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Asym. Unit
Info
Asym.Unit (434 KB)
Biol.Unit 1 (147 KB)
Biol.Unit 2 (147 KB)
Biol.Unit 3 (148 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE N-TERMINAL 1-37 RESIDUES DELETED MUTANT OF GEOBACILLUS COPPER NITRITE REDUCTASE
Authors
:
Y. Fukuda, M. Nojiri
Date
:
09 Sep 13 (Deposition) - 23 Jul 14 (Release) - 23 Jul 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.77
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I
Biol. Unit 1: A,B,C (1x)
Biol. Unit 2: D,E,F (1x)
Biol. Unit 3: G,H,I (1x)
Keywords
:
Cupredoxin-Fold, Trimer, Nitrite Reduction, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Fukuda, H. Koteishi, R. Yoneda, T. Tamada, H. Takami, T. Inoue, M. Nojiri
Structural And Functional Characterization Of The Geobacillus Copper Nitrite Reductase: Involvement Of The Unique N-Terminal Region In The Interprotein Electron Transfer With Its Redox Partner
Biochim. Biophys. Acta V. 1837 396 2014
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Hetero Components
(2, 36)
Info
All Hetero Components
1a: COPPER (II) ION (CUa)
1b: COPPER (II) ION (CUb)
1c: COPPER (II) ION (CUc)
1d: COPPER (II) ION (CUd)
1e: COPPER (II) ION (CUe)
1f: COPPER (II) ION (CUf)
1g: COPPER (II) ION (CUg)
1h: COPPER (II) ION (CUh)
1i: COPPER (II) ION (CUi)
1j: COPPER (II) ION (CUj)
1k: COPPER (II) ION (CUk)
1l: COPPER (II) ION (CUl)
1m: COPPER (II) ION (CUm)
1n: COPPER (II) ION (CUn)
1o: COPPER (II) ION (CUo)
1p: COPPER (II) ION (CUp)
1q: COPPER (II) ION (CUq)
1r: COPPER (II) ION (CUr)
2a: FORMIC ACID (FMTa)
2b: FORMIC ACID (FMTb)
2c: FORMIC ACID (FMTc)
2d: FORMIC ACID (FMTd)
2e: FORMIC ACID (FMTe)
2f: FORMIC ACID (FMTf)
2g: FORMIC ACID (FMTg)
2h: FORMIC ACID (FMTh)
2i: FORMIC ACID (FMTi)
2j: FORMIC ACID (FMTj)
2k: FORMIC ACID (FMTk)
2l: FORMIC ACID (FMTl)
2m: FORMIC ACID (FMTm)
2n: FORMIC ACID (FMTn)
2o: FORMIC ACID (FMTo)
2p: FORMIC ACID (FMTp)
2q: FORMIC ACID (FMTq)
2r: FORMIC ACID (FMTr)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CU
18
Ligand/Ion
COPPER (II) ION
2
FMT
18
Ligand/Ion
FORMIC ACID
[
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Sites
(36, 36)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:95 , CYS A:135 , HIS A:143 , MET A:148
BINDING SITE FOR RESIDUE CU A 401
02
AC2
SOFTWARE
HIS A:100 , HIS A:134 , HIS B:294 , FMT B:401 , HOH B:671
BINDING SITE FOR RESIDUE CU A 402
03
AC3
SOFTWARE
ASP A:98 , GLY A:136 , HOH A:647 , VAL B:246 , FMT B:401
BINDING SITE FOR RESIDUE FMT A 403
04
AC4
SOFTWARE
HIS A:244 , VAL A:246 , HIS A:294 , PHE A:296 , HOH A:690 , ASP C:98 , HIS C:134 , CU C:403 , FMT C:404
BINDING SITE FOR RESIDUE FMT A 404
05
AC5
SOFTWARE
ASP A:98 , HIS A:134 , CU A:402 , FMT A:403 , VAL B:246 , HIS B:294 , PHE B:296 , HOH B:671
BINDING SITE FOR RESIDUE FMT B 401
06
AC6
SOFTWARE
HIS B:95 , CYS B:135 , HIS B:143 , MET B:148
BINDING SITE FOR RESIDUE CU B 402
07
AC7
SOFTWARE
HIS B:100 , HIS B:134 , HIS C:294 , FMT C:401 , HOH C:675
BINDING SITE FOR RESIDUE CU B 403
08
AC8
SOFTWARE
ASP B:98 , PHE B:110 , GLY B:136 , HOH B:627 , VAL C:246 , FMT C:401
BINDING SITE FOR RESIDUE FMT B 404
09
AC9
SOFTWARE
ASP B:98 , HIS B:134 , CU B:403 , FMT B:404 , VAL C:246 , HIS C:294 , PHE C:296 , HOH C:672 , HOH C:675
BINDING SITE FOR RESIDUE FMT C 401
10
BC1
SOFTWARE
HIS C:95 , CYS C:135 , HIS C:143 , MET C:148
BINDING SITE FOR RESIDUE CU C 402
11
BC2
SOFTWARE
HIS A:294 , FMT A:404 , HOH A:690 , HIS C:100 , HIS C:134
BINDING SITE FOR RESIDUE CU C 403
12
BC3
SOFTWARE
FMT A:404 , ASP C:98 , GLY C:136 , HOH C:648
BINDING SITE FOR RESIDUE FMT C 404
13
BC4
SOFTWARE
HIS D:95 , CYS D:135 , HIS D:143 , MET D:148
BINDING SITE FOR RESIDUE CU D 401
14
BC5
SOFTWARE
HIS D:100 , HIS D:134 , FMT D:404 , HOH D:663 , HIS E:294
BINDING SITE FOR RESIDUE CU D 402
15
BC6
SOFTWARE
ASP D:98 , GLY D:136 , FMT D:404 , HOH D:652
BINDING SITE FOR RESIDUE FMT D 403
16
BC7
SOFTWARE
ASP D:98 , HIS D:134 , CU D:402 , FMT D:403 , HOH D:663 , HIS E:244 , VAL E:246 , HIS E:294
BINDING SITE FOR RESIDUE FMT D 404
17
BC8
SOFTWARE
HIS D:244 , VAL D:246 , VAL D:292 , HIS D:294 , PHE D:296 , HOH D:664 , ASP F:98 , HIS F:134 , CU F:402 , FMT F:403
BINDING SITE FOR RESIDUE FMT D 405
18
BC9
SOFTWARE
HIS E:95 , CYS E:135 , HIS E:143 , MET E:148
BINDING SITE FOR RESIDUE CU E 401
19
CC1
SOFTWARE
HIS E:100 , HIS E:134 , FMT E:404 , HOH E:666 , HIS F:294
BINDING SITE FOR RESIDUE CU E 402
20
CC2
SOFTWARE
ASP E:98 , GLY E:136 , FMT E:404 , HOH E:649
BINDING SITE FOR RESIDUE FMT E 403
21
CC3
SOFTWARE
ASP E:98 , HIS E:134 , CU E:402 , FMT E:403 , HOH E:666 , VAL F:246 , HIS F:294 , PHE F:296
BINDING SITE FOR RESIDUE FMT E 404
22
CC4
SOFTWARE
HIS F:95 , CYS F:135 , HIS F:143 , MET F:148
BINDING SITE FOR RESIDUE CU F 401
23
CC5
SOFTWARE
HIS D:294 , FMT D:405 , HOH D:664 , HIS F:100 , HIS F:134
BINDING SITE FOR RESIDUE CU F 402
24
CC6
SOFTWARE
FMT D:405 , ASP F:98 , GLY F:136
BINDING SITE FOR RESIDUE FMT F 403
25
CC7
SOFTWARE
HIS G:95 , CYS G:135 , HIS G:143 , MET G:148
BINDING SITE FOR RESIDUE CU G 401
26
CC8
SOFTWARE
HIS G:100 , HIS G:134 , HOH G:665 , HIS H:294 , FMT H:401
BINDING SITE FOR RESIDUE CU G 402
27
CC9
SOFTWARE
ASP G:98 , PHE G:110 , GLY G:136 , HOH G:610 , VAL H:246 , FMT H:401
BINDING SITE FOR RESIDUE FMT G 403
28
DC1
SOFTWARE
VAL G:246 , HIS G:294 , PHE G:296 , HOH G:666 , ASP I:98 , HIS I:134 , CU I:403 , FMT I:404
BINDING SITE FOR RESIDUE FMT G 404
29
DC2
SOFTWARE
ASP G:98 , HIS G:134 , CU G:402 , FMT G:403 , HOH G:665 , VAL H:246 , VAL H:292 , HIS H:294 , PHE H:296
BINDING SITE FOR RESIDUE FMT H 401
30
DC3
SOFTWARE
HIS H:95 , CYS H:135 , HIS H:143 , MET H:148
BINDING SITE FOR RESIDUE CU H 402
31
DC4
SOFTWARE
HIS H:100 , HIS H:134 , HIS I:294 , FMT I:401 , HOH I:658
BINDING SITE FOR RESIDUE CU H 403
32
DC5
SOFTWARE
ASP H:98 , GLY H:136 , HOH H:594 , VAL I:246 , FMT I:401
BINDING SITE FOR RESIDUE FMT H 404
33
DC6
SOFTWARE
ASP H:98 , HIS H:134 , CU H:403 , FMT H:404 , VAL I:246 , HIS I:294 , PHE I:296 , HOH I:658
BINDING SITE FOR RESIDUE FMT I 401
34
DC7
SOFTWARE
HIS I:95 , CYS I:135 , HIS I:143 , MET I:148
BINDING SITE FOR RESIDUE CU I 402
35
DC8
SOFTWARE
HIS G:294 , FMT G:404 , HOH G:666 , HIS I:100 , HIS I:134
BINDING SITE FOR RESIDUE CU I 403
36
DC9
SOFTWARE
VAL G:246 , FMT G:404 , ASP I:98 , GLY I:136 , HOH I:635
BINDING SITE FOR RESIDUE FMT I 404
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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