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(-) Description

Title :  SOLUTION STRUCTURE OF FKBP12 FROM AEDES AEGYPTI
 
Authors :  G. Chakraborty, J. Shin
Date :  20 Feb 12  (Deposition) - 06 Feb 13  (Release) - 06 Feb 13  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Fkbp12, Isomerase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  G. Chakraborty, J. Shin, Q. T. Nguyen, A. Harikishore, K. Baek, H. S. Yoon
Solution Structure Of Fk506-Binding Protein 12 From Aedes Aegypti.
Proteins V. 80 2476 2012
PubMed-ID: 22806993  |  Reference-DOI: 10.1002/PROT.24146

(-) Compounds

Molecule 1 - FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector: PET-SUMO
    Expression System Vector Type: VECTOR
    Gene: AAEL007883, AAEL_AAEL007883
    Organism Common: YELLOWFEVER MOSQUITO
    Organism Scientific: AEDES AEGYPTI
    Organism Taxid: 7159
    Synonym: FK506-BINDING PROTEIN

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:108
 aligned with Q1HR83_AEDAE | Q1HR83 from UniProtKB/TrEMBL  Length:108

    Alignment length:108
                                    10        20        30        40        50        60        70        80        90       100        
         Q1HR83_AEDAE     1 MGVQVVTLAAGDEATYPKAGQVAVVHYTGTLADGKVFDSSRTRGKPFRFTVGRGEVIRGWDEGVAQMSVGQRAKLVCSPDYAYGSRGHPGVIPPNATLTFDVELLRVE 108
               SCOP domains d2lpva_ A: automated matches                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeee............eeeeeeeee.....eeee.hhhh..eeee......hhhhhhhhhh.....eeeeee.hhhh...............eeeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------ Transcript
                 2lpv A   1 MGVQVVTLAAGDEATYPKAGQVAVVHYTGTLADGKVFDSSRTRGKPFRFTVGRGEVIRGWDEGVAQMSVGQRAKLVCSPDYAYGSRGHPGVIPPNATLTFDVELLRVE 108
                                    10        20        30        40        50        60        70        80        90       100
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (4, 4)

NMR Structure(hide GO term definitions)
Chain A   (Q1HR83_AEDAE | Q1HR83)
molecular function
    GO:0016853    isomerase activity    Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
    GO:0003755    peptidyl-prolyl cis-trans isomerase activity    Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
biological process
    GO:0006457    protein folding    The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
    GO:0000413    protein peptidyl-prolyl isomerization    The modification of a protein by cis-trans isomerization of a proline residue.

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        Q1HR83_AEDAE | Q1HR83: 3uqi

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