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(-) Description

Title :  CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS ZINC METALLOPROTEASE ZMP1 IN COMPLEX WITH INHIBITOR
 
Authors :  D. M. Ferraris, D. Sbardella, A. Petrera, S. Marini, B. Amstutz, M. Cole P. Sander, M. Rizzi
Date :  19 Jul 11  (Deposition) - 03 Aug 11  (Release) - 21 Sep 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.60
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Hydrolase-Inhibitor Complex, Pathogenicity, Phagosome Maturation (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. M. Ferraris, D. Sbardella, A. Petrera, S. Marini, B. Amstutz, M. Coletta, P. Sander, M. Rizzi
Crystal Structure Of Mycobacterium Tuberculosis Zinc-Dependent Metalloprotease-1 (Zmp1), A Metalloprotease Involved In Pathogenicity.
J. Biol. Chem. V. 286 32475 2011
PubMed-ID: 21813647  |  Reference-DOI: 10.1074/JBC.M111.271809

(-) Compounds

Molecule 1 - ENDOPEPTIDASE, PEPTIDASE FAMILY M13
    Chains: A, B
    EC Number: 3.4.24.-
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET100D/TOPO
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Organism Scientific: MYCOBACTERIUM TUBERCULOSIS
    Organism Taxid: 83332
    Strain: H37RV
    Synonym: PROBABLE ZINC METALLOPROTEASE, ZMP1 METALLOPROTEASE

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (10, 70)

Asymmetric Unit (10, 70)
No.NameCountTypeFull Name
12111Ligand/Ion2,2',2''-NITRILOTRIETHANOL
2ACT13Ligand/IonACETATE ION
3CA1Ligand/IonCALCIUM ION
4CL3Ligand/IonCHLORIDE ION
5PEG30Ligand/IonDI(HYDROXYETHYL)ETHER
6PG44Ligand/IonTETRAETHYLENE GLYCOL
7PGE8Ligand/IonTRIETHYLENE GLYCOL
8RDF2Ligand/IonN-ALPHA-L-RHAMNOPYRANOSYLOXY(HYDROXYPHOSPHINYL)-L-LEUCYL-L-TRYPTOPHAN
9SO46Ligand/IonSULFATE ION
10ZN2Ligand/IonZINC ION
Biological Unit 1 (7, 30)
No.NameCountTypeFull Name
12111Ligand/Ion2,2',2''-NITRILOTRIETHANOL
2ACT5Ligand/IonACETATE ION
3CA-1Ligand/IonCALCIUM ION
4CL-1Ligand/IonCHLORIDE ION
5PEG15Ligand/IonDI(HYDROXYETHYL)ETHER
6PG41Ligand/IonTETRAETHYLENE GLYCOL
7PGE5Ligand/IonTRIETHYLENE GLYCOL
8RDF1Ligand/IonN-ALPHA-L-RHAMNOPYRANOSYLOXY(HYDROXYPHOSPHINYL)-L-LEUCYL-L-TRYPTOPHAN
9SO42Ligand/IonSULFATE ION
10ZN-1Ligand/IonZINC ION
Biological Unit 2 (6, 34)
No.NameCountTypeFull Name
1211-1Ligand/Ion2,2',2''-NITRILOTRIETHANOL
2ACT8Ligand/IonACETATE ION
3CA-1Ligand/IonCALCIUM ION
4CL-1Ligand/IonCHLORIDE ION
5PEG15Ligand/IonDI(HYDROXYETHYL)ETHER
6PG43Ligand/IonTETRAETHYLENE GLYCOL
7PGE3Ligand/IonTRIETHYLENE GLYCOL
8RDF1Ligand/IonN-ALPHA-L-RHAMNOPYRANOSYLOXY(HYDROXYPHOSPHINYL)-L-LEUCYL-L-TRYPTOPHAN
9SO44Ligand/IonSULFATE ION
10ZN-1Ligand/IonZINC ION

(-) Sites  (69, 69)

Asymmetric Unit (69, 69)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHIS A:493 , HIS A:497 , GLU A:560 , RDF A:1665BINDING SITE FOR RESIDUE ZN A1664
02AC2SOFTWAREHIS B:493 , HIS B:497 , GLU B:560 , RDF B:1665BINDING SITE FOR RESIDUE ZN B1664
03AC3SOFTWAREPHE B:48 , ASN B:452 , ALA B:453 , TYR B:454 , ILE B:468 , HIS B:493 , GLU B:494 , HIS B:497 , GLU B:560 , HIS B:622 , ARG B:628 , ZN B:1664 , ACT B:1691 , HOH B:2071 , HOH B:2171BINDING SITE FOR RESIDUE RDF B1665
04AC4SOFTWAREPHE A:48 , VAL A:451 , ASN A:452 , ALA A:453 , TYR A:454 , HIS A:493 , GLU A:494 , HIS A:497 , GLU A:560 , ARG A:616 , HIS A:622 , ARG A:628 , ZN A:1664 , 211 A:1666 , PGE A:1684 , ACT A:1689 , HOH A:2148BINDING SITE FOR RESIDUE RDF A1665
05AC5SOFTWAREARG A:615 , ARG A:616 , ASP A:620 , RDF A:1665BINDING SITE FOR RESIDUE 211 A1666
06AC6SOFTWAREARG B:126 , THR B:248 , ALA B:249BINDING SITE FOR RESIDUE PEG B1666
07AC7SOFTWAREPRO A:6 , SER A:7 , GLY A:8 , ASP A:10BINDING SITE FOR RESIDUE PEG A1667
08AC8SOFTWAREGLN B:153 , SER B:154 , GLY B:155 , ILE B:156 , ARG B:219 , HOH B:2051BINDING SITE FOR RESIDUE PEG B1667
09AC9SOFTWAREPHE A:52 , VAL A:329 , GLU A:333 , GLN A:449BINDING SITE FOR RESIDUE PEG A1668
10BC1SOFTWARESER B:162 , ASP B:166 , HIS B:169 , ILE B:614 , LEU B:617 , ALA B:618 , HOH B:2140BINDING SITE FOR RESIDUE PEG B1668
11BC2SOFTWARESER A:86 , PRO A:100 , TRP A:298 , ASP A:414 , ASP A:415 , LEU A:416 , TYR A:417BINDING SITE FOR RESIDUE PEG A1669
12BC3SOFTWAREALA A:77 , HOH A:2019BINDING SITE FOR RESIDUE PEG A1670
13BC4SOFTWAREASN A:227 , LEU A:228 , ARG A:229BINDING SITE FOR RESIDUE PEG A1671
14BC5SOFTWAREGLN A:641 , ASP A:644 , VAL A:645 , PGE A:1683 , GLN B:576 , LEU B:577 , ASN B:580 , GLY B:581BINDING SITE FOR RESIDUE PEG A1672
15BC6SOFTWAREGLN B:576 , ALA B:638BINDING SITE FOR RESIDUE PEG B1669
16BC7SOFTWAREGLN A:534 , ARG A:634 , ARG A:657 , PEG A:1679 , ASP B:545 , PRO B:547 , GLY B:548BINDING SITE FOR RESIDUE PEG B1670
17BC8SOFTWARETHR B:123 , ARG B:126 , ALA B:127 , ALA B:425BINDING SITE FOR RESIDUE PEG B1671
18BC9SOFTWAREASP B:15BINDING SITE FOR RESIDUE PEG B1672
19CC1SOFTWAREASP A:479 , GLU A:480 , HOH A:2117 , HOH A:2139 , ILE B:5 , ASP B:479BINDING SITE FOR RESIDUE PEG A1673
20CC2SOFTWAREASP B:138 , THR B:139 , SER B:141 , ASN B:456 , PRO B:457 , GLY B:458 , TYR B:506BINDING SITE FOR RESIDUE PEG B1673
21CC3SOFTWAREARG A:126BINDING SITE FOR RESIDUE PEG A1674
22CC4SOFTWARELYS B:354 , ASP B:358 , ALA B:395 , LYS B:396 , VAL B:397 , TYR B:399 , ILE B:401 , TRP B:444BINDING SITE FOR RESIDUE PEG B1674
23CC5SOFTWARETHR A:152 , ARG A:219 , ARG A:263BINDING SITE FOR RESIDUE PEG A1675
24CC6SOFTWAREALA A:613 , ARG A:616 , LEU A:617 , ASP A:620 , HIS A:622 , SER A:623 , PRO A:624 , PRO A:625 , HOH A:2147BINDING SITE FOR RESIDUE PEG A1676
25CC7SOFTWAREASP A:358 , ASP A:362 , ALA A:395BINDING SITE FOR RESIDUE PEG A1677
26CC8SOFTWAREASP A:17 , ALA A:18 , ARG A:19 , ASP A:22 , ASP A:23 , PEG A:1680 , ACT A:1688BINDING SITE FOR RESIDUE PEG A1678
27CC9SOFTWAREASN A:582 , ALA B:4 , SER B:7 , ASP B:588BINDING SITE FOR RESIDUE PEG B1675
28DC1SOFTWAREVAL A:544 , ASP A:545 , ASP B:22 , ARG B:541 , GLU B:626 , PHE B:627 , ASN B:630 , LEU B:651BINDING SITE FOR RESIDUE PEG B1676
29DC2SOFTWAREGLU A:533 , GLN A:534 , ARG A:657 , PEG B:1670BINDING SITE FOR RESIDUE PEG A1679
30DC3SOFTWAREVAL B:216 , ARG B:220 , ACT B:1694 , SO4 B:1697BINDING SITE FOR RESIDUE PEG B1677
31DC4SOFTWARELYS B:392 , ASP B:507 , GLY B:508 , VAL B:513 , HOH B:2105BINDING SITE FOR RESIDUE PEG B1678
32DC5SOFTWAREASP A:22 , PEG A:1678 , ASP B:545BINDING SITE FOR RESIDUE PEG A1680
33DC6SOFTWAREGLU A:116 , ASN B:227 , ARG B:229BINDING SITE FOR RESIDUE PEG B1679
34DC7SOFTWAREASN A:363 , ALA A:574 , LEU A:577 , ASN A:580BINDING SITE FOR RESIDUE PEG A1681
35DC8SOFTWAREPHE B:349 , ALA B:353 , LYS B:354BINDING SITE FOR RESIDUE PEG B1680
36DC9SOFTWAREASN A:580 , HIS B:27 , GLY B:589 , GLN B:594 , PG4 B:1685BINDING SITE FOR RESIDUE PGE B1681
37EC1SOFTWAREGLU A:374 , LEU A:573 , ASP B:637 , ARG B:658 , HOH B:2161 , HOH B:2163BINDING SITE FOR RESIDUE PGE A1682
38EC2SOFTWAREASP B:221 , ASP B:501 , LYS B:505 , ASP B:514 , TRP B:516BINDING SITE FOR RESIDUE PGE B1682
39EC3SOFTWAREASP A:637 , GLN A:641 , ARG A:658 , PEG A:1672BINDING SITE FOR RESIDUE PGE A1683
40EC4SOFTWARETYR A:454 , TYR A:455 , HIS A:497 , RDF A:1665BINDING SITE FOR RESIDUE PGE A1684
41EC5SOFTWARELEU A:579 , ALA A:584 , HOH A:2144 , LEU B:579 , ALA B:584 , ACT B:1687 , HOH B:2150BINDING SITE FOR RESIDUE PGE B1683
42EC6SOFTWAREGLN A:319 , LYS A:607 , ARG A:609 , ASP B:648BINDING SITE FOR RESIDUE PGE A1685
43EC7SOFTWAREALA A:16 , HIS A:27 , ASP A:588 , GLY A:589 , GLN A:594 , HOH A:2006BINDING SITE FOR RESIDUE PGE A1686
44EC8SOFTWAREPRO B:540 , ASP B:542 , GLN B:553 , THR B:557 , ALA B:613 , ARG B:616 , LEU B:617 , ASP B:620 , HIS B:622 , PRO B:624 , GLU B:626 , HOH B:2153BINDING SITE FOR RESIDUE PG4 B1684
45EC9SOFTWAREHIS A:13 , TRP A:32 , GLU A:35 , HIS A:36 , ASP A:45 , SER A:50BINDING SITE FOR RESIDUE PG4 A1687
46FC1SOFTWARELEU B:11 , ALA B:16 , ARG B:19 , HIS B:27 , PGE B:1681 , HOH B:2010 , HOH B:2149BINDING SITE FOR RESIDUE PG4 B1685
47FC2SOFTWAREVAL A:544 , ASP A:545 , HIS A:546 , HOH A:2133 , GLN B:534 , TYR B:538 , ARG B:634 , ARG B:657BINDING SITE FOR RESIDUE PG4 B1686
48FC3SOFTWAREGLY A:581 , THR B:591 , MET B:593 , PGE B:1683 , HOH B:2150 , HOH B:2173BINDING SITE FOR RESIDUE ACT B1687
49FC4SOFTWAREASP A:15 , GLY A:30 , ARG A:541 , PEG A:1678BINDING SITE FOR RESIDUE ACT A1688
50FC5SOFTWARETYR B:147 , ALA B:256 , MET B:257 , THR B:258BINDING SITE FOR RESIDUE ACT B1688
51FC6SOFTWAREPHE A:445 , RDF A:1665BINDING SITE FOR RESIDUE ACT A1689
52FC7SOFTWAREASP B:15 , GLY B:30BINDING SITE FOR RESIDUE ACT B1689
53FC8SOFTWAREASP B:10BINDING SITE FOR RESIDUE ACT B1690
54FC9SOFTWARETYR B:455 , HIS B:497 , RDF B:1665 , ACT B:1694BINDING SITE FOR RESIDUE ACT B1691
55GC1SOFTWAREGLN B:125 , GLY B:134 , VAL B:135BINDING SITE FOR RESIDUE ACT B1692
56GC2SOFTWAREACT A:1691 , ASP B:479 , TYR B:575 , LEU B:579 , PRO B:585BINDING SITE FOR RESIDUE ACT B1693
57GC3SOFTWARETRP A:516 , ARG A:521BINDING SITE FOR RESIDUE ACT A1690
58GC4SOFTWAREILE A:5 , ASN B:582 , ACT B:1693BINDING SITE FOR RESIDUE ACT A1691
59GC5SOFTWAREHIS B:497 , PEG B:1677 , ACT B:1691 , HOH B:2073BINDING SITE FOR RESIDUE ACT B1694
60GC6SOFTWAREGLN A:125 , VAL A:129 , VAL A:135BINDING SITE FOR RESIDUE ACT A1692
61GC7SOFTWARELEU A:577 , ASN A:580 , ASP B:644 , VAL B:645 , HOH B:2163BINDING SITE FOR RESIDUE SO4 B1695
62GC8SOFTWAREHIS A:536 , HIS A:551 , VAL A:552 , GLN A:553 , GLY A:554 , ALA A:555 , HOH A:2159BINDING SITE FOR RESIDUE SO4 A1693
63GC9SOFTWAREILE B:532 , HIS B:536 , GLN B:553 , GLY B:554 , ALA B:555BINDING SITE FOR RESIDUE SO4 B1696
64HC1SOFTWARETHR B:152 , ARG B:219 , ARG B:263 , PEG B:1677 , HOH B:2045BINDING SITE FOR RESIDUE SO4 B1697
65HC2SOFTWAREARG A:42 , ALA A:43 , ARG A:49 , HOH A:2086BINDING SITE FOR RESIDUE SO4 A1694
66HC3SOFTWAREARG B:42 , ALA B:43 , THR B:44 , ARG B:49BINDING SITE FOR RESIDUE SO4 B1698
67HC4SOFTWAREASP B:242 , ILE B:411BINDING SITE FOR RESIDUE CL B1699
68HC5SOFTWARETYR A:147 , LEU A:435BINDING SITE FOR RESIDUE CL A1695
69HC6SOFTWAREASP B:113 , GLU B:116 , ASP B:412 , ASP B:414BINDING SITE FOR RESIDUE CA B1700

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3ZUK)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Pro A:471 -Pro A:472
2Gly A:548 -Pro A:549
3Pro B:471 -Pro B:472
4Gly B:548 -Pro B:549

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3ZUK)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3ZUK)

(-) Exons   (0, 0)

(no "Exon" information available for 3ZUK)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:657
 aligned with O53649_MYCTO | O53649 from UniProtKB/TrEMBL  Length:663

    Alignment length:660
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663
         O53649_MYCTO     4 AIPSGIDLSHIDADARPQDDLFGHVNGRWLAEHEIPADRATDGAFRSLFDRAETQVRDLIIQASQAGAAVGTDAQRIGDLYASFLDEEAVERAGVQPLHDELATIDSAADATELAAALGTLQRAGVGGGIGVYVDTDSKDSTRYLVHFTQSGIGLPDESYYRDEQHAAVLAAYPGHIARMFGLVYGGESRDHAKTADRIVALETKLADAHWDVVKRRDADLGYNLRTFAQLQTEGAGFDWVSWVTALGSAPDAMTELVVRQPDYLVTFASLWASVNVEDWKCWARWRLIRARAPWLTRALVAEDFEFYGRTLTGAQQLRDRWKRGVSLVENLMGDAVGKLYVQRHFPPDAKSRIDTLVDNLQEAYRISISELDWMTPQTRQRALAKLNKFTAKVGYPIKWRDYSKLAIDRDDLYGNVQRGYAVNHDRELAKLFGPVDRDEWFMTPQTVNAYYNPGMNEIVFPAAILQPPFFDPQADEAANYGGIGAVIGHEIGHGFDDQGAKYDGDGNLVDWWTDDDRTEFAARTKALIEQYHAYTPRDLVDHPGPPHVQGAFTIGENIGDLGGLSIALLAYQLSLNGNPAPVIDGLTGMQRVFFGWAQIWRTKSRAAEAIRRLAVDPHSPPEFRCNGVVRNVDAFYQAFDVTEDDALFLDPQRRVRIWN 663
               SCOP domains d3zuka_ A: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...................hhhhhhhhhhhhhh.......eeehhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.....eeeeeeee..eeeeeeeeeee......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh.hhhhhh.......eeehhhhhhhh...hhhhhhhhhh.......eeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhh.---.hhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh.eeeee................hhhhhhhhhhhhhhhhhhhhhhh................eee....eeeee.hhh.........hhhhhhhhhhhhhhhhhhhh...hhhh...........hhhhhhhhhhhhhhhhhhhhh..hhhhh............hhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhh.eeehhhhhhhhhhhh...hhhhhhhhhhh.hhhhhhhhh.........hhhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3zuk A   4 AIPSGIDLSHIDADARPQDDLFGHVNGRWLAEHEIPADRATDGAFRSLFDRAETQVRDLIIQASQAGAAVGTDAQRIGDLYASFLDEEAVERAGVQPLHDELATIDSAADATELAAALGTLQRAGVGGGIGVYVDTDSKDSTRYLVHFTQSGIGLPDESYYRDEQHAAVLAAYPGHIARMFGLVYGGESRDHAKTADRIVALETKLADAHWDVVKRRDADLGYNLRTFAQLQTEGAGFDWVSWVTALGSAPDAMTELVVRQPDYLVTFASLWASVNVEDWKCWARWRLIRARAPWLTRALVAEDFEFYGRTLTGAQQLRDRWKRGVSLVENLMGDAVGKLYVQRHF---AKSRIDTLVDNLQEAYRISISELDWMTPQTRQRALAKLNKFTAKVGYPIKWRDYSKLAIDRDDLYGNVQRGYAVNHDRELAKLFGPVDRDEWFMTPQTVNAYYNPGMNEIVFPAAILQPPFFDPQADEAANYGGIGAVIGHEIGHGFDDQGAKYDGDGNLVDWWTDDDRTEFAARTKALIEQYHAYTPRDLVDHPGPPHVQGAFTIGENIGDLGGLSIALLAYQLSLNGNPAPVIDGLTGMQRVFFGWAQIWRTKSRAAEAIRRLAVDPHSPPEFRCNGVVRNVDAFYQAFDVTEDDALFLDPQRRVRIWN 663
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343     | 353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663
                                                                                                                                                                                                                                                                                                                                                                                   349 353                                                                                                                                                                                                                                                                                                                      


Chain B from PDB  Type:PROTEIN  Length:657
 aligned with O53649_MYCTO | O53649 from UniProtKB/TrEMBL  Length:663

    Alignment length:660
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663
         O53649_MYCTO     4 AIPSGIDLSHIDADARPQDDLFGHVNGRWLAEHEIPADRATDGAFRSLFDRAETQVRDLIIQASQAGAAVGTDAQRIGDLYASFLDEEAVERAGVQPLHDELATIDSAADATELAAALGTLQRAGVGGGIGVYVDTDSKDSTRYLVHFTQSGIGLPDESYYRDEQHAAVLAAYPGHIARMFGLVYGGESRDHAKTADRIVALETKLADAHWDVVKRRDADLGYNLRTFAQLQTEGAGFDWVSWVTALGSAPDAMTELVVRQPDYLVTFASLWASVNVEDWKCWARWRLIRARAPWLTRALVAEDFEFYGRTLTGAQQLRDRWKRGVSLVENLMGDAVGKLYVQRHFPPDAKSRIDTLVDNLQEAYRISISELDWMTPQTRQRALAKLNKFTAKVGYPIKWRDYSKLAIDRDDLYGNVQRGYAVNHDRELAKLFGPVDRDEWFMTPQTVNAYYNPGMNEIVFPAAILQPPFFDPQADEAANYGGIGAVIGHEIGHGFDDQGAKYDGDGNLVDWWTDDDRTEFAARTKALIEQYHAYTPRDLVDHPGPPHVQGAFTIGENIGDLGGLSIALLAYQLSLNGNPAPVIDGLTGMQRVFFGWAQIWRTKSRAAEAIRRLAVDPHSPPEFRCNGVVRNVDAFYQAFDVTEDDALFLDPQRRVRIWN 663
               SCOP domains d3zukb_ B: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...................hhhhhhhhhhhhhh.......eeehhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.....eeeeeeee..eeeeeeeeeee......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh.hhhhhh.......eeehhhhhhhh...hhhhhhhhhh.hhhhh.eeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhh---hhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh..eeeee................hhhhhhhhhhhhhhhhhhhhhhh................eee....eeeee.hhh.........hhhhhhhhhhhhhhhhhhhhh..hhhh...........hhhhhhhhhhhhhhhhhhhhh..hhhhh............hhhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhh.eeehhhhhhhhhhhh...hhhhhhhhhhh.hhhhhhhhh.........hhhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3zuk B   4 AIPSGIDLSHIDADARPQDDLFGHVNGRWLAEHEIPADRATDGAFRSLFDRAETQVRDLIIQASQAGAAVGTDAQRIGDLYASFLDEEAVERAGVQPLHDELATIDSAADATELAAALGTLQRAGVGGGIGVYVDTDSKDSTRYLVHFTQSGIGLPDESYYRDEQHAAVLAAYPGHIARMFGLVYGGESRDHAKTADRIVALETKLADAHWDVVKRRDADLGYNLRTFAQLQTEGAGFDWVSWVTALGSAPDAMTELVVRQPDYLVTFASLWASVNVEDWKCWARWRLIRARAPWLTRALVAEDFEFYGRTLTGAQQLRDRWKRGVSLVENLMGDAVGKLYVQRHF---AKSRIDTLVDNLQEAYRISISELDWMTPQTRQRALAKLNKFTAKVGYPIKWRDYSKLAIDRDDLYGNVQRGYAVNHDRELAKLFGPVDRDEWFMTPQTVNAYYNPGMNEIVFPAAILQPPFFDPQADEAANYGGIGAVIGHEIGHGFDDQGAKYDGDGNLVDWWTDDDRTEFAARTKALIEQYHAYTPRDLVDHPGPPHVQGAFTIGENIGDLGGLSIALLAYQLSLNGNPAPVIDGLTGMQRVFFGWAQIWRTKSRAAEAIRRLAVDPHSPPEFRCNGVVRNVDAFYQAFDVTEDDALFLDPQRRVRIWN 663
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343     | 353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663
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 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3ZUK)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3ZUK)

(-) Gene Ontology  (6, 6)

Asymmetric Unit(hide GO term definitions)
Chain A,B   (O53649_MYCTO | O53649)
molecular function
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0004222    metalloendopeptidase activity    Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
    GO:0008237    metallopeptidase activity    Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
biological process
    GO:0006508    proteolysis    The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
cellular component
    GO:0005618    cell wall    The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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  3zuk
    Family and Domain Information: ProDom | SYSTERS
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  O53649_MYCTO | O53649
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  3.4.24.-
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 Related Entries

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