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Title :   CRYSTAL STRUCTURE OF CARVEOL DEHYDROGENASE ((+)-TRANS-CARVEOL DEHYDROGENASE) FROM MYCOBACTERIUM AVIUM

Authors :   Seattle Structural Genomics Center For Infectious Disease (S

Date :   29 Nov 11 (Deposition) - 14 Dec 11 (Release) - 15 Apr 15 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.55

Chains :   Asym./Biol. Unit : A,B,C,D

Keywords :   Ssgcid, Structural Genomics, Seattle Structural Genomics Center For Infectious Disease, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   L. Baugh, I. Phan, D. W. Begley, M. C. Clifton, B. Armour, D. M. Dranow, B. M. Taylor, M. M. Muruthi, J. Abendroth, J. W. Fairman, D. Fox, S. H. Dieterich, B. L. Staker, A. S. Gardberg, R. Choi, S. N. Hewitt, A. J. Napuli, J. Myers, L. K. Barrett, Y. Zhang, M. Ferrell, E. Mundt, K. Thompkins, N. Tran, S. Lyons-Abbott, A. Abramov, A. Sekar, D. Serbzhinskiy, D. Lorimer, G. W. Buchko, R. Stacy, L. J. Stewart, T. E. Edwards, W. C. Van Voorhis, P. J. Myler
Increasing The Structural Coverage Of Tuberculosis Drug Targets.
Tuberculosis (Edinb) V. 95 142 2015
PubMed-ID: 25613812 | Reference-DOI: 10.1016/J.TUBE.2014.12.003

Molecule 1 - CARVEOL DEHYDROGENASE ((+)-TRANS-CARVEOL DEHYDROGENASE)
	Chains	:	A, B, C, D
	EC Number	:	1.1.1.275
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	AVA0421
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Gene	:	MAV_0896
	Organism Scientific	:	MYCOBACTERIUM AVIUM
	Organism Taxid	:	243243
	Strain	:	104

		1	2	3	4
Asymmetric/Biological Unit	:	A	B	C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (3, 13)

No.	Name	Count	Type	Full Name
1	EDO	5	Ligand/Ion	1,2-ETHANEDIOL
2	NAD	4	Ligand/Ion	NICOTINAMIDE-ADENINE-DINUCLEOTIDE
3	PG4	4	Ligand/Ion	TETRAETHYLENE GLYCOL

Asymmetric Unit (13, 13)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	GLY A:14 , ARG A:17 , GLY A:18 , GLN A:19 , ASP A:38 , ILE A:39 , ILE A:43 , SER A:55 , VAL A:79 , ASP A:80 , VAL A:81 , ASN A:107 , ALA A:108 , GLY A:109 , ILE A:110 , ILE A:131 , THR A:159 , SER A:160 , SER A:161 , TYR A:174 , LYS A:178 , PRO A:204 , THR A:205 , HIS A:206 , VAL A:207 , THR A:209 , PRO A:210 , MET A:211 , HOH A:289 , HOH A:294 , HOH A:297 , HOH A:562 , HOH A:579	BINDING SITE FOR RESIDUE NAD A 300
02	AC2	SOFTWARE	GLY A:151 , ARG A:152 , GLN A:194 , HIS A:195 , HOH A:773 , HOH A:904 , PRO D:244	BINDING SITE FOR RESIDUE PG4 A 305
03	AC3	SOFTWARE	ASP A:263 , ARG A:266 , HOH A:355	BINDING SITE FOR RESIDUE EDO A 310
04	AC4	SOFTWARE	GLY B:14 , ARG B:17 , GLN B:19 , ASP B:38 , ILE B:39 , ILE B:43 , SER B:55 , VAL B:79 , ASP B:80 , VAL B:81 , ASN B:107 , ALA B:108 , GLY B:109 , ILE B:110 , ILE B:131 , THR B:159 , SER B:160 , SER B:161 , TYR B:174 , LYS B:178 , PRO B:204 , THR B:205 , HIS B:206 , VAL B:207 , THR B:209 , PRO B:210 , MET B:211 , HOH B:298 , HOH B:318 , HOH B:409 , HOH B:703	BINDING SITE FOR RESIDUE NAD B 300
05	AC5	SOFTWARE	GLY B:151 , MET B:196 , HOH B:507 , HOH B:849	BINDING SITE FOR RESIDUE PG4 B 305
06	AC6	SOFTWARE	ASP B:263 , HOH C:354	BINDING SITE FOR RESIDUE EDO B 310
07	AC7	SOFTWARE	GLY B:111 , TYR B:174 , HOH B:606 , HOH B:718	BINDING SITE FOR RESIDUE EDO B 286
08	AC8	SOFTWARE	GLY C:14 , ARG C:17 , GLN C:19 , ASP C:38 , ILE C:39 , ILE C:43 , SER C:55 , VAL C:79 , ASP C:80 , VAL C:81 , ASN C:107 , ALA C:108 , GLY C:109 , ILE C:110 , ILE C:131 , THR C:159 , SER C:160 , SER C:161 , TYR C:174 , LYS C:178 , PRO C:204 , THR C:205 , HIS C:206 , VAL C:207 , THR C:209 , PRO C:210 , MET C:211 , HOH C:288 , HOH C:295 , HOH C:411 , HOH C:580	BINDING SITE FOR RESIDUE NAD C 300
09	AC9	SOFTWARE	GLY C:151 , ARG C:152 , GLN C:194 , HIS C:195	BINDING SITE FOR RESIDUE PG4 C 305
10	BC1	SOFTWARE	ASP C:263 , ARG C:266	BINDING SITE FOR RESIDUE EDO C 310
11	BC2	SOFTWARE	GLY D:14 , ARG D:17 , GLY D:18 , GLN D:19 , ASP D:38 , ILE D:39 , ILE D:43 , SER D:55 , VAL D:79 , ASP D:80 , VAL D:81 , ASN D:107 , ALA D:108 , GLY D:109 , ILE D:110 , ILE D:131 , THR D:159 , SER D:160 , SER D:161 , TYR D:174 , LYS D:178 , PRO D:204 , THR D:205 , HIS D:206 , VAL D:207 , THR D:209 , PRO D:210 , MET D:211 , HOH D:301 , HOH D:306 , HOH D:504 , HOH D:565	BINDING SITE FOR RESIDUE NAD D 300
12	BC3	SOFTWARE	PRO A:244 , GLY D:151 , ARG D:152 , GLY D:153 , GLN D:194 , MET D:196 , HOH D:772	BINDING SITE FOR RESIDUE PG4 D 305
13	BC4	SOFTWARE	ASP D:263 , ARG D:266 , HOH D:323	BINDING SITE FOR RESIDUE EDO D 310

(no "SS Bond" information available for 3UVE)

(no "Cis Peptide Bond" information available for 3UVE)

(no "SAP(SNP)/Variant" information available for 3UVE)

(no "PROSITE Motif" information available for 3UVE)

(no "Exon" information available for 3UVE)

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:281
 aligned with A0A0H2ZTN5_M | A0A0H2ZTN5 from UniProtKB/TrEMBL  Length:282

    Alignment length:281
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281 
         A0A0H2ZTN5_M     2 TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCLK 282
               SCOP domains d3uvea_ A: automated matches                                                                                                                                                                                                                                                              SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeee...hhhhhhhhhhhhhh..eeeeee.................hhhhhhhhhhhhhh....eeeee....hhhhhhhhhhhhhhhhh...eeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeee.hhhhh.....hhhhhhhhhhhhhhhhhhhhhhh...eeeeeeee.........hhhhhhhhh......hhhhhhhhhhh.........hhhhhhhhhhhhhhhhhh.....eeee..hhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3uve A   2 TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCLK 282
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281

Chain B from PDB  Type:PROTEIN  Length:281
 aligned with A0A0H2ZTN5_M | A0A0H2ZTN5 from UniProtKB/TrEMBL  Length:282

    Alignment length:281
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281 
         A0A0H2ZTN5_M     2 TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCLK 282
               SCOP domains d3uveb_ B: automated matches                                                                                                                                                                                                                                                              SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeee...hhhhhhhhhhhhhh..eeeeee.................hhhhhhhhhhhhhh....eeeee....hhhhhhhhhhhhhhhhh...eeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeee.hhhhh.....hhhhhhhhhhhhhhhhhhhhhhh...eeeeeeee.........hhhhhhhhh......hhhhhhhhhhh.........hhhhhhhhhhhhhhhhhh.....eeee..hhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3uve B   2 TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCLK 282
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281

Chain C from PDB  Type:PROTEIN  Length:281
 aligned with A0A0H2ZTN5_M | A0A0H2ZTN5 from UniProtKB/TrEMBL  Length:282

    Alignment length:281
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281 
         A0A0H2ZTN5_M     2 TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCLK 282
               SCOP domains d3uvec_ C: automated matches                                                                                                                                                                                                                                                              SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeee...hhhhhhhhhhhhhh..eeeeee.................hhhhhhhhhhhhhh....eeeee....hhhhhhhhhhhhhhhhh...eeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeee.hhhhh.....hhhhhhhhhhhhhhhhhhhhhhh...eeeeeeee.........hhhhhhhhh......hhhhhhhhhhh.........hhhhhhhhhhhhhhhhhh.....eeee..hhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3uve C   2 TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCLK 282
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281

Chain D from PDB  Type:PROTEIN  Length:281
 aligned with A0A0H2ZTN5_M | A0A0H2ZTN5 from UniProtKB/TrEMBL  Length:282

    Alignment length:281
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281 
         A0A0H2ZTN5_M     2 TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCLK 282
               SCOP domains d3uved_ D: automated matches                                                                                                                                                                                                                                                              SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeee...hhhhhhhhhhhhhh..eeeeee.................hhhhhhhhhhhhhh....eeeee....hhhhhhhhhhhhhhhhh...eeee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeee.hhhhh.....hhhhhhhhhhhhhhhhhhhhhhh...eeeeeeee.........hhhhhhhhh......hhhhhhhhhhh.........hhhhhhhhhhhhhhhhhh.....eeee..hhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3uve D   2 TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCLK 282
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric/Biological Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a/b) (23833)

Fold: NAD(P)-binding Rossmann-fold domains (1604)

Superfamily: NAD(P)-binding Rossmann-fold domains (1604)

Family: automated matches (447)

Protein domain: automated matches (447)

Mycobacterium avium [TaxId: 243243] (4)

1a	d3uvea_	A:
1b	d3uveb_	B:
1c	d3uvec_	C:
1d	d3uved_	D:

(no "CATH Domain" information available for 3UVE)

(no "Pfam Domain" information available for 3UVE)

Asymmetric/Biological Unit(hide GO term definitions)

(no "Gene Ontology" information available for 3UVE)

Asymmetric/Biological Unit
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	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 3uve)

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	3uve
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Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 13)

Sites (13, 13)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

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