3ZUK - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS ZINC METALLO ZMP1 IN COMPLEX WITH INHIBITOR
• Keywords: HYDROLASE-INHIBITOR COMPLEX, PATHOGENICITY, PHAGOSOME MATURA
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3ZUK	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	ENDOPEPTIDASE, PEPTIDASE FAMILY M13	A	657	5187	0
2	Protein	ENDOPEPTIDASE, PEPTIDASE FAMILY M13	B	657	5187	0
3	Ligand	ENDOPEPTIDASE, PEPTIDASE FAMILY M13	A	32	0	247
4	Ligand	ENDOPEPTIDASE, PEPTIDASE FAMILY M13	B	38	0	267
5	Water			332	0	332
total				1716	10374	846

Proteins

Unit 1

ALA 4 ILE 5 PRO 6 SER 7 GLY 8 ILE 9 ASP 10 LEU 11 SER 12 HIS 13 ILE 14 ASP 15 ALA 16 ASP 17 ALA 18 ARG 19 PRO 20 GLN 21 ASP 22 ASP 23 LEU 24 PHE 25 GLY 26 HIS 27 VAL 28 ASN 29 GLY 30 ARG 31 TRP 32 LEU 33 ALA 34 GLU 35 HIS 36 GLU 37 ILE 38 PRO 39 ALA 40 ASP 41 ARG 42 ALA 43 THR 44 ASP 45 GLY 46 ALA 47 PHE 48 ARG 49 SER 50 LEU 51 PHE 52 ASP 53 ARG 54 ALA 55 GLU 56 THR 57 GLN 58 VAL 59 ARG 60 ASP 61 LEU 62 ILE 63 ILE 64 GLN 65 ALA 66 SER 67 GLN 68 ALA 69 GLY 70 ALA 71 ALA 72 VAL 73 GLY 74 THR 75 ASP 76 ALA 77 GLN 78 ARG 79 ILE 80 GLY 81 ASP 82 LEU 83 TYR 84 ALA 85 SER 86 PHE 87 LEU 88 ASP 89 GLU 90 GLU 91 ALA 92 VAL 93 GLU 94 ARG 95 ALA 96 GLY 97 VAL 98 GLN 99 PRO 100 LEU 101 HIS 102 ASP 103 GLU 104 LEU 105 ALA 106 THR 107 ILE 108 ASP 109 SER 110 ALA 111 ALA 112 ASP 113 ALA 114 THR 115 GLU 116 LEU 117 ALA 118 ALA 119 ALA 120 LEU 121 GLY 122 THR 123 LEU 124 GLN 125 ARG 126 ALA 127 GLY 128 VAL 129 GLY 130 GLY 131 GLY 132 ILE 133 GLY 134 VAL 135 TYR 136 VAL 137 ASP 138 THR 139 ASP 140 SER 141 LYS 142 ASP 143 SER 144 THR 145 ARG 146 TYR 147 LEU 148 VAL 149 HIS 150 PHE 151 THR 152 GLN 153 SER 154 GLY 155 ILE 156 GLY 157 LEU 158 PRO 159 ASP 160 GLU 161 SER 162 TYR 163 TYR 164 ARG 165 ASP 166 GLU 167 GLN 168 HIS 169 ALA 170 ALA 171 VAL 172 LEU 173 ALA 174 ALA 175 TYR 176 PRO 177 GLY 178 HIS 179 ILE 180 ALA 181 ARG 182 MET 183 PHE 184 GLY 185 LEU 186 VAL 187 TYR 188 GLY 189 GLY 190 GLU 191 SER 192 ARG 193 ASP 194 HIS 195 ALA 196 LYS 197 THR 198 ALA 199 ASP 200 ARG 201 ILE 202 VAL 203 ALA 204 LEU 205 GLU 206 THR 207 LYS 208 LEU 209 ALA 210 ASP 211 ALA 212 HIS 213 TRP 214 ASP 215 VAL 216 VAL 217 LYS 218 ARG 219 ARG 220 ASP 221 ALA 222 ASP 223 LEU 224 GLY 225 TYR 226 ASN 227 LEU 228 ARG 229 THR 230 PHE 231 ALA 232 GLN 233 LEU 234 GLN 235 THR 236 GLU 237 GLY 238 ALA 239 GLY 240 PHE 241 ASP 242 TRP 243 VAL 244 SER 245 TRP 246 VAL 247 THR 248 ALA 249 LEU 250 GLY 251 SER 252 ALA 253 PRO 254 ASP 255 ALA 256 MET 257 THR 258 GLU 259 LEU 260 VAL 261 VAL 262 ARG 263 GLN 264 PRO 265 ASP 266 TYR 267 LEU 268 VAL 269 THR 270 PHE 271 ALA 272 SER 273 LEU 274 TRP 275 ALA 276 SER 277 VAL 278 ASN 279 VAL 280 GLU 281 ASP 282 TRP 283 LYS 284 CYS 285 TRP 286 ALA 287 ARG 288 TRP 289 ARG 290 LEU 291 ILE 292 ARG 293 ALA 294 ARG 295 ALA 296 PRO 297 TRP 298 LEU 299 THR 300 ARG 301 ALA 302 LEU 303 VAL 304 ALA 305 GLU 306 ASP 307 PHE 308 GLU 309 PHE 310 TYR 311 GLY 312 ARG 313 THR 314 LEU 315 THR 316 GLY 317 ALA 318 GLN 319 GLN 320 LEU 321 ARG 322 ASP 323 ARG 324 TRP 325 LYS 326 ARG 327 GLY 328 VAL 329 SER 330 LEU 331 VAL 332 GLU 333 ASN 334 LEU 335 MET 336 GLY 337 ASP 338 ALA 339 VAL 340 GLY 341 LYS 342 LEU 343 TYR 344 VAL 345 GLN 346 ARG 347 HIS 348 PHE 349 ALA 353 LYS 354 SER 355 ARG 356 ILE 357 ASP 358 THR 359 LEU 360 VAL 361 ASP 362 ASN 363 LEU 364 GLN 365 GLU 366 ALA 367 TYR 368 ARG 369 ILE 370 SER 371 ILE 372 SER 373 GLU 374 LEU 375 ASP 376 TRP 377 MET 378 THR 379 PRO 380 GLN 381 THR 382 ARG 383 GLN 384 ARG 385 ALA 386 LEU 387 ALA 388 LYS 389 LEU 390 ASN 391 LYS 392 PHE 393 THR 394 ALA 395 LYS 396 VAL 397 GLY 398 TYR 399 PRO 400 ILE 401 LYS 402 TRP 403 ARG 404 ASP 405 TYR 406 SER 407 LYS 408 LEU 409 ALA 410 ILE 411 ASP 412 ARG 413 ASP 414 ASP 415 LEU 416 TYR 417 GLY 418 ASN 419 VAL 420 GLN 421 ARG 422 GLY 423 TYR 424 ALA 425 VAL 426 ASN 427 HIS 428 ASP 429 ARG 430 GLU 431 LEU 432 ALA 433 LYS 434 LEU 435 PHE 436 GLY 437 PRO 438 VAL 439 ASP 440 ARG 441 ASP 442 GLU 443 TRP 444 PHE 445 MET 446 THR 447 PRO 448 GLN 449 THR 450 VAL 451 ASN 452 ALA 453 TYR 454 TYR 455 ASN 456 PRO 457 GLY 458 MET 459 ASN 460 GLU 461 ILE 462 VAL 463 PHE 464 PRO 465 ALA 466 ALA 467 ILE 468 LEU 469 GLN 470 PRO 471 PRO 472 PHE 473 PHE 474 ASP 475 PRO 476 GLN 477 ALA 478 ASP 479 GLU 480 ALA 481 ALA 482 ASN 483 TYR 484 GLY 485 GLY 486 ILE 487 GLY 488 ALA 489 VAL 490 ILE 491 GLY 492 HIS 493 GLU 494 ILE 495 GLY 496 HIS 497 GLY 498 PHE 499 ASP 500 ASP 501 GLN 502 GLY 503 ALA 504 LYS 505 TYR 506 ASP 507 GLY 508 ASP 509 GLY 510 ASN 511 LEU 512 VAL 513 ASP 514 TRP 515 TRP 516 THR 517 ASP 518 ASP 519 ASP 520 ARG 521 THR 522 GLU 523 PHE 524 ALA 525 ALA 526 ARG 527 THR 528 LYS 529 ALA 530 LEU 531 ILE 532 GLU 533 GLN 534 TYR 535 HIS 536 ALA 537 TYR 538 THR 539 PRO 540 ARG 541 ASP 542 LEU 543 VAL 544 ASP 545 HIS 546 PRO 547 GLY 548 PRO 549 PRO 550 HIS 551 VAL 552 GLN 553 GLY 554 ALA 555 PHE 556 THR 557 ILE 558 GLY 559 GLU 560 ASN 561 ILE 562 GLY 563 ASP 564 LEU 565 GLY 566 GLY 567 LEU 568 SER 569 ILE 570 ALA 571 LEU 572 LEU 573 ALA 574 TYR 575 GLN 576 LEU 577 SER 578 LEU 579 ASN 580 GLY 581 ASN 582 PRO 583 ALA 584 PRO 585 VAL 586 ILE 587 ASP 588 GLY 589 LEU 590 THR 591 GLY 592 MET 593 GLN 594 ARG 595 VAL 596 PHE 597 PHE 598 GLY 599 TRP 600 ALA 601 GLN 602 ILE 603 TRP 604 ARG 605 THR 606 LYS 607 SER 608 ARG 609 ALA 610 ALA 611 GLU 612 ALA 613 ILE 614 ARG 615 ARG 616 LEU 617 ALA 618 VAL 619 ASP 620 PRO 621 HIS 622 SER 623 PRO 624 PRO 625 GLU 626 PHE 627 ARG 628 CYS 629 ASN 630 GLY 631 VAL 632 VAL 633 ARG 634 ASN 635 VAL 636 ASP 637 ALA 638 PHE 639 TYR 640 GLN 641 ALA 642 PHE 643 ASP 644 VAL 645 THR 646 GLU 647 ASP 648 ASP 649 ALA 650 LEU 651 PHE 652 LEU 653 ASP 654 PRO 655 GLN 656 ARG 657 ARG 658 VAL 659 ARG 660 ILE 661 TRP 662 ASN 663

Unit 2

ALA 4 ILE 5 PRO 6 SER 7 GLY 8 ILE 9 ASP 10 LEU 11 SER 12 HIS 13 ILE 14 ASP 15 ALA 16 ASP 17 ALA 18 ARG 19 PRO 20 GLN 21 ASP 22 ASP 23 LEU 24 PHE 25 GLY 26 HIS 27 VAL 28 ASN 29 GLY 30 ARG 31 TRP 32 LEU 33 ALA 34 GLU 35 HIS 36 GLU 37 ILE 38 PRO 39 ALA 40 ASP 41 ARG 42 ALA 43 THR 44 ASP 45 GLY 46 ALA 47 PHE 48 ARG 49 SER 50 LEU 51 PHE 52 ASP 53 ARG 54 ALA 55 GLU 56 THR 57 GLN 58 VAL 59 ARG 60 ASP 61 LEU 62 ILE 63 ILE 64 GLN 65 ALA 66 SER 67 GLN 68 ALA 69 GLY 70 ALA 71 ALA 72 VAL 73 GLY 74 THR 75 ASP 76 ALA 77 GLN 78 ARG 79 ILE 80 GLY 81 ASP 82 LEU 83 TYR 84 ALA 85 SER 86 PHE 87 LEU 88 ASP 89 GLU 90 GLU 91 ALA 92 VAL 93 GLU 94 ARG 95 ALA 96 GLY 97 VAL 98 GLN 99 PRO 100 LEU 101 HIS 102 ASP 103 GLU 104 LEU 105 ALA 106 THR 107 ILE 108 ASP 109 SER 110 ALA 111 ALA 112 ASP 113 ALA 114 THR 115 GLU 116 LEU 117 ALA 118 ALA 119 ALA 120 LEU 121 GLY 122 THR 123 LEU 124 GLN 125 ARG 126 ALA 127 GLY 128 VAL 129 GLY 130 GLY 131 GLY 132 ILE 133 GLY 134 VAL 135 TYR 136 VAL 137 ASP 138 THR 139 ASP 140 SER 141 LYS 142 ASP 143 SER 144 THR 145 ARG 146 TYR 147 LEU 148 VAL 149 HIS 150 PHE 151 THR 152 GLN 153 SER 154 GLY 155 ILE 156 GLY 157 LEU 158 PRO 159 ASP 160 GLU 161 SER 162 TYR 163 TYR 164 ARG 165 ASP 166 GLU 167 GLN 168 HIS 169 ALA 170 ALA 171 VAL 172 LEU 173 ALA 174 ALA 175 TYR 176 PRO 177 GLY 178 HIS 179 ILE 180 ALA 181 ARG 182 MET 183 PHE 184 GLY 185 LEU 186 VAL 187 TYR 188 GLY 189 GLY 190 GLU 191 SER 192 ARG 193 ASP 194 HIS 195 ALA 196 LYS 197 THR 198 ALA 199 ASP 200 ARG 201 ILE 202 VAL 203 ALA 204 LEU 205 GLU 206 THR 207 LYS 208 LEU 209 ALA 210 ASP 211 ALA 212 HIS 213 TRP 214 ASP 215 VAL 216 VAL 217 LYS 218 ARG 219 ARG 220 ASP 221 ALA 222 ASP 223 LEU 224 GLY 225 TYR 226 ASN 227 LEU 228 ARG 229 THR 230 PHE 231 ALA 232 GLN 233 LEU 234 GLN 235 THR 236 GLU 237 GLY 238 ALA 239 GLY 240 PHE 241 ASP 242 TRP 243 VAL 244 SER 245 TRP 246 VAL 247 THR 248 ALA 249 LEU 250 GLY 251 SER 252 ALA 253 PRO 254 ASP 255 ALA 256 MET 257 THR 258 GLU 259 LEU 260 VAL 261 VAL 262 ARG 263 GLN 264 PRO 265 ASP 266 TYR 267 LEU 268 VAL 269 THR 270 PHE 271 ALA 272 SER 273 LEU 274 TRP 275 ALA 276 SER 277 VAL 278 ASN 279 VAL 280 GLU 281 ASP 282 TRP 283 LYS 284 CYS 285 TRP 286 ALA 287 ARG 288 TRP 289 ARG 290 LEU 291 ILE 292 ARG 293 ALA 294 ARG 295 ALA 296 PRO 297 TRP 298 LEU 299 THR 300 ARG 301 ALA 302 LEU 303 VAL 304 ALA 305 GLU 306 ASP 307 PHE 308 GLU 309 PHE 310 TYR 311 GLY 312 ARG 313 THR 314 LEU 315 THR 316 GLY 317 ALA 318 GLN 319 GLN 320 LEU 321 ARG 322 ASP 323 ARG 324 TRP 325 LYS 326 ARG 327 GLY 328 VAL 329 SER 330 LEU 331 VAL 332 GLU 333 ASN 334 LEU 335 MET 336 GLY 337 ASP 338 ALA 339 VAL 340 GLY 341 LYS 342 LEU 343 TYR 344 VAL 345 GLN 346 ARG 347 HIS 348 PHE 349 ALA 353 LYS 354 SER 355 ARG 356 ILE 357 ASP 358 THR 359 LEU 360 VAL 361 ASP 362 ASN 363 LEU 364 GLN 365 GLU 366 ALA 367 TYR 368 ARG 369 ILE 370 SER 371 ILE 372 SER 373 GLU 374 LEU 375 ASP 376 TRP 377 MET 378 THR 379 PRO 380 GLN 381 THR 382 ARG 383 GLN 384 ARG 385 ALA 386 LEU 387 ALA 388 LYS 389 LEU 390 ASN 391 LYS 392 PHE 393 THR 394 ALA 395 LYS 396 VAL 397 GLY 398 TYR 399 PRO 400 ILE 401 LYS 402 TRP 403 ARG 404 ASP 405 TYR 406 SER 407 LYS 408 LEU 409 ALA 410 ILE 411 ASP 412 ARG 413 ASP 414 ASP 415 LEU 416 TYR 417 GLY 418 ASN 419 VAL 420 GLN 421 ARG 422 GLY 423 TYR 424 ALA 425 VAL 426 ASN 427 HIS 428 ASP 429 ARG 430 GLU 431 LEU 432 ALA 433 LYS 434 LEU 435 PHE 436 GLY 437 PRO 438 VAL 439 ASP 440 ARG 441 ASP 442 GLU 443 TRP 444 PHE 445 MET 446 THR 447 PRO 448 GLN 449 THR 450 VAL 451 ASN 452 ALA 453 TYR 454 TYR 455 ASN 456 PRO 457 GLY 458 MET 459 ASN 460 GLU 461 ILE 462 VAL 463 PHE 464 PRO 465 ALA 466 ALA 467 ILE 468 LEU 469 GLN 470 PRO 471 PRO 472 PHE 473 PHE 474 ASP 475 PRO 476 GLN 477 ALA 478 ASP 479 GLU 480 ALA 481 ALA 482 ASN 483 TYR 484 GLY 485 GLY 486 ILE 487 GLY 488 ALA 489 VAL 490 ILE 491 GLY 492 HIS 493 GLU 494 ILE 495 GLY 496 HIS 497 GLY 498 PHE 499 ASP 500 ASP 501 GLN 502 GLY 503 ALA 504 LYS 505 TYR 506 ASP 507 GLY 508 ASP 509 GLY 510 ASN 511 LEU 512 VAL 513 ASP 514 TRP 515 TRP 516 THR 517 ASP 518 ASP 519 ASP 520 ARG 521 THR 522 GLU 523 PHE 524 ALA 525 ALA 526 ARG 527 THR 528 LYS 529 ALA 530 LEU 531 ILE 532 GLU 533 GLN 534 TYR 535 HIS 536 ALA 537 TYR 538 THR 539 PRO 540 ARG 541 ASP 542 LEU 543 VAL 544 ASP 545 HIS 546 PRO 547 GLY 548 PRO 549 PRO 550 HIS 551 VAL 552 GLN 553 GLY 554 ALA 555 PHE 556 THR 557 ILE 558 GLY 559 GLU 560 ASN 561 ILE 562 GLY 563 ASP 564 LEU 565 GLY 566 GLY 567 LEU 568 SER 569 ILE 570 ALA 571 LEU 572 LEU 573 ALA 574 TYR 575 GLN 576 LEU 577 SER 578 LEU 579 ASN 580 GLY 581 ASN 582 PRO 583 ALA 584 PRO 585 VAL 586 ILE 587 ASP 588 GLY 589 LEU 590 THR 591 GLY 592 MET 593 GLN 594 ARG 595 VAL 596 PHE 597 PHE 598 GLY 599 TRP 600 ALA 601 GLN 602 ILE 603 TRP 604 ARG 605 THR 606 LYS 607 SER 608 ARG 609 ALA 610 ALA 611 GLU 612 ALA 613 ILE 614 ARG 615 ARG 616 LEU 617 ALA 618 VAL 619 ASP 620 PRO 621 HIS 622 SER 623 PRO 624 PRO 625 GLU 626 PHE 627 ARG 628 CYS 629 ASN 630 GLY 631 VAL 632 VAL 633 ARG 634 ASN 635 VAL 636 ASP 637 ALA 638 PHE 639 TYR 640 GLN 641 ALA 642 PHE 643 ASP 644 VAL 645 THR 646 GLU 647 ASP 648 ASP 649 ALA 650 LEU 651 PHE 652 LEU 653 ASP 654 PRO 655 GLN 656 ARG 657 ARG 658 VAL 659 ARG 660 ILE 661 TRP 662 ASN 663

Ligands

Unit 3	ZN 1664 RDF 1665 211 1666 PEG 1667 PEG 1668 PEG 1669 PEG 1670 PEG 1671 PEG 1672 PEG 1673 PEG 1674 PEG 1675 PEG 1676 PEG 1677 PEG 1678 PEG 1679 PEG 1680 PEG 1681 PGE 1682 PGE 1683 PGE 1684 PGE 1685 PGE 1686 PG4 1687 ACT 1688 ACT 1689 ACT 1690 ACT 1691 ACT 1692 SO4 1693 SO4 1694 CL 1695
Unit 4	ZN 1664 RDF 1665 PEG 1666 PEG 1667 PEG 1668 PEG 1669 PEG 1670 PEG 1671 PEG 1672 PEG 1673 PEG 1674 PEG 1675 PEG 1676 PEG 1677 PEG 1678 PEG 1679 PEG 1680 PGE 1681 PGE 1682 PGE 1683 PG4 1684 PG4 1685 PG4 1686 ACT 1687 ACT 1688 ACT 1689 ACT 1690 ACT 1691 ACT 1692 ACT 1693 ACT 1694 SO4 1695 SO4 1696 SO4 1697 SO4 1698 CL 1699 CA 1700 CL 1701