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(-) Description

Title :  ANOPHELES FUNESTUS GLUTATHIONE-S-TRANSFERASE EPSILON 2 (GSTE2) PROTEIN STRUCTURE FROM DIFFERENT ALELLES: A SINGLE AMINO ACID CHANGE CONFERS HIGH LEVEL OF DDT RESISTANCE AND CROSS RESISTANCE TO PERMETHRIN IN A MAJOR MALARIA VECTOR IN AFRICA
 
Authors :  C. Yunta, A. Albert
Date :  11 Feb 13  (Deposition) - 22 Jan 14  (Release) - 12 Mar 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.64
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. M. Riveron, C. Yunta, S. S. Ibrahim, R. Djouaka, H. Irving, B. D. Menze, H. M. Ismail, J. Hemingway, H. Ranson, A. Albert, C. S. Wondji
A Single Mutation In The Gste2 Gene Allows Tracking Of Metabolically-Based Insecticide Resistance In A Major Malaria Vector.
Genome Biol. V. 15 R27 2014
PubMed-ID: 24565444  |  Reference-DOI: 10.1186/GB-2014-15-2-R27

(-) Compounds

Molecule 1 - GLUTATHIONE S-TRANSFERASE E2
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Organism Scientific: ANOPHELES FUNESTUS
    Organism Taxid: 62324
    Synonym: GLUTATHIONE-S-TRANSFERASE EPSILON 2, GSTE2

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric/Biological Unit (1, 2)
No.NameCountTypeFull Name
1GSH2Ligand/IonGLUTATHIONE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:12 , PRO A:14 , LEU A:36 , HIS A:41 , HIS A:53 , THR A:54 , ILE A:55 , PRO A:56 , GLU A:67 , SER A:68 , HIS A:69 , PHE A:108 , ARG A:112 , HOH A:2102 , HOH A:2114 , HOH A:2187 , HOH A:2310 , HOH A:2311 , HOH A:2312 , HOH A:2313 , HOH A:2314BINDING SITE FOR RESIDUE GSH A1222
2AC2SOFTWAREHOH A:2174 , SER B:12 , PRO B:14 , LEU B:36 , HIS B:41 , HIS B:53 , THR B:54 , ILE B:55 , PRO B:56 , GLU B:67 , SER B:68 , HIS B:69 , PHE B:108 , ARG B:112 , HOH B:2082 , HOH B:2090 , HOH B:2146 , HOH B:2257 , HOH B:2258 , HOH B:2260 , HOH B:2261BINDING SITE FOR RESIDUE GSH B1222

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3ZML)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Ile A:55 -Pro A:56
2Ile B:55 -Pro B:56

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3ZML)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3ZML)

(-) Exons   (0, 0)

(no "Exon" information available for 3ZML)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:218
 aligned with G0XSZ1_ANOFN | G0XSZ1 from UniProtKB/TrEMBL  Length:221

    Alignment length:218
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213        
         G0XSZ1_ANOFN     4 LVLYTLHLSPPCRAVELTAKALGLELEQKNINLLAGDHLTPEFMKLNPQHTIPVLDDDGTIITESHAIMIYLVTKYGKDDTLYPKDPVQQARVNAALHFESGVLFARMRFIFERIFFYGKSDIPEDRVEYVQKSYRLLEDTLKDDFVAGSNMTIADFSCISTISSIMGVVPLEQSEHPRIYEWIDRLKQLPYYEEANGGGGTDLGKFVLAKKEENAKA 221
               SCOP domains d3zmla1 A:4-86 automated matches                                                   d3zmla2 A:87-221 automated matches                                                                                                      SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee...hhhhhhhhhhhhhh....eeee.hhhhhhhhhhhhhhhh......eeee..eeeehhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhh.........hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3zml A   4 LVLYTLHLSPPCRAVELTAKALGLELEQKNINLLAGDHLTPEFMKLNPQHTIPVLDDDGTIITESHAIMIYLVTKYGKDDTLYPKDPVQQARVNAALHFESGVLFARMRFIFERILFYGKSDIPEDRIEYVQKSYRLLEDTLKDDFVAGSKMTIADFSCISTISSIMGVVPLEQSEHPRIYEWIDRLKQLPYYEEANGGGGTDLGKFVLAKKEENAKA 221
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213        


Chain B from PDB  Type:PROTEIN  Length:219
 aligned with G0XSZ1_ANOFN | G0XSZ1 from UniProtKB/TrEMBL  Length:221

    Alignment length:219
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212         
         G0XSZ1_ANOFN     3 KLVLYTLHLSPPCRAVELTAKALGLELEQKNINLLAGDHLTPEFMKLNPQHTIPVLDDDGTIITESHAIMIYLVTKYGKDDTLYPKDPVQQARVNAALHFESGVLFARMRFIFERIFFYGKSDIPEDRVEYVQKSYRLLEDTLKDDFVAGSNMTIADFSCISTISSIMGVVPLEQSEHPRIYEWIDRLKQLPYYEEANGGGGTDLGKFVLAKKEENAKA 221
               SCOP domains d3zmlb1 B:3-86 automated matches                                                    d3zmlb2 B:87-221 automated matches                                                                                                      SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhhhhhhhhhh...eeee.....hhhhhhhhhhhh......eeee..eeeehhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhh.........hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3zml B   3 KLVLYTLHLSPPCRAVELTAKALGLELEQKNINLLAGDHLTPEFMKLNPQHTIPVLDDDGTIITESHAIMIYLVTKYGKDDTLYPKDPVQQARVNAALHFESGVLFARMRFIFERILFYGKSDIPEDRIEYVQKSYRLLEDTLKDDFVAGSKMTIADFSCISTISSIMGVVPLEQSEHPRIYEWIDRLKQLPYYEEANGGGGTDLGKFVLAKKEENAKA 221
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 4)

Asymmetric/Biological Unit
(-)
Class: All alpha proteins (14657)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3ZML)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3ZML)

(-) Gene Ontology  (1, 1)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B   (G0XSZ1_ANOFN | G0XSZ1)
molecular function
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        G0XSZ1_ANOFN | G0XSZ1: 3zmk

(-) Related Entries Specified in the PDB File

3zmk ANOPHELES FUNESTUS GLUTATHIONE-S-TRANSFERASE EPSILON 2 (GSTE2) PROTEIN STRUCTURE FROM DIFFERENT ALELLES: A SINGLE AMINO ACID CHANGE CONFERS HIGH LEVEL OF DDT RESISTANCE AND CROSS RESISTANCE TO PERMETHRIN IN A MAJOR MALARIA VECTOR IN AFRICA