B:413 , GLN B:458 , HOH B:2115 , HOH B:2163 , HOH B:2198	BINDING SITE FOR RESIDUE EDO B1500
22	CC4	SOFTWARE	PHE B:262 , GLU B:401 , ASP B:402 , ARG B:433	BINDING SITE FOR RESIDUE EDO B1501
23	CC5	SOFTWARE	ARG A:301 , ASP A:317 , ASP A:320	BINDING SITE FOR RESIDUE EDO A1502
24	CC6	SOFTWARE	ASN A:31 , ASP A:317 , EDO A:1504 , GOL A:1524	BINDING SITE FOR RESIDUE EDO A1503
25	CC7	SOFTWARE	ALA A:265 , LEU A:267 , ARG A:301 , ASP A:317 , GLN A:319 , EDO A:1503	BINDING SITE FOR RESIDUE EDO A1504
26	CC8	SOFTWARE	ASP B:266 , HOH B:2135	BINDING SITE FOR RESIDUE EDO B1502
27	CC9	SOFTWARE	GLU A:248 , GLY A:455 , GLY A:462 , ARG A:463 , ARG A:475 , HOH A:2276 , HOH A:2278	BINDING SITE FOR RESIDUE EDO A1505
28	DC1	SOFTWARE	ALA A:65 , VAL A:120 , PRO A:121 , ILE A:123 , GOL A:1522 , PRO B:129 , GLU B:450	BINDING SITE FOR RESIDUE EDO A1506
29	DC2	SOFTWARE	ARG A:139 , HIS A:432 , GOL A:1522 , HOH A:2257 , HOH A:2291 , PRO B:129 , HOH B:2077	BINDING SITE FOR RESIDUE EDO A1507
30	DC3	SOFTWARE	ASP A:379 , ASP A:380 , ARG A:385 , ASP A:410	BINDING SITE FOR RESIDUE EDO A1508
31	DC4	SOFTWARE	GLU A:401 , ILE A:405 , ARG A:426 , ARG A:433	BINDING SITE FOR RESIDUE EDO A1509
32	DC5	SOFTWARE	ALA A:265 , ASP A:266 , THR A:421 , GLN A:422 , ASN A:442	BINDING SITE FOR RESIDUE EDO A1510
33	DC6	SOFTWARE	GLU B:252 , GOL B:1511 , TXE B:1514	BINDING SITE FOR RESIDUE EDO B1504
34	DC7	SOFTWARE	SER B:103 , MET B:276 , TRP B:444 , GLU B:446 , VAL B:489 , EDO B:1492 , EDO B:1495 , K B:1508	BINDING SITE FOR RESIDUE PE4 B1505
35	DC8	SOFTWARE	VAL A:104 , GLU A:446 , EDO A:1493 , K A:1514	BINDING SITE FOR RESIDUE PE4 A1511
36	DC9	SOFTWARE	THR A:26 , ILE A:27 , ASP A:93 , VAL A:180 , HOH A:2039	BINDING SITE FOR RESIDUE K A1512
37	EC1	SOFTWARE	THR B:26 , ILE B:27 , ASP B:93 , VAL B:180 , HOH B:2018	BINDING SITE FOR RESIDUE K B1506
38	EC2	SOFTWARE	GLU A:223 , LEU A:246 , GLU A:248 , LYS A:457 , GLY A:460	BINDING SITE FOR RESIDUE K A1513
39	EC3	SOFTWARE	GLU B:223 , LEU B:246 , GLU B:248 , LYS B:457 , GLY B:460	BINDING SITE FOR RESIDUE K B1507
40	EC4	SOFTWARE	PE4 A:1511	BINDING SITE FOR RESIDUE K A1514
41	EC5	SOFTWARE	EDO B:1495 , PE4 B:1505	BINDING SITE FOR RESIDUE K B1508
42	EC6	SOFTWARE	LEU A:315 , ASP A:317 , ASP A:320 , ASN A:322 , THR A:323 , HOH A:2205	BINDING SITE FOR RESIDUE GOL A1516
43	EC7	SOFTWARE	ARG A:378 , ASP A:380	BINDING SITE FOR RESIDUE GOL A1517
44	EC8	SOFTWARE	HOH B:2200	BINDING SITE FOR RESIDUE GOL B1509
45	EC9	SOFTWARE	GLU B:5 , GLU B:6 , GLN B:7 , LYS B:8 , TYR B:15	BINDING SITE FOR RESIDUE GOL B1510
46	FC1	SOFTWARE	GLU A:5 , GLU A:6 , GLN A:7 , LYS A:8 , TYR A:15 , GOL A:1519 , HOH A:2143	BINDING SITE FOR RESIDUE GOL A1518
47	FC2	SOFTWARE	PHE A:4 , GLN A:7 , LYS A:187 , GOL A:1518 , HOH A:2012	BINDING SITE FOR RESIDUE GOL A1519
48	FC3	SOFTWARE	ARG A:139 , GLU A:141 , HIS A:432 , LEU A:434 , LYS A:477	BINDING SITE FOR RESIDUE GOL A1520
49	FC4	SOFTWARE	ASP A:199	BINDING SITE FOR RESIDUE GOL A1521
50	FC5	SOFTWARE	ALA A:61 , MET A:63 , ALA A:65 , ARG A:68 , EDO A:1506 , EDO A:1507 , ARG B:131	BINDING SITE FOR RESIDUE GOL A1522
51	FC6	SOFTWARE	GLN B:157 , EDO B:1495 , EDO B:1504 , HOH B:2090	BINDING SITE FOR RESIDUE GOL B1511
52	FC7	SOFTWARE	TRP A:161 , GLU A:252 , LEU A:415 , GLU A:464 , GOL A:1525 , TXE A:1526 , HOH A:2266	BINDING SITE FOR RESIDUE GOL A1523
53	FC8	SOFTWARE	HOH A:2071 , ASP B:111 , PRO B:448 , ALA B:449 , GLU B:450 , EDO B:1492 , HOH B:2065	BINDING SITE FOR RESIDUE GOL B1512
54	FC9	SOFTWARE	ALA B:30 , ASP B:317 , PHE B:363 , TYR B:368	BINDING SITE FOR RESIDUE GOL B1513
55	GC1	SOFTWARE	ALA A:30 , ASP A:317 , ALA A:362 , PHE A:363 , TYR A:368 , EDO A:1503	BINDING SITE FOR RESIDUE GOL A1524
56	GC2	SOFTWARE	TYR A:154 , GLN A:157 , TRP A:161 , GOL A:1523 , HOH A:2134 , HOH A:2294	BINDING SITE FOR RESIDUE GOL A1525
57	GC3	SOFTWARE	ILE A:149 , GLY A:150 , ALA A:151 , TRP A:152 , ASN A:153 , LYS A:176 , SER A:178 , GLU A:179 , GLY A:209 , GLY A:213 , GLN A:214 , PHE A:227 , THR A:228 , GLY A:229 , GLY A:230 , THR A:233 , VAL A:237 , GLU A:252 , LEU A:253 , GLY A:254 , CYS A:286 , GLU A:387 , PHE A:389 , GOL A:1523 , HOH A:2134 , HOH A:2140 , HOH A:2157 , HOH A:2295	BINDING SITE FOR RESIDUE TXD A1526
58	GC4	SOFTWARE	ILE B:149 , GLY B:150 , ALA B:151 , TRP B:152 , ASN B:153 , LYS B:176 , SER B:178 , GLU B:179 , GLY B:209 , GLY B:213 , GLN B:214 , PHE B:227 , THR B:228 , GLY B:229 , GLY B:230 , THR B:233 , VAL B:237 , GLU B:252 , LEU B:253 , GLY B:254 , CYS B:286 , GLU B:387 , PHE B:389 , EDO B:1504 , HOH B:2095	BINDING SITE FOR RESIDUE TXD B1514

(no "SS Bond" information available for 4CAZ)

(no "Cis Peptide Bond" information available for 4CAZ)

(no "SAP(SNP)/Variant" information available for 4CAZ)

Asymmetric Unit (2, 4)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ALDEHYDE_DEHYDR_GLU	PS00687	Aldehyde dehydrogenases glutamic acid active site.	BETB_PSEAE	251-258	2	A:251-258 B:251-258
2	ALDEHYDE_DEHYDR_CYS	PS00070	Aldehyde dehydrogenases cysteine active site.	BETB_PSEAE	279-290	2	A:279-290 B:279-290

Biological Unit 1 (2, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	ALDEHYDE_DEHYDR_GLU	PS00687	Aldehyde dehydrogenases glutamic acid active site.	BETB_PSEAE	251-258	4	A:251-258 B:251-258
2	ALDEHYDE_DEHYDR_CYS	PS00070	Aldehyde dehydrogenases cysteine active site.	BETB_PSEAE	279-290	4	A:279-290 B:279-290

(no "Exon" information available for 4CAZ)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:489
 aligned with BETB_PSEAE | Q9HTJ1 from UniProtKB/Swiss-Prot  Length:490

    Alignment length:489
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481         
           BETB_PSEAE     2 ARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGDYASVF 490
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......ee....ee......eeeee......eeeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh.hhhhhhhhhhhhhhhhhhhh...eeeee..eeeeeeeee..eeeee....hhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhhhhh.....eee......hhhhhhhhh....eeeee.hhhhhhhhhhhhhhhhh.eeeee.....eeee....hhhhhhhhhhhhhhhhhhh......eeeee..hhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhhhh..eeee......hhhhhhh.....eeee.....hhhhhh.....eeeeeee.hhhhhhhhhhh.....eeeee..hhhhhhhhhhhh...eeee..............hhh.ee...hhhhhhhh.eeeeeeeee........ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALDEHYDE--------------------ALDEHYDE_DEH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4caz A   2 ARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGDYASVF 490
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481

Chain B from PDB  Type:PROTEIN  Length:489
 aligned with BETB_PSEAE | Q9HTJ1 from UniProtKB/Swiss-Prot  Length:490

    Alignment length:489
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481         
           BETB_PSEAE     2 ARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGDYASVF 490
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eee..eee......eeeee......eeeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh.hhhhhhhhhhhhhhhhhhhh...eeeee..eeeeeeeee..eeeee....hhhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhhhhh.....eee......hhhhhhhhh....eeeee.hhhhhhhhhhhhhhhhh.eeeee.....eeee....hhhhhhhhhhhhhhhhhhh......eeeee..hhhhhhhhhhhhhh..................hhhhhhhhhhhhhhhhhh..eeee........hhhhh.....eeee.....hhhhhh.....eeeeeee.hhhhhhhhhhh.....eeeee..hhhhhhhhhhhh...eeee..............hhh.ee...hhhhhhhh.eeeeeeeee........ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALDEHYDE--------------------ALDEHYDE_DEH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4caz B   2 ARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVELGDYASVF 490
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 4CAZ)

(no "CATH Domain" information available for 4CAZ)

(no "Pfam Domain" information available for 4CAZ)

Asymmetric Unit(hide GO term definitions)

Chain A,B (BETB_PSEAE | Q9HTJ1)

molecular function
	GO:0047105	4-trimethylammoniobutyraldehyde dehydrogenase activity	Catalysis of the reaction: NAD+ + 4-trimethylammoniobutanal = NADH + 4-trimethylammoniobutanoate.
	GO:0019145	aminobutyraldehyde dehydrogenase activity	Catalysis of the reaction: 4-aminobutanal + NAD+ + H2O = 4-aminobutanoate + NADH + 2 H+.
	GO:0008802	betaine-aldehyde dehydrogenase activity	Catalysis of the reaction: betaine aldehyde + NAD+ + H2O = betaine + NADH + H+.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
biological process
	GO:0019285	glycine betaine biosynthetic process from choline	The chemical reactions and pathways resulting in the formation of betaine (N-trimethylglycine) from the oxidation of choline.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Asymmetric Unit
	Complete Structure
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	Ligands, Modified Residues, Ions
		EDO	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		GOL	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		K	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		PE4	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		TXE	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
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		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]
		AC4	[ RasMol ]	+environment [ RasMol ]
		AC5	[ RasMol ]	+environment [ RasMol ]
		AC6	[ RasMol ]	+environment [ RasMol ]
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	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 4caz)

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	Complete Structure
		Biological Unit 1	[ Jena3D ]

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Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

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	4caz
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	1.2.1.8
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	BETB_PSEAE \| Q9HTJ1	:	2wme 2wox 2xdr 3zqa 4cbb

(no "Related Entries Specified in the PDB File" available for 4CAZ)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (5, 61)

Sites (58, 58)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (2, 4)

Exons (0, 0)

Sequences/Alignments

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SCOP Domains (0, 0)

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Pfam Domains (0, 0)

Gene Ontology (9, 9)

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Related Entries Specified in the PDB File