4CAF - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Title :   PLASMODIUM VIVAX N-MYRISTOYLTRANSFERASE IN COMPLEX WITH A BENZOTHIOPHENE INHIBITOR (COMPOUND 34A)

Authors :   M. D. Rackham, J. A. Brannigan, K. Rangachari, A. J. Wilkinson, A. A. Hol E. W. Tate, R. J. Leatherbarrow

Date :   08 Oct 13 (Deposition) - 02 Apr 14 (Release) - 09 Apr 14 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.70

Chains :   Asym. Unit : A,B,C
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: C  (1x)

Keywords :   Transferase, Myristoylation, Malaria, Inhibitor, Benzothiophene (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   M. D. Rackham, J. A. Brannigan, K. Rangachari, S. Meister, A. J. Wilkinson, A. A. Holder, R. J. Leatherbarrow, E. W. Tate
Design And Synthesis Of High Affinity Inhibitors Of Plasmodium Falciparum And Plasmodium Vivax N- Myristoyltransferases Directed By Ligand Efficiency Dependent Lipophilicity (Lelp).
J. Med. Chem. V. 57 2773 2014
PubMed-ID: 24641010 | Reference-DOI: 10.1021/JM500066B

Molecule 1 - GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE
	Chains	:	A, B, C
	EC Number	:	2.3.1.97
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Variant	:	PLYSS
	Expression System Vector	:	PET28
	Expression System Vector Type	:	PLASMID
	Fragment	:	RESIDUES 27-410
	Organism Common	:	MALARIA PARASITE P. VIVAX
	Organism Scientific	:	PLASMODIUM VIVAX
	Organism Taxid	:	5855

		1	2	3
Asymmetric Unit	:	A	B	C
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:			C

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (7, 21)

No.	Name	Count	Type	Full Name
1	370	3	Ligand/Ion	4-[(2-{5-[(3,5-DIMETHYL-1H-PYRAZOL-4-YL)METHYL]-1,3,4-OXADIAZOL-2-YL}-1-BENZOTHIOPHEN-3-YL)OXY]PIPERIDINE
2	CL	3	Ligand/Ion	CHLORIDE ION
3	DMS	5	Ligand/Ion	DIMETHYL SULFOXIDE
4	MG	3	Ligand/Ion	MAGNESIUM ION
5	NH4	3	Ligand/Ion	AMMONIUM ION
6	NHW	3	Ligand/Ion	2-OXOPENTADECYL-COA
7	SO4	1	Ligand/Ion	SULFATE ION

Biological Unit 1 (5, 6)

No.	Name	Count	Type	Full Name
1	370	1	Ligand/Ion	4-[(2-{5-[(3,5-DIMETHYL-1H-PYRAZOL-4-YL)METHYL]-1,3,4-OXADIAZOL-2-YL}-1-BENZOTHIOPHEN-3-YL)OXY]PIPERIDINE
2	CL	-1	Ligand/Ion	CHLORIDE ION
3	DMS	2	Ligand/Ion	DIMETHYL SULFOXIDE
4	MG	-1	Ligand/Ion	MAGNESIUM ION
5	NH4	1	Ligand/Ion	AMMONIUM ION
6	NHW	1	Ligand/Ion	2-OXOPENTADECYL-COA
7	SO4	1	Ligand/Ion	SULFATE ION

Biological Unit 2 (4, 5)

No.	Name	Count	Type	Full Name
1	370	1	Ligand/Ion	4-[(2-{5-[(3,5-DIMETHYL-1H-PYRAZOL-4-YL)METHYL]-1,3,4-OXADIAZOL-2-YL}-1-BENZOTHIOPHEN-3-YL)OXY]PIPERIDINE
2	CL	-1	Ligand/Ion	CHLORIDE ION
3	DMS	2	Ligand/Ion	DIMETHYL SULFOXIDE
4	MG	-1	Ligand/Ion	MAGNESIUM ION
5	NH4	1	Ligand/Ion	AMMONIUM ION
6	NHW	1	Ligand/Ion	2-OXOPENTADECYL-COA
7	SO4	-1	Ligand/Ion	SULFATE ION

Biological Unit 3 (4, 4)

No.	Name	Count	Type	Full Name
1	370	1	Ligand/Ion	4-[(2-{5-[(3,5-DIMETHYL-1H-PYRAZOL-4-YL)METHYL]-1,3,4-OXADIAZOL-2-YL}-1-BENZOTHIOPHEN-3-YL)OXY]PIPERIDINE
2	CL	-1	Ligand/Ion	CHLORIDE ION
3	DMS	1	Ligand/Ion	DIMETHYL SULFOXIDE
4	MG	-1	Ligand/Ion	MAGNESIUM ION
5	NH4	1	Ligand/Ion	AMMONIUM ION
6	NHW	1	Ligand/Ion	2-OXOPENTADECYL-COA
7	SO4	-1	Ligand/Ion	SULFATE ION

Asymmetric Unit (21, 21)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	TYR A:28 , LYS A:29 , PHE A:30 , TRP A:31 , ASN A:94 , TYR A:95 , VAL A:96 , ASN A:161 , PHE A:162 , LEU A:163 , CYS A:164 , VAL A:165 , ARG A:170 , SER A:171 , LYS A:172 , ARG A:173 , LEU A:174 , ALA A:175 , PRO A:176 , THR A:183 , ILE A:186 , ASN A:187 , TRP A:192 , GLN A:193 , ALA A:194 , THR A:197 , LEU A:202 , TYR A:393 , MG A:1415 , HOH A:2001 , HOH A:2002 , HOH A:2279 , HOH A:2287 , HOH A:2524 , HOH A:2525 , HOH A:2526 , HOH A:2527 , HOH A:2528 , HOH A:2529	BINDING SITE FOR RESIDUE NHW A1422
02	AC2	SOFTWARE	TYR B:28 , LYS B:29 , PHE B:30 , TRP B:31 , ASN B:94 , TYR B:95 , VAL B:96 , ASN B:161 , PHE B:162 , LEU B:163 , CYS B:164 , VAL B:165 , ARG B:170 , SER B:171 , LYS B:172 , ARG B:173 , LEU B:174 , ALA B:175 , PRO B:176 , THR B:183 , ILE B:186 , ASN B:187 , TRP B:192 , GLN B:193 , TYR B:196 , THR B:197 , LEU B:202 , TYR B:393 , MG B:1414 , HOH B:2002 , HOH B:2003 , HOH B:2244 , HOH B:2250 , HOH B:2251 , HOH B:2484 , HOH B:2485 , HOH B:2486 , HOH B:2487 , HOH B:2488 , HOH B:2489	BINDING SITE FOR RESIDUE NHW B1422
03	AC3	SOFTWARE	TYR C:28 , LYS C:29 , PHE C:30 , TRP C:31 , ASN C:94 , TYR C:95 , VAL C:96 , ASN C:161 , PHE C:162 , LEU C:163 , CYS C:164 , VAL C:165 , ARG C:170 , SER C:171 , LYS C:172 , ARG C:173 , LEU C:174 , ALA C:175 , PRO C:176 , THR C:183 , ILE C:186 , TRP C:192 , ALA C:194 , TYR C:196 , THR C:197 , LEU C:202 , TYR C:393 , MG C:1413 , HOH C:2002 , HOH C:2225 , HOH C:2230 , HOH C:2231 , HOH C:2422 , HOH C:2423 , HOH C:2425 , HOH C:2426 , HOH C:2427	BINDING SITE FOR RESIDUE NHW C1422
04	AC4	SOFTWARE	ASP A:98 , PHE A:105 , TYR A:107 , THR A:197 , TYR A:211 , HIS A:213 , TYR A:315 , SER A:319 , TYR A:334 , SER A:335 , ASN A:365 , ALA A:366 , LEU A:367 , LEU A:388 , VAL A:408 , LEU A:409 , LEU A:410 , NH4 A:1416 , HOH A:2306 , HOH A:2457 , HOH A:2521	BINDING SITE FOR RESIDUE 370 A1411
05	AC5	SOFTWARE	ASP B:98 , PHE B:105 , TYR B:107 , THR B:197 , TYR B:211 , HIS B:213 , TYR B:315 , SER B:319 , TYR B:334 , SER B:335 , ASN B:365 , ALA B:366 , LEU B:367 , LEU B:388 , LEU B:409 , LEU B:410 , NH4 B:1415 , HOH B:2268 , HOH B:2424 , HOH B:2483	BINDING SITE FOR RESIDUE 370 B1411
06	AC6	SOFTWARE	ASP C:98 , PHE C:105 , TYR C:107 , THR C:197 , TYR C:211 , HIS C:213 , TYR C:315 , SER C:319 , TYR C:334 , SER C:335 , ASN C:365 , ALA C:366 , LEU C:367 , VAL C:408 , LEU C:409 , LEU C:410 , NH4 C:1414 , HOH C:2245 , HOH C:2368 , HOH C:2421	BINDING SITE FOR RESIDUE 370 C1411
07	AC7	SOFTWARE	GLU B:159 , PHE B:281 , TRP B:289 , HOH B:2427	BINDING SITE FOR RESIDUE DMS B1412
08	AC8	SOFTWARE	ASN A:295 , TYR A:298 , SER A:316 , ASN A:331 , ASN A:359	BINDING SITE FOR RESIDUE DMS A1412
09	AC9	SOFTWARE	ASN B:295 , TYR B:298 , SER B:316 , ASN B:331 , ASN B:359 , PHE B:361	BINDING SITE FOR RESIDUE DMS B1413
10	BC1	SOFTWARE	GLU A:159 , PHE A:281 , TRP A:289 , HOH A:2460	BINDING SITE FOR RESIDUE DMS A1413
11	BC2	SOFTWARE	GLU C:159 , PHE C:281 , TRP C:289 , HOH C:2371	BINDING SITE FOR RESIDUE DMS C1412
12	BC3	SOFTWARE	ARG A:210 , LYS A:373 , HOH A:2522 , ARG B:210 , LYS B:373	BINDING SITE FOR RESIDUE SO4 A1414
13	BC4	SOFTWARE	LEU C:169 , SER C:171 , LYS C:172 , ARG C:173 , LEU C:174 , NHW C:1422	BINDING SITE FOR RESIDUE MG C1413
14	BC5	SOFTWARE	LEU B:169 , SER B:171 , LYS B:172 , ARG B:173 , LEU B:174 , NHW B:1422	BINDING SITE FOR RESIDUE MG B1414
15	BC6	SOFTWARE	LEU A:169 , SER A:171 , LYS A:172 , ARG A:173 , LEU A:174 , NHW A:1422	BINDING SITE FOR RESIDUE MG A1415
16	BC7	SOFTWARE	ASN B:161 , THR B:197 , LEU B:410 , 370 B:1411 , HOH B:2235	BINDING SITE FOR RESIDUE NH4 B1415
17	BC8	SOFTWARE	ASN C:161 , THR C:197 , LEU C:410 , 370 C:1411 , HOH C:2213	BINDING SITE FOR RESIDUE NH4 C1414
18	BC9	SOFTWARE	ASN A:161 , THR A:197 , LEU A:410 , 370 A:1411 , HOH A:2266	BINDING SITE FOR RESIDUE NH4 A1416
19	CC1	SOFTWARE	LYS A:180 , THR A:247 , LEU A:248 , ARG A:358	BINDING SITE FOR RESIDUE CL A1417
20	CC2	SOFTWARE	LYS C:180 , THR C:247 , LEU C:248 , ARG C:358	BINDING SITE FOR RESIDUE CL C1415
21	CC3	SOFTWARE	LYS B:180 , THR B:247 , LEU B:248 , ARG B:358 , HOH B:2340	BINDING SITE FOR RESIDUE CL B1416

(no "SS Bond" information available for 4CAF)

Asymmetric Unit

No.	Residues
1	Pro A:203	-	Lys A:204
2	Pro B:203	-	Lys B:204
3	Pro C:203	-	Lys C:204

(no "SAP(SNP)/Variant" information available for 4CAF)

(no "PROSITE Motif" information available for 4CAF)

(no "Exon" information available for 4CAF)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:384
 aligned with A5K1A2_PLAVS | A5K1A2 from UniProtKB/TrEMBL  Length:410

    Alignment length:384
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406    
         A5K1A2_PLAVS    27 DYKFWYTQPVPKINDEFNESVNEPFISDNKVEDVRKDEYKLPPGYSWYVCDVKDEKDRSEIYTLLTDNYVEDDDNIFRFNYSAEFLLWALTSPNYLKTWHIGVKYDASNKLIGFISAIPTDICIHKRTIKMAEVNFLCVHKTLRSKRLAPVLIKEITRRINLENIWQAIYTAGVYLPKPVSDARYYHRSINVKKLIEIGFSSLNSRLTMSRAIKLYRVEDTLNIKNMRLMKKKDVEGVHKLLGSYLEQFNLYAVFTKEEIAHWFLPIENVIYTYVNEENGKIKDMISFYSLPSQILGNDKYSTLNAAYSFYNVTTTATFKQLMQDAILLAKRNNFDVFNALEVMQNKSVFEDLKFGEGDGSLKYYLYNWKCASFAPAHVGIVLL 410
               SCOP domains d4cafa1 A:27-210 automated matches                                                                                                                                                      -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhh.............ee......hhhhh..........eeeee....hhhhhhhhhhhhhhhh.......eee..hhhhhhhhhh....hhh.eeeeee....eeeeeeeeeeeeeee..eeeeeeeeeeeee.hhhh..hhhhhhhhhhhhhhhhh...eeeeee........eeeeeeeee.hhhhhhhh.........hhhhhhhhh...........ee.hhhhhhhhhhhhhhhhh...eee..hhhhhhhhhh.....eeeeeeee..eeeeeeeeee..eee.......ee.eeee...ee...hhhhhhhhhhhhhhhh...eeeee...hhhhhh.....eeeeeeeeeeee..ee...hhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4caf A  27 DYKFWYTQPVPKINDEFNESVNEPFISDNKVEDVRKDEYKLPPGYSWYVCDVKDEKDRSEIYTLLTDNYVEDDDNIFRFNYSAEFLLWALTSPNYLKTWHIGVKYDASNKLIGFISAIPTDICIHKRTIKMAEVNFLCVHKTLRSKRLAPVLIKEITRRINLENIWQAIYTAGVYLPKPVSDARYYHRSINVKKLIEIGFSSLNSRLTMSRAIKLYRVEDTLNIKNMRLMKKKDVEGVHKLLGSYLEQFNLYAVFTKEEIAHWFLPIENVIYTYVNEENGKIKDMISFYSLPSQILGNDKYSTLNAAYSFYNVTTTATFKQLMQDAILLAKRNNFDVFNALEVMQNKSVFEDLKFGEGDGSLKYYLYNWKCASFAPAHVGIVLL 410
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406

Chain B from PDB  Type:PROTEIN  Length:384
 aligned with A5K1A2_PLAVS | A5K1A2 from UniProtKB/TrEMBL  Length:410

    Alignment length:384
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406    
         A5K1A2_PLAVS    27 DYKFWYTQPVPKINDEFNESVNEPFISDNKVEDVRKDEYKLPPGYSWYVCDVKDEKDRSEIYTLLTDNYVEDDDNIFRFNYSAEFLLWALTSPNYLKTWHIGVKYDASNKLIGFISAIPTDICIHKRTIKMAEVNFLCVHKTLRSKRLAPVLIKEITRRINLENIWQAIYTAGVYLPKPVSDARYYHRSINVKKLIEIGFSSLNSRLTMSRAIKLYRVEDTLNIKNMRLMKKKDVEGVHKLLGSYLEQFNLYAVFTKEEIAHWFLPIENVIYTYVNEENGKIKDMISFYSLPSQILGNDKYSTLNAAYSFYNVTTTATFKQLMQDAILLAKRNNFDVFNALEVMQNKSVFEDLKFGEGDGSLKYYLYNWKCASFAPAHVGIVLL 410
               SCOP domains d4cafb1 B:27-210 automated matches                                                                                                                                                      -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhh.............ee......hhhhh..........eeeee....hhhhhhhhhhhhhhhh.......eee..hhhhhhhhhh....hhh.eeeeee....eeeeeeeeeeeeeee..eeeeeeeeeeeee.hhhh..hhhhhhhhhhhhhhhh.....eeeee........eeeeeeeee.hhhhhhhh.........hhhhhhhhhh..........ee.hhhhhhhhhhhhhhhhh...eee..hhhhhhhhhh.....eeeeeeee..eeeeeeeeee..eee.......ee.eeee...ee...hhhhhhhhhhhhhhhh...eeeee...hhhhhh.....eeeeeeeeeeee..ee...hhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4caf B  27 DYKFWYTQPVPKINDEFNESVNEPFISDNKVEDVRKDEYKLPPGYSWYVCDVKDEKDRSEIYTLLTDNYVEDDDNIFRFNYSAEFLLWALTSPNYLKTWHIGVKYDASNKLIGFISAIPTDICIHKRTIKMAEVNFLCVHKTLRSKRLAPVLIKEITRRINLENIWQAIYTAGVYLPKPVSDARYYHRSINVKKLIEIGFSSLNSRLTMSRAIKLYRVEDTLNIKNMRLMKKKDVEGVHKLLGSYLEQFNLYAVFTKEEIAHWFLPIENVIYTYVNEENGKIKDMISFYSLPSQILGNDKYSTLNAAYSFYNVTTTATFKQLMQDAILLAKRNNFDVFNALEVMQNKSVFEDLKFGEGDGSLKYYLYNWKCASFAPAHVGIVLL 410
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406

Chain C from PDB  Type:PROTEIN  Length:373
 aligned with A5K1A2_PLAVS | A5K1A2 from UniProtKB/TrEMBL  Length:410

    Alignment length:384
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406    
         A5K1A2_PLAVS    27 DYKFWYTQPVPKINDEFNESVNEPFISDNKVEDVRKDEYKLPPGYSWYVCDVKDEKDRSEIYTLLTDNYVEDDDNIFRFNYSAEFLLWALTSPNYLKTWHIGVKYDASNKLIGFISAIPTDICIHKRTIKMAEVNFLCVHKTLRSKRLAPVLIKEITRRINLENIWQAIYTAGVYLPKPVSDARYYHRSINVKKLIEIGFSSLNSRLTMSRAIKLYRVEDTLNIKNMRLMKKKDVEGVHKLLGSYLEQFNLYAVFTKEEIAHWFLPIENVIYTYVNEENGKIKDMISFYSLPSQILGNDKYSTLNAAYSFYNVTTTATFKQLMQDAILLAKRNNFDVFNALEVMQNKSVFEDLKFGEGDGSLKYYLYNWKCASFAPAHVGIVLL 410
               SCOP domains d4cafc1 C:27-210 automated matches                                                                                                                                                      -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhh.............ee......hhhhh..........eeeee....hhhhhhhhhhhhhhhh.......eee..hhhhhhhhhh....hhh.eeeeee.....eeeeeeeeeeeeee..eeeeeeeeeeeee.hhhh...hhhhhhhhhhhhhhh....eeeeee........eeeeeeeee.hhhhhhhhh.-----------................ee.hhhhhhhhhhhhhhhhh...eee..hhhhhhhhhh.....eeeeeeee..eeeeeeeeee..eee.......ee.eeee...ee...hhhhhhhhhhhhhhhh...eeeee...hhhhhh.....eeeeeeeeeeee..ee...hhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4caf C  27 DYKFWYTQPVPKINDEFNESVNEPFISDNKVEDVRKDEYKLPPGYSWYVCDVKDEKDRSEIYTLLTDNYVEDDDNIFRFNYSAEFLLWALTSPNYLKTWHIGVKYDASNKLIGFISAIPTDICIHKRTIKMAEVNFLCVHKTLRSKRLAPVLIKEITRRINLENIWQAIYTAGVYLPKPVSDARYYHRSINVKKLIEIGF-----------AIKLYRVEDTLNIKNMRLMKKKDVEGVHKLLGSYLEQFNLYAVFTKEEIAHWFLPIENVIYTYVNEENGKIKDMISFYSLPSQILGNDKYSTLNAAYSFYNVTTTATFKQLMQDAILLAKRNNFDVFNALEVMQNKSVFEDLKFGEGDGSLKYYLYNWKCASFAPAHVGIVLL 410
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226         - |     246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406    
                                                                                                                                                                                                                                 226         238

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a+b) (23004)

Fold: Acyl-CoA N-acyltransferases (Nat) (250)

Superfamily: Acyl-CoA N-acyltransferases (Nat) (250)

Family: automated matches (63)

Protein domain: automated matches (63)

Plasmodium vivax [TaxId: 5855] (6)

1a	d4cafa1	A:27-210
1b	d4cafb1	B:27-210
1c	d4cafc1	C:27-210

(no "CATH Domain" information available for 4CAF)

(no "Pfam Domain" information available for 4CAF)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C (A5K1A2_PLAVS | A5K1A2)

molecular function
	GO:0004379	glycylpeptide N-tetradecanoyltransferase activity	Catalysis of the reaction: tetradecanoyl-CoA + glycyl-peptide = CoA + N-tetradecanoylglycyl-peptide.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
	GO:0016746	transferase activity, transferring acyl groups	Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
biological process
	GO:0006499	N-terminal protein myristoylation	The covalent attachment of a myristoyl group to the N-terminal amino acid residue of a protein.

Asymmetric Unit
	Complete Structure
		Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
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		RasMol (require local installation)
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	Ligands, Modified Residues, Ions
		370	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		CL	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		DMS	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		MG	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		NH4	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		NHW	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		SO4	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]
		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]
		AC4	[ RasMol ]	+environment [ RasMol ]
		AC5	[ RasMol ]	+environment [ RasMol ]
		AC6	[ RasMol ]	+environment [ RasMol ]
		AC7	[ RasMol ]	+environment [ RasMol ]
		AC8	[ RasMol ]	+environment [ RasMol ]
		AC9	[ RasMol ]	+environment [ RasMol ]
		BC1	[ RasMol ]	+environment [ RasMol ]
		BC2	[ RasMol ]	+environment [ RasMol ]
		BC3	[ RasMol ]	+environment [ RasMol ]
		BC4	[ RasMol ]	+environment [ RasMol ]
		BC5	[ RasMol ]	+environment [ RasMol ]
		BC6	[ RasMol ]	+environment [ RasMol ]
		BC7	[ RasMol ]	+environment [ RasMol ]
		BC8	[ RasMol ]	+environment [ RasMol ]
		BC9	[ RasMol ]	+environment [ RasMol ]
		CC1	[ RasMol ]	+environment [ RasMol ]
		CC2	[ RasMol ]	+environment [ RasMol ]
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		Pro A:203 - Lys A:204	[ RasMol ]
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	4caf
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4cae	PLASMODIUM VIVAX N-MYRISTOYLTRANSFERASE IN COMPLEX WITH A BENZOTHIOPHENE INHIBITOR (COMPOUND 20B)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (7, 21)

Sites (21, 21)

SS Bonds (0, 0)

Cis Peptide Bonds (3, 3)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 3)

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Pfam Domains (0, 0)

Gene Ontology (4, 4)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File