3UXL - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   P. PUTIDA MANDELATE RACEMASE CO-CRYSTALLIZED WITH THE INTERMEDIATE ANALOGUE CUPFERRON

Authors :   A. D. Lietzan, E. Pellmann, M. St Maurice

Date :   05 Dec 11 (Deposition) - 08 Feb 12 (Release) - 29 Feb 12 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.20

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,C  (4x)
Biol. Unit 2: B,D  (4x)

Keywords :   Enolase Superfamily Enzyme, Isomerase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. D. Lietzan, M. Nagar, E. A. Pellmann, J. R. Bourque, S. L. Bearne, M. St Maurice
Structure Of Mandelate Racemase With Bound Intermediate Analogues Benzohydroxamate And Cupferron.
Biochemistry V. 51 1160 2012
PubMed-ID: 22264153 | Reference-DOI: 10.1021/BI2018514

Molecule 1 - MANDELATE RACEMASE
	Chains	:	A, B, C, D
	EC Number	:	5.1.2.2
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET-52B(+)
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Gene	:	MDLA
	Organism Scientific	:	PSEUDOMONAS PUTIDA
	Organism Taxid	:	303
	Synonym	:	MR

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (4x)	:	A		C
Biological Unit 2 (4x)	:		B		D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 8)

No.	Name	Count	Type	Full Name
1	CFI	4	Ligand/Ion	1-HYDROXY-2-OXO-1-PHENYLHYDRAZINE
2	MG	4	Ligand/Ion	MAGNESIUM ION

Biological Unit 1 (1, 8)

No.	Name	Count	Type	Full Name
1	CFI	8	Ligand/Ion	1-HYDROXY-2-OXO-1-PHENYLHYDRAZINE
2	MG	-1	Ligand/Ion	MAGNESIUM ION

Biological Unit 2 (1, 8)

No.	Name	Count	Type	Full Name
1	CFI	8	Ligand/Ion	1-HYDROXY-2-OXO-1-PHENYLHYDRAZINE
2	MG	-1	Ligand/Ion	MAGNESIUM ION

Asymmetric Unit (8, 8)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ASP A:195 , GLU A:221 , GLU A:247 , CFI A:361 , HOH A:518	BINDING SITE FOR RESIDUE MG A 360
2	AC2	SOFTWARE	LYS A:164 , LYS A:166 , ASP A:195 , ASN A:197 , GLU A:221 , GLU A:247 , HIS A:297 , GLU A:317 , MG A:360 , HOH A:518 , HOH A:591	BINDING SITE FOR RESIDUE CFI A 361
3	AC3	SOFTWARE	ASP B:195 , GLU B:221 , GLU B:247 , CFI B:361 , HOH B:520	BINDING SITE FOR RESIDUE MG B 360
4	AC4	SOFTWARE	LYS B:164 , LYS B:166 , ASP B:195 , ASN B:197 , GLU B:221 , GLU B:247 , HIS B:297 , GLU B:317 , MG B:360 , HOH B:520 , HOH B:546	BINDING SITE FOR RESIDUE CFI B 361
5	AC5	SOFTWARE	ASP C:195 , GLU C:221 , GLU C:247 , CFI C:361 , HOH C:524	BINDING SITE FOR RESIDUE MG C 360
6	AC6	SOFTWARE	LYS C:164 , LYS C:166 , ASP C:195 , ASN C:197 , GLU C:221 , GLU C:247 , HIS C:297 , MG C:360 , HOH C:524 , HOH C:603	BINDING SITE FOR RESIDUE CFI C 361
7	AC7	SOFTWARE	ASP D:195 , GLU D:221 , GLU D:247 , CFI D:361 , HOH D:525	BINDING SITE FOR RESIDUE MG D 360
8	AC8	SOFTWARE	LYS D:164 , LYS D:166 , ASP D:195 , ASN D:197 , GLU D:221 , GLU D:247 , HIS D:297 , MG D:360 , HOH D:525 , HOH D:604	BINDING SITE FOR RESIDUE CFI D 361

(no "SS Bond" information available for 3UXL)

(no "Cis Peptide Bond" information available for 3UXL)

(no "SAP(SNP)/Variant" information available for 3UXL)

Asymmetric Unit (2, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	MR_MLE_1	PS00908	Mandelate racemase / muconate lactonizing enzyme family signature 1.	MANR_PSEPU	103-128	4	A:103-128 B:103-128 C:103-128 D:103-128
2	MR_MLE_2	PS00909	Mandelate racemase / muconate lactonizing enzyme family signature 2.	MANR_PSEPU	192-223	4	A:192-223 B:192-223 C:192-223 D:192-223

Biological Unit 1 (2, 16)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	MR_MLE_1	PS00908	Mandelate racemase / muconate lactonizing enzyme family signature 1.	MANR_PSEPU	103-128	8	A:103-128 - C:103-128 -
2	MR_MLE_2	PS00909	Mandelate racemase / muconate lactonizing enzyme family signature 2.	MANR_PSEPU	192-223	8	A:192-223 - C:192-223 -

Biological Unit 2 (2, 16)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	MR_MLE_1	PS00908	Mandelate racemase / muconate lactonizing enzyme family signature 1.	MANR_PSEPU	103-128	8	- B:103-128 - D:103-128
2	MR_MLE_2	PS00909	Mandelate racemase / muconate lactonizing enzyme family signature 2.	MANR_PSEPU	192-223	8	- B:192-223 - D:192-223

(no "Exon" information available for 3UXL)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:357
 aligned with MANR_PSEPU | P11444 from UniProtKB/Swiss-Prot  Length:359

    Alignment length:357
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       
           MANR_PSEPU     3 EVLITGLRTRAVNVPLAYPVHTAVGTVGTAPLVLIDLATSAGVVGHSYLFAYTPVALKSLKQLLDDMAAMIVNEPLAPVSLEAMLAKRFCLAGYTGLIRMAAAGIDMAAWDALGKVHETPLVKLLGANARPVQAYDSHSLDGVKLATERAVTAAELGFRAVKTKIGYPALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGVTWIEEPTLQHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIGGVTGWIRASALAQQFGIPMSSHLFQEISAHLLAATPTAHWLERLDLAGSVIEPTLTFEGGNAVIPDLPGVGIIWREKEIGKYLV 359
               SCOP domains d3uxla1 A:3-132 automated matches                                                                                                 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeeeeeeeeeeeee..eeeeeeeeeeeeeee....eeeeeee..hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh..hhhhhh......eeeeee...hhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhhhh..eee......hhhhhhhhhh.....eee.....hhhhhhhhhhh....ee.......hhhhhhhhhhhhhhhh........hhhhhhhhhhh......eee............eee..eee...........hhhhhh.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------MR_MLE_1  PDB: A:103-128  ---------------------------------------------------------------MR_MLE_2  PDB: A:192-223        ---------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3uxl A   3 EVLITGLRTRAVNVPLAYPVHTAVGTVGTAPLVLIDLATSAGVVGHSYLFAYTPVALKSLKQLLDDMAAMIVNEPLAPVSLEAMLAKRFCLAGYTGLIRMAAAGIDMAAWDALGKVHETPLVKLLGANARPVQAYDSHSLDGVKLATERAVTAAELGFRAVKTKIGYPALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGVTWIEEPTLQHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIGGVTGWIRASALAQQFGIPMSSHLFQEISAHLLAATPTAHWLERLDLAGSVIEPTLTFEGGNAVIPDLPGVGIIWREKEIGKYLV 359
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352

Chain B from PDB  Type:PROTEIN  Length:357
 aligned with MANR_PSEPU | P11444 from UniProtKB/Swiss-Prot  Length:359

    Alignment length:357
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       
           MANR_PSEPU     3 EVLITGLRTRAVNVPLAYPVHTAVGTVGTAPLVLIDLATSAGVVGHSYLFAYTPVALKSLKQLLDDMAAMIVNEPLAPVSLEAMLAKRFCLAGYTGLIRMAAAGIDMAAWDALGKVHETPLVKLLGANARPVQAYDSHSLDGVKLATERAVTAAELGFRAVKTKIGYPALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGVTWIEEPTLQHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIGGVTGWIRASALAQQFGIPMSSHLFQEISAHLLAATPTAHWLERLDLAGSVIEPTLTFEGGNAVIPDLPGVGIIWREKEIGKYLV 359
               SCOP domains d3uxlb1 B:3-132 automated matches                                                                                                 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeeeeeeeeeeeee..eeeeeeeeeeeeeee....eeeeeee..hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh..hhhhhh......eeeeee....hhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhhhh..eee......hhhhhhhhhhh....eee.....hhhhhhhhhhh....ee.......hhhhhhhhhhhhhhhh........hhhhhhhhhhh......eee............eee..eee...........hhhhhh.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------MR_MLE_1  PDB: B:103-128  ---------------------------------------------------------------MR_MLE_2  PDB: B:192-223        ---------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3uxl B   3 EVLITGLRTRAVNVPLAYPVHTAVGTVGTAPLVLIDLATSAGVVGHSYLFAYTPVALKSLKQLLDDMAAMIVNEPLAPVSLEAMLAKRFCLAGYTGLIRMAAAGIDMAAWDALGKVHETPLVKLLGANARPVQAYDSHSLDGVKLATERAVTAAELGFRAVKTKIGYPALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGVTWIEEPTLQHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIGGVTGWIRASALAQQFGIPMSSHLFQEISAHLLAATPTAHWLERLDLAGSVIEPTLTFEGGNAVIPDLPGVGIIWREKEIGKYLV 359
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352

Chain C from PDB  Type:PROTEIN  Length:357
 aligned with MANR_PSEPU | P11444 from UniProtKB/Swiss-Prot  Length:359

    Alignment length:357
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       
           MANR_PSEPU     3 EVLITGLRTRAVNVPLAYPVHTAVGTVGTAPLVLIDLATSAGVVGHSYLFAYTPVALKSLKQLLDDMAAMIVNEPLAPVSLEAMLAKRFCLAGYTGLIRMAAAGIDMAAWDALGKVHETPLVKLLGANARPVQAYDSHSLDGVKLATERAVTAAELGFRAVKTKIGYPALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGVTWIEEPTLQHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIGGVTGWIRASALAQQFGIPMSSHLFQEISAHLLAATPTAHWLERLDLAGSVIEPTLTFEGGNAVIPDLPGVGIIWREKEIGKYLV 359
               SCOP domains d3uxlc1 C:3-132 automated matches                                                                                                 d3uxlc2 C:133-359 automated matches                                                                                                                                                                                                 SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeeeeeeeeeeeee..eeeeeeeeeeeeeee....eeeeeee..hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh..hhhhhh......eeeeee...hhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhhhh..eee......hhhhhhhhhhh....eee.....hhhhhhhhhhh....ee.......hhhhhhhhhhhhhhhhh.......hhhhhhhhhhh......eee............eee..eee...........hhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------MR_MLE_1  PDB: C:103-128  ---------------------------------------------------------------MR_MLE_2  PDB: C:192-223        ---------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3uxl C   3 EVLITGLRTRAVNVPLAYPVHTAVGTVGTAPLVLIDLATSAGVVGHSYLFAYTPVALKSLKQLLDDMAAMIVNEPLAPVSLEAMLAKRFCLAGYTGLIRMAAAGIDMAAWDALGKVHETPLVKLLGANARPVQAYDSHSLDGVKLATERAVTAAELGFRAVKTKIGYPALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGVTWIEEPTLQHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIGGVTGWIRASALAQQFGIPMSSHLFQEISAHLLAATPTAHWLERLDLAGSVIEPTLTFEGGNAVIPDLPGVGIIWREKEIGKYLV 359
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352

Chain D from PDB  Type:PROTEIN  Length:357
 aligned with MANR_PSEPU | P11444 from UniProtKB/Swiss-Prot  Length:359

    Alignment length:357
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       
           MANR_PSEPU     3 EVLITGLRTRAVNVPLAYPVHTAVGTVGTAPLVLIDLATSAGVVGHSYLFAYTPVALKSLKQLLDDMAAMIVNEPLAPVSLEAMLAKRFCLAGYTGLIRMAAAGIDMAAWDALGKVHETPLVKLLGANARPVQAYDSHSLDGVKLATERAVTAAELGFRAVKTKIGYPALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGVTWIEEPTLQHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIGGVTGWIRASALAQQFGIPMSSHLFQEISAHLLAATPTAHWLERLDLAGSVIEPTLTFEGGNAVIPDLPGVGIIWREKEIGKYLV 359
               SCOP domains d3uxld1 D:3-132 automated matches                                                                                                 d3uxld2 D:133-359 automated matches                                                                                                                                                                                                 SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeeeeeeeeeeeee..eeeeeeeeeeeeeee....eeeeeee..hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh..hhhhhh......eeeeee...hhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhhhh..eee......hhhhhhhhhhh....eee.....hhhhhhhhhhh....ee.......hhhhhhhhhhhhhhhhh.......hhhhhhhhhhh......eee............eee..eee...........hhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------MR_MLE_1  PDB: D:103-128  ---------------------------------------------------------------MR_MLE_2  PDB: D:192-223        ---------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3uxl D   3 EVLITGLRTRAVNVPLAYPVHTAVGTVGTAPLVLIDLATSAGVVGHSYLFAYTPVALKSLKQLLDDMAAMIVNEPLAPVSLEAMLAKRFCLAGYTGLIRMAAAGIDMAAWDALGKVHETPLVKLLGANARPVQAYDSHSLDGVKLATERAVTAAELGFRAVKTKIGYPALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGVTWIEEPTLQHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIGGVTGWIRASALAQQFGIPMSSHLFQEISAHLLAATPTAHWLERLDLAGSVIEPTLTFEGGNAVIPDLPGVGIIWREKEIGKYLV 359
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a+b) (23004)

Fold: Enolase N-terminal domain-like (211)

Superfamily: Enolase N-terminal domain-like (211)

Family: automated matches (123)

Protein domain: automated matches (123)

Pseudomonas putida [TaxId: 303] (5)

1a	d3uxla1	A:3-132
1b	d3uxlb1	B:3-132
1c	d3uxlc1	C:3-132
1d	d3uxld1	D:3-132

Class: Alpha and beta proteins (a/b) (23833)

Fold: TIM beta/alpha-barrel (3956)

Superfamily: Enolase C-terminal domain-like (212)

Family: D-glucarate dehydratase-like (65)

Protein domain: automated matches (16)

Pseudomonas putida [TaxId: 303] (5)

2a	d3uxlc2	C:133-359
2b	d3uxld2	D:133-359

(no "CATH Domain" information available for 3UXL)

(no "Pfam Domain" information available for 3UXL)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (MANR_PSEPU | P11444)

molecular function
	GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
	GO:0016853	isomerase activity	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
	GO:0018838	mandelate racemase activity	Catalysis of the reaction: (S)-mandelate = (R)-mandelate.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
biological process
	GO:0009063	cellular amino acid catabolic process	The chemical reactions and pathways resulting in the breakdown of amino acids, organic acids containing one or more amino substituents.
	GO:0019596	mandelate catabolic process	The chemical reactions and pathways resulting in the breakdown of mandelate, the anion of mandelic acid. Mandelic acid (alpha-hydroxybenzeneacetic acid) is an 8-carbon alpha-hydroxy acid (AHA) that is used in organic chemistry and as a urinary antiseptic.
	GO:0018924	mandelate metabolic process	The chemical reactions and pathways involving mandelate, the anion of mandelic acid. Mandelic acid (alpha-hydroxybenzeneacetic acid) is an 8-carbon alpha-hydroxy acid (AHA) that is used in organic chemistry and as a urinary antiseptic.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

Asymmetric Unit
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	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 3uxl)

Biological Units
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	3uxl
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	MANR_PSEPU \| P11444
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	5.1.2.2
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	MANR_PSEPU \| P11444
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UniProtKB/Swiss-Prot
	MANR_PSEPU \| P11444	:	1dtn 1mdl 1mdr 1mns 1mra 2mnr 3uxk 4fp1 4hnc 4m6u 4x2p

1mdr
3uxk	P. PUTIDA MANDELATE RACEMASE CO-CRYSTALLIZED WITH THE INTERMEDIATE ANALOGUE BENZOHYDROXAMATE

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 8)

Sites (8, 8)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (2, 8)

Exons (0, 0)

Sequences/Alignments

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SCOP Domains (2, 6)

CATH Domains (0, 0)

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Gene Ontology (8, 8)

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Related Entries

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Related Entries Specified in the PDB File