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Title :   CRYSTAL STRUCTURE OF THE N-TERMINAL 1-37 RESIDUES DELETED MUTANT OF GEOBACILLUS COPPER NITRITE REDUCTASE

Authors :   Y. Fukuda, M. Nojiri

Date :   09 Sep 13 (Deposition) - 23 Jul 14 (Release) - 23 Jul 14 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.77

Chains :   Asym. Unit : A,B,C,D,E,F,G,H,I
Biol. Unit 1: A,B,C  (1x)
Biol. Unit 2: D,E,F  (1x)
Biol. Unit 3: G,H,I  (1x)

Keywords :   Cupredoxin-Fold, Trimer, Nitrite Reduction, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   Y. Fukuda, H. Koteishi, R. Yoneda, T. Tamada, H. Takami, T. Inoue, M. Nojiri
Structural And Functional Characterization Of The Geobacillus Copper Nitrite Reductase: Involvement Of The Unique N-Terminal Region In The Interprotein Electron Transfer With Its Redox Partner
Biochim. Biophys. Acta V. 1837 396 2014
PubMed-ID: 24440558 | Reference-DOI: 10.1016/J.BBABIO.2014.01.004

Compounds

Molecule 1 - NITRITE REDUCTASE
	Chains	:	A, B, C, D, E, F, G, H, I
	EC Number	:	1.7.2.1
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET-20B
	Expression System Strain	:	ROSETTA-GAMI (DE3)
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Fragment	:	UNP RESIDUES 69-354
	Gene	:	GK0767
	Mutation	:	YES
	Organism Scientific	:	GEOBACILLUS KAUSTOPHILUS
	Organism Taxid	:	235909
	Strain	:	HTA426

Structural Features

Chains, Units

		1	2	3	4	5	6	7	8	9
Asymmetric Unit	:	A	B	C	D	E	F	G	H	I
Biological Unit 1 (1x)	:	A	B	C
Biological Unit 2 (1x)	:				D	E	F
Biological Unit 3 (1x)	:							G	H	I

Summary Information (see also Sequences/Alignments below)

Ligands, Modified Residues, Ions (2, 36)

Asymmetric Unit (2, 36)

No.	Name	Count	Type	Full Name
1	CU	18	Ligand/Ion	COPPER (II) ION
2	FMT	18	Ligand/Ion	FORMIC ACID

Biological Unit 1 (1, 6)

No.	Name	Count	Type	Full Name
1	CU	-1	Ligand/Ion	COPPER (II) ION
2	FMT	6	Ligand/Ion	FORMIC ACID

Biological Unit 2 (1, 6)

No.	Name	Count	Type	Full Name
1	CU	-1	Ligand/Ion	COPPER (II) ION
2	FMT	6	Ligand/Ion	FORMIC ACID

Biological Unit 3 (1, 6)

No.	Name	Count	Type	Full Name
1	CU	-1	Ligand/Ion	COPPER (II) ION
2	FMT	6	Ligand/Ion	FORMIC ACID

Sites (36, 36)

Asymmetric Unit (36, 36)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	HIS A:95 , CYS A:135 , HIS A:143 , MET A:148	BINDING SITE FOR RESIDUE CU A 401
02	AC2	SOFTWARE	HIS A:100 , HIS A:134 , HIS B:294 , FMT B:401 , HOH B:671	BINDING SITE FOR RESIDUE CU A 402
03	AC3	SOFTWARE	ASP A:98 , GLY A:136 , HOH A:647 , VAL B:246 , FMT B:401	BINDING SITE FOR RESIDUE FMT A 403
04	AC4	SOFTWARE	HIS A:244 , VAL A:246 , HIS A:294 , PHE A:296 , HOH A:690 , ASP C:98 , HIS C:134 , CU C:403 , FMT C:404	BINDING SITE FOR RESIDUE FMT A 404
05	AC5	SOFTWARE	ASP A:98 , HIS A:134 , CU A:402 , FMT A:403 , VAL B:246 , HIS B:294 , PHE B:296 , HOH B:671	BINDING SITE FOR RESIDUE FMT B 401
06	AC6	SOFTWARE	HIS B:95 , CYS B:135 , HIS B:143 , MET B:148	BINDING SITE FOR RESIDUE CU B 402
07	AC7	SOFTWARE	HIS B:100 , HIS B:134 , HIS C:294 , FMT C:401 , HOH C:675	BINDING SITE FOR RESIDUE CU B 403
08	AC8	SOFTWARE	ASP B:98 , PHE B:110 , GLY B:136 , HOH B:627 , VAL C:246 , FMT C:401	BINDING SITE FOR RESIDUE FMT B 404
09	AC9	SOFTWARE	ASP B:98 , HIS B:134 , CU B:403 , FMT B:404 , VAL C:246 , HIS C:294 , PHE C:296 , HOH C:672 , HOH C:675	BINDING SITE FOR RESIDUE FMT C 401
10	BC1	SOFTWARE	HIS C:95 , CYS C:135 , HIS C:143 , MET C:148	BINDING SITE FOR RESIDUE CU C 402
11	BC2	SOFTWARE	HIS A:294 , FMT A:404 , HOH A:690 , HIS C:100 , HIS C:134	BINDING SITE FOR RESIDUE CU C 403
12	BC3	SOFTWARE	FMT A:404 , ASP C:98 , GLY C:136 , HOH C:648	BINDING SITE FOR RESIDUE FMT C 404
13	BC4	SOFTWARE	HIS D:95 , CYS D:135 , HIS D:143 , MET D:148	BINDING SITE FOR RESIDUE CU D 401
14	BC5	SOFTWARE	HIS D:100 , HIS D:134 , FMT D:404 , HOH D:663 , HIS E:294	BINDING SITE FOR RESIDUE CU D 402
15	BC6	SOFTWARE	ASP D:98 , GLY D:136 , FMT D:404 , HOH D:652	BINDING SITE FOR RESIDUE FMT D 403
16	BC7	SOFTWARE	ASP D:98 , HIS D:134 , CU D:402 , FMT D:403 , HOH D:663 , HIS E:244 , VAL E:246 , HIS E:294	BINDING SITE FOR RESIDUE FMT D 404
17	BC8	SOFTWARE	HIS D:244 , VAL D:246 , VAL D:292 , HIS D:294 , PHE D:296 , HOH D:664 , ASP F:98 , HIS F:134 , CU F:402 , FMT F:403	BINDING SITE FOR RESIDUE FMT D 405
18	BC9	SOFTWARE	HIS E:95 , CYS E:135 , HIS E:143 , MET E:148	BINDING SITE FOR RESIDUE CU E 401
19	CC1	SOFTWARE	HIS E:100 , HIS E:134 , FMT E:404 , HOH E:666 , HIS F:294	BINDING SITE FOR RESIDUE CU E 402
20	CC2	SOFTWARE	ASP E:98 , GLY E:136 , FMT E:404 , HOH E:649	BINDING SITE FOR RESIDUE FMT E 403
21	CC3	SOFTWARE	ASP E:98 , HIS E:134 , CU E:402 , FMT E:403 , HOH E:666 , VAL F:246 , HIS F:294 , PHE F:296	BINDING SITE FOR RESIDUE FMT E 404
22	CC4	SOFTWARE	HIS F:95 , CYS F:135 , HIS F:143 , MET F:148	BINDING SITE FOR RESIDUE CU F 401
23	CC5	SOFTWARE	HIS D:294 , FMT D:405 , HOH D:664 , HIS F:100 , HIS F:134	BINDING SITE FOR RESIDUE CU F 402
24	CC6	SOFTWARE	FMT D:405 , ASP F:98 , GLY F:136	BINDING SITE FOR RESIDUE FMT F 403
25	CC7	SOFTWARE	HIS G:95 , CYS G:135 , HIS G:143 , MET G:148	BINDING SITE FOR RESIDUE CU G 401
26	CC8	SOFTWARE	HIS G:100 , HIS G:134 , HOH G:665 , HIS H:294 , FMT H:401	BINDING SITE FOR RESIDUE CU G 402
27	CC9	SOFTWARE	ASP G:98 , PHE G:110 , GLY G:136 , HOH G:610 , VAL H:246 , FMT H:401	BINDING SITE FOR RESIDUE FMT G 403
28	DC1	SOFTWARE	VAL G:246 , HIS G:294 , PHE G:296 , HOH G:666 , ASP I:98 , HIS I:134 , CU I:403 , FMT I:404	BINDING SITE FOR RESIDUE FMT G 404
29	DC2	SOFTWARE	ASP G:98 , HIS G:134 , CU G:402 , FMT G:403 , HOH G:665 , VAL H:246 , VAL H:292 , HIS H:294 , PHE H:296	BINDING SITE FOR RESIDUE FMT H 401
30	DC3	SOFTWARE	HIS H:95 , CYS H:135 , HIS H:143 , MET H:148	BINDING SITE FOR RESIDUE CU H 402
31	DC4	SOFTWARE	HIS H:100 , HIS H:134 , HIS I:294 , FMT I:401 , HOH I:658	BINDING SITE FOR RESIDUE CU H 403
32	DC5	SOFTWARE	ASP H:98 , GLY H:136 , HOH H:594 , VAL I:246 , FMT I:401	BINDING SITE FOR RESIDUE FMT H 404
33	DC6	SOFTWARE	ASP H:98 , HIS H:134 , CU H:403 , FMT H:404 , VAL I:246 , HIS I:294 , PHE I:296 , HOH I:658	BINDING SITE FOR RESIDUE FMT I 401
34	DC7	SOFTWARE	HIS I:95 , CYS I:135 , HIS I:143 , MET I:148	BINDING SITE FOR RESIDUE CU I 402
35	DC8	SOFTWARE	HIS G:294 , FMT G:404 , HOH G:666 , HIS I:100 , HIS I:134	BINDING SITE FOR RESIDUE CU I 403
36	DC9	SOFTWARE	VAL G:246 , FMT G:404 , ASP I:98 , GLY I:136 , HOH I:635	BINDING SITE FOR RESIDUE FMT I 404

SS Bonds (0, 0)

Cis Peptide Bonds (27, 27)

Asymmetric Unit

No.	Residues
1	Ala A:69	-	Pro A:70
2	Lys A:138	-	Pro A:139
3	Gly A:236	-	Pro A:237
4	Ala B:69	-	Pro B:70
5	Lys B:138	-	Pro B:139
6	Gly B:236	-	Pro B:237
7	Ala C:69	-	Pro C:70
8	Lys C:138	-	Pro C:139
9	Gly C:236	-	Pro C:237
10	Ala D:69	-	Pro D:70
11	Lys D:138	-	Pro D:139
12	Gly D:236	-	Pro D:237
13	Ala E:69	-	Pro E:70
14	Lys E:138	-	Pro E:139
15	Gly E:236	-	Pro E:237
16	Ala F:69	-	Pro F:70
17	Lys F:138	-	Pro F:139
18	Gly F:236	-	Pro F:237
19	Ala G:69	-	Pro G:70
20	Lys G:138	-	Pro G:139
21	Gly G:236	-	Pro G:237
22	Ala H:69	-	Pro H:70
23	Lys H:138	-	Pro H:139
24	Gly H:236	-	Pro H:237
25	Ala I:69	-	Pro I:70
26	Lys I:138	-	Pro I:139
27	Gly I:236	-	Pro I:237

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:273
 aligned with Q5L1X8_GEOKA | Q5L1X8 from UniProtKB/TrEMBL  Length:354

    Alignment length:273
                                    79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339   
         Q5L1X8_GEOKA    70 HDVHIEMTAQITDIEIDKGKIYKAWTFNGQAPGPLVVVNEGDTIHFTLKNMDPVVPHSMDFHAVHASPSKDFIDVMPNKSGTFTYPANKPGVFMYHCGTKPVLQHIANGMHGVIIVKPKNGYPTDKEVDREYVLIQNEWYKYNDMNDFQNGVPSYVVFSSKALKPGDPNTNGDTFTLKEKPLLAKVGEKIRLYINNVGPNEVSSFHVVGTVFDDVYLDGNPNNHLQGMQTVMLPASGGAVVEFTVTRPGTYPIVTHQFNHAQKGAVAMLKVTE 342
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeeeee..eeeeeeee........eeee...eeeeeeee.........ee.....hhhhhh.......eeeeeee....eeeeee....hhhhhhhh..eeeeeee......hhhhh.eeeeeeeeee....hhhhhhhh...eeeeeee.............hhhhhh.eeee...eeeeeeeeee....eeeee....eeeeee......eeeee..eee....eeeeeee....eeeeeee.hhhhhhh..eeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3wia A  39 HDVHIEMTAQITDIEIDKGKIYKAWTFNGQAPGPLVVVNEGDTIHFTLKNMDPVVPHSMDFHAVHASPSKDFIDVMPNKSGTFTYPANKPGVFMYHCGTKPVLQHIANGMHGVIIVKPKNGYPTDKEVDREYVLIQNEWYKYNDMNDFQNGVPSYVVFSSKALKPGDPNTNGDTFTLKEKPLLAKVGEKIRLYINNVGPNEVSSFHVVGTVFDDVYLDGNPNNHLQGMQTVMLPASGGAVVEFTVTRPGTYPIVTHQFNHAQKGAVAMLKVTE 311
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308

Chain B from PDB  Type:PROTEIN  Length:273
 aligned with Q5L1X8_GEOKA | Q5L1X8 from UniProtKB/TrEMBL  Length:354

    Alignment length:273
                                    79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339   
         Q5L1X8_GEOKA    70 HDVHIEMTAQITDIEIDKGKIYKAWTFNGQAPGPLVVVNEGDTIHFTLKNMDPVVPHSMDFHAVHASPSKDFIDVMPNKSGTFTYPANKPGVFMYHCGTKPVLQHIANGMHGVIIVKPKNGYPTDKEVDREYVLIQNEWYKYNDMNDFQNGVPSYVVFSSKALKPGDPNTNGDTFTLKEKPLLAKVGEKIRLYINNVGPNEVSSFHVVGTVFDDVYLDGNPNNHLQGMQTVMLPASGGAVVEFTVTRPGTYPIVTHQFNHAQKGAVAMLKVTE 342
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeeeee..eeeeeeee........eeee..eeeeeeeee.........ee.....hhhhhh.......eeeeeeee...eeeeee....hhhhhhhh..eeeeeee......hhhhh.eeeeeeeeee....hhhhhhhh...eeeeeee.............hhhhhh.eeee...eeeeeeeeee....eeeee....eeeeee......eeeee..eee....eeeeeee....eeeeeee.hhhhhhh..eeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3wia B  39 HDVHIEMTAQITDIEIDKGKIYKAWTFNGQAPGPLVVVNEGDTIHFTLKNMDPVVPHSMDFHAVHASPSKDFIDVMPNKSGTFTYPANKPGVFMYHCGTKPVLQHIANGMHGVIIVKPKNGYPTDKEVDREYVLIQNEWYKYNDMNDFQNGVPSYVVFSSKALKPGDPNTNGDTFTLKEKPLLAKVGEKIRLYINNVGPNEVSSFHVVGTVFDDVYLDGNPNNHLQGMQTVMLPASGGAVVEFTVTRPGTYPIVTHQFNHAQKGAVAMLKVTE 311
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308

Chain C from PDB  Type:PROTEIN  Length:273
 aligned with Q5L1X8_GEOKA | Q5L1X8 from UniProtKB/TrEMBL  Length:354

    Alignment length:273
                                    79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339   
         Q5L1X8_GEOKA    70 HDVHIEMTAQITDIEIDKGKIYKAWTFNGQAPGPLVVVNEGDTIHFTLKNMDPVVPHSMDFHAVHASPSKDFIDVMPNKSGTFTYPANKPGVFMYHCGTKPVLQHIANGMHGVIIVKPKNGYPTDKEVDREYVLIQNEWYKYNDMNDFQNGVPSYVVFSSKALKPGDPNTNGDTFTLKEKPLLAKVGEKIRLYINNVGPNEVSSFHVVGTVFDDVYLDGNPNNHLQGMQTVMLPASGGAVVEFTVTRPGTYPIVTHQFNHAQKGAVAMLKVTE 342
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeeeee..eeeeeeee........eeee...eeeeeeee.........ee.....hhhhhh.......eeeeeee....eeeeee....hhhhhhhhh.eeeeeee......hhhhh.eeeeeeeeee....hhhhhhhh...eeeeeee.............hhhhhh.eeee...eeeeeeeeee....eeeee....eeeeee......eeeee..eee....eeeeeee....eeeeeee.hhhhhhh..eeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3wia C  39 HDVHIEMTAQITDIEIDKGKIYKAWTFNGQAPGPLVVVNEGDTIHFTLKNMDPVVPHSMDFHAVHASPSKDFIDVMPNKSGTFTYPANKPGVFMYHCGTKPVLQHIANGMHGVIIVKPKNGYPTDKEVDREYVLIQNEWYKYNDMNDFQNGVPSYVVFSSKALKPGDPNTNGDTFTLKEKPLLAKVGEKIRLYINNVGPNEVSSFHVVGTVFDDVYLDGNPNNHLQGMQTVMLPASGGAVVEFTVTRPGTYPIVTHQFNHAQKGAVAMLKVTE 311
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308

Chain D from PDB  Type:PROTEIN  Length:273
 aligned with Q5L1X8_GEOKA | Q5L1X8 from UniProtKB/TrEMBL  Length:354

    Alignment length:273
                                    79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339   
         Q5L1X8_GEOKA    70 HDVHIEMTAQITDIEIDKGKIYKAWTFNGQAPGPLVVVNEGDTIHFTLKNMDPVVPHSMDFHAVHASPSKDFIDVMPNKSGTFTYPANKPGVFMYHCGTKPVLQHIANGMHGVIIVKPKNGYPTDKEVDREYVLIQNEWYKYNDMNDFQNGVPSYVVFSSKALKPGDPNTNGDTFTLKEKPLLAKVGEKIRLYINNVGPNEVSSFHVVGTVFDDVYLDGNPNNHLQGMQTVMLPASGGAVVEFTVTRPGTYPIVTHQFNHAQKGAVAMLKVTE 342
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeeeee..eeeeeeee........eeee...eeeeeeee.........ee.....hhhhhh.......eeeeeee....eeeeee....hhhhhhhh..eeeeeee......hhhhh.eeeeeeeeee....hhhhhhhh...eeeeeee.............hhhhhh.eeee...eeeeeeeeee....eeeee....eeeeee......eeeee..eee....eeeeeee....eeeeeee.hhhhhhh..eeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3wia D  39 HDVHIEMTAQITDIEIDKGKIYKAWTFNGQAPGPLVVVNEGDTIHFTLKNMDPVVPHSMDFHAVHASPSKDFIDVMPNKSGTFTYPANKPGVFMYHCGTKPVLQHIANGMHGVIIVKPKNGYPTDKEVDREYVLIQNEWYKYNDMNDFQNGVPSYVVFSSKALKPGDPNTNGDTFTLKEKPLLAKVGEKIRLYINNVGPNEVSSFHVVGTVFDDVYLDGNPNNHLQGMQTVMLPASGGAVVEFTVTRPGTYPIVTHQFNHAQKGAVAMLKVTE 311
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308

Chain E from PDB  Type:PROTEIN  Length:273
 aligned with Q5L1X8_GEOKA | Q5L1X8 from UniProtKB/TrEMBL  Length:354

    Alignment length:273
                                    79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339   
         Q5L1X8_GEOKA    70 HDVHIEMTAQITDIEIDKGKIYKAWTFNGQAPGPLVVVNEGDTIHFTLKNMDPVVPHSMDFHAVHASPSKDFIDVMPNKSGTFTYPANKPGVFMYHCGTKPVLQHIANGMHGVIIVKPKNGYPTDKEVDREYVLIQNEWYKYNDMNDFQNGVPSYVVFSSKALKPGDPNTNGDTFTLKEKPLLAKVGEKIRLYINNVGPNEVSSFHVVGTVFDDVYLDGNPNNHLQGMQTVMLPASGGAVVEFTVTRPGTYPIVTHQFNHAQKGAVAMLKVTE 342
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeeeee..eeeeeeee........eeee..eeeeeeeee.........ee.....hhhhhh.......eeeeeeee...eeeeee....hhhhhhhh..eeeeeee......hhhhh.eeeeeeeeee....hhhhhhhh...eeeeeee.............hhhhhh.eeee...eeeeeeeeee....eeeee....eeeeee......eeeee..eee....eeeeeee....eeeeeee.hhhhhhh..eeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3wia E  39 HDVHIEMTAQITDIEIDKGKIYKAWTFNGQAPGPLVVVNEGDTIHFTLKNMDPVVPHSMDFHAVHASPSKDFIDVMPNKSGTFTYPANKPGVFMYHCGTKPVLQHIANGMHGVIIVKPKNGYPTDKEVDREYVLIQNEWYKYNDMNDFQNGVPSYVVFSSKALKPGDPNTNGDTFTLKEKPLLAKVGEKIRLYINNVGPNEVSSFHVVGTVFDDVYLDGNPNNHLQGMQTVMLPASGGAVVEFTVTRPGTYPIVTHQFNHAQKGAVAMLKVTE 311
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308

Chain F from PDB  Type:PROTEIN  Length:273
 aligned with Q5L1X8_GEOKA | Q5L1X8 from UniProtKB/TrEMBL  Length:354

    Alignment length:273
                                    79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339   
         Q5L1X8_GEOKA    70 HDVHIEMTAQITDIEIDKGKIYKAWTFNGQAPGPLVVVNEGDTIHFTLKNMDPVVPHSMDFHAVHASPSKDFIDVMPNKSGTFTYPANKPGVFMYHCGTKPVLQHIANGMHGVIIVKPKNGYPTDKEVDREYVLIQNEWYKYNDMNDFQNGVPSYVVFSSKALKPGDPNTNGDTFTLKEKPLLAKVGEKIRLYINNVGPNEVSSFHVVGTVFDDVYLDGNPNNHLQGMQTVMLPASGGAVVEFTVTRPGTYPIVTHQFNHAQKGAVAMLKVTE 342
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeeeee..eeeeeeee........eeee..eeeeeeeee.........ee.....hhhhhh.......eeeeeeee...eeeeee....hhhhhhhh..eeeeeee......hhhhh.eeeeeeeeee....hhhhhhhh...eeeeee..............hhhhhh.eeee...eeeeeeeeee....eeeee....eeeeee......eeeee..eee....eeeeeee....eeeeeee.hhhhhhh..eeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3wia F  39 HDVHIEMTAQITDIEIDKGKIYKAWTFNGQAPGPLVVVNEGDTIHFTLKNMDPVVPHSMDFHAVHASPSKDFIDVMPNKSGTFTYPANKPGVFMYHCGTKPVLQHIANGMHGVIIVKPKNGYPTDKEVDREYVLIQNEWYKYNDMNDFQNGVPSYVVFSSKALKPGDPNTNGDTFTLKEKPLLAKVGEKIRLYINNVGPNEVSSFHVVGTVFDDVYLDGNPNNHLQGMQTVMLPASGGAVVEFTVTRPGTYPIVTHQFNHAQKGAVAMLKVTE 311
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308

Chain G from PDB  Type:PROTEIN  Length:273
 aligned with Q5L1X8_GEOKA | Q5L1X8 from UniProtKB/TrEMBL  Length:354

    Alignment length:273
                                    79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339   
         Q5L1X8_GEOKA    70 HDVHIEMTAQITDIEIDKGKIYKAWTFNGQAPGPLVVVNEGDTIHFTLKNMDPVVPHSMDFHAVHASPSKDFIDVMPNKSGTFTYPANKPGVFMYHCGTKPVLQHIANGMHGVIIVKPKNGYPTDKEVDREYVLIQNEWYKYNDMNDFQNGVPSYVVFSSKALKPGDPNTNGDTFTLKEKPLLAKVGEKIRLYINNVGPNEVSSFHVVGTVFDDVYLDGNPNNHLQGMQTVMLPASGGAVVEFTVTRPGTYPIVTHQFNHAQKGAVAMLKVTE 342
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeeeee..eeeeeeee........eeee..eeeeeeeee.........ee.....hhhhhh.......eeeeeeee...eeeeee....hhhhhhhh..eeeeeee......hhhhh.eeeeeeeeee....hhhhhhhh...eeeeeee.............hhhhhh.eeee...eeeeeeeeee....eeeee....eeeeee......eeeee..eee....eeeeeee....eeeeeee.hhhhhhh..eeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3wia G  39 HDVHIEMTAQITDIEIDKGKIYKAWTFNGQAPGPLVVVNEGDTIHFTLKNMDPVVPHSMDFHAVHASPSKDFIDVMPNKSGTFTYPANKPGVFMYHCGTKPVLQHIANGMHGVIIVKPKNGYPTDKEVDREYVLIQNEWYKYNDMNDFQNGVPSYVVFSSKALKPGDPNTNGDTFTLKEKPLLAKVGEKIRLYINNVGPNEVSSFHVVGTVFDDVYLDGNPNNHLQGMQTVMLPASGGAVVEFTVTRPGTYPIVTHQFNHAQKGAVAMLKVTE 311
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308

Chain H from PDB  Type:PROTEIN  Length:273
 aligned with Q5L1X8_GEOKA | Q5L1X8 from UniProtKB/TrEMBL  Length:354

    Alignment length:273
                                    79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339   
         Q5L1X8_GEOKA    70 HDVHIEMTAQITDIEIDKGKIYKAWTFNGQAPGPLVVVNEGDTIHFTLKNMDPVVPHSMDFHAVHASPSKDFIDVMPNKSGTFTYPANKPGVFMYHCGTKPVLQHIANGMHGVIIVKPKNGYPTDKEVDREYVLIQNEWYKYNDMNDFQNGVPSYVVFSSKALKPGDPNTNGDTFTLKEKPLLAKVGEKIRLYINNVGPNEVSSFHVVGTVFDDVYLDGNPNNHLQGMQTVMLPASGGAVVEFTVTRPGTYPIVTHQFNHAQKGAVAMLKVTE 342
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeeeee..eeeeeeee........eeee...eeeeeeee.........ee.....hhhhhh.......eeeeeee....eeeeee....hhhhhhhh..eeeeeee......hhhhh.eeeeeeeeee....hhhhhhhh...eeeeeee.............hhhhhh.eeee...eeeeeeeeee....eeeee....eeeeee......eeeee.eeee....eeeeeee....eeeeeee.hhhhhhh..eeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3wia H  39 HDVHIEMTAQITDIEIDKGKIYKAWTFNGQAPGPLVVVNEGDTIHFTLKNMDPVVPHSMDFHAVHASPSKDFIDVMPNKSGTFTYPANKPGVFMYHCGTKPVLQHIANGMHGVIIVKPKNGYPTDKEVDREYVLIQNEWYKYNDMNDFQNGVPSYVVFSSKALKPGDPNTNGDTFTLKEKPLLAKVGEKIRLYINNVGPNEVSSFHVVGTVFDDVYLDGNPNNHLQGMQTVMLPASGGAVVEFTVTRPGTYPIVTHQFNHAQKGAVAMLKVTE 311
                                    48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308

Chain I from PDB  Type:PROTEIN  Length:272
 aligned with Q5L1X8_GEOKA | Q5L1X8 from UniProtKB/TrEMBL  Length:354

    Alignment length:272
                                    80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340  
         Q5L1X8_GEOKA    71 DVHIEMTAQITDIEIDKGKIYKAWTFNGQAPGPLVVVNEGDTIHFTLKNMDPVVPHSMDFHAVHASPSKDFIDVMPNKSGTFTYPANKPGVFMYHCGTKPVLQHIANGMHGVIIVKPKNGYPTDKEVDREYVLIQNEWYKYNDMNDFQNGVPSYVVFSSKALKPGDPNTNGDTFTLKEKPLLAKVGEKIRLYINNVGPNEVSSFHVVGTVFDDVYLDGNPNNHLQGMQTVMLPASGGAVVEFTVTRPGTYPIVTHQFNHAQKGAVAMLKVTE 342
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeeee..eeeeeeee........eeee..eeeeeeeee.........ee.....hhhhhh.......eeeeeeee...eeeeee....hhhhhhhh..eeeeeee......hhhhh.eeeeeeeeee....hhhhhhhh...eeeeeee.............hhhhhh.eeee...eeeeeeeeee....eeeee....eeeeee......eeeee..eee....eeeeeee....eeeeeee.hhhhhhh..eeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3wia I  40 DVHIEMTAQITDIEIDKGKIYKAWTFNGQAPGPLVVVNEGDTIHFTLKNMDPVVPHSMDFHAVHASPSKDFIDVMPNKSGTFTYPANKPGVFMYHCGTKPVLQHIANGMHGVIIVKPKNGYPTDKEVDREYVLIQNEWYKYNDMNDFQNGVPSYVVFSSKALKPGDPNTNGDTFTLKEKPLLAKVGEKIRLYINNVGPNEVSSFHVVGTVFDDVYLDGNPNNHLQGMQTVMLPASGGAVVEFTVTRPGTYPIVTHQFNHAQKGAVAMLKVTE 311
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309

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	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

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		Gly A:236 - Pro A:237	[ RasMol ]
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