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(-) Description

Title :  CRYSTALLOGRAPHIC STRUCTURE OF FKBP12 FROM AEDES AEGYPTI
 
Authors :  R. Sreekanth, K. Q. Saw, H. S. Yoon
Date :  20 Nov 11  (Deposition) - 27 Jun 12  (Release) - 27 Jun 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.30
Chains :  Asym./Biol. Unit :  A
Keywords :  Fkbp12, Isomerase, Fk506 Binding (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Rajan, K. Q. Saw, Q. T. Nguyen, K. Baek, H. S. Yoon
High-Resolution Crystal Structure Of Fkbp12 From Aedes Aegypti.
Protein Sci. V. 21 1080 2012
PubMed-ID: 22517662  |  Reference-DOI: 10.1002/PRO.2079

(-) Compounds

Molecule 1 - FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
    Chains: A
    EC Number: 5.2.1.8
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PETSUMO
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: AAEL007883, AAEL_AAEL007883
    Organism Common: YELLOWFEVER MOSQUITO
    Organism Scientific: AEDES AEGYPTI
    Organism Taxid: 7159
    Synonym: FKBP12, FK506-BINDING PROTEIN

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1MPO1Ligand/Ion3[N-MORPHOLINO]PROPANE SULFONIC ACID
2SO41Ligand/IonSULFATE ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETYR A:27 , ASP A:38 , VAL A:56 , ILE A:57 , TRP A:60 , TYR A:83 , PRO A:94 , HOH A:146 , HOH A:205BINDING SITE FOR RESIDUE MPO A 109
2AC2SOFTWAREARG A:53 , TYR A:83 , GLY A:84 , SER A:85 , ARG A:86BINDING SITE FOR RESIDUE SO4 A 110

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3UQI)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3UQI)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3UQI)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3UQI)

(-) Exons   (0, 0)

(no "Exon" information available for 3UQI)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:108
 aligned with Q1HR83_AEDAE | Q1HR83 from UniProtKB/TrEMBL  Length:108

    Alignment length:108
                                    10        20        30        40        50        60        70        80        90       100        
         Q1HR83_AEDAE     1 MGVQVVTLAAGDEATYPKAGQVAVVHYTGTLADGKVFDSSRTRGKPFRFTVGRGEVIRGWDEGVAQMSVGQRAKLVCSPDYAYGSRGHPGVIPPNATLTFDVELLRVE 108
               SCOP domains d3uqia_ A: automated matches                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeee............eeeeeeeee.....eeeehhhhh..eeee......hhhhhhhhh......eeeeee.hhhh...............eeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------ Transcript
                 3uqi A   1 MGVQVVTLAAGDEATYPKAGQVAVVHYTGTLADGKVFDSSRTRGKPFRFTVGRGEVIRGWDEGVAQMSVGQRAKLVCSPDYAYGSRGHPGVIPPNATLTFDVELLRVE 108
                                    10        20        30        40        50        60        70        80        90       100
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3UQI)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3UQI)

(-) Gene Ontology  (4, 4)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (Q1HR83_AEDAE | Q1HR83)
molecular function
    GO:0016853    isomerase activity    Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
    GO:0003755    peptidyl-prolyl cis-trans isomerase activity    Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
biological process
    GO:0006457    protein folding    The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
    GO:0000413    protein peptidyl-prolyl isomerization    The modification of a protein by cis-trans isomerization of a proline residue.

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