3TD4 - JenaLib

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Biological Unit 1 (Jmol Viewer)

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Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF OMPA-LIKE DOMAIN FROM ACINETOBACTER BAUMANNII IN COMPLEX WITH DIAMINOPIMELATE

Authors :   J. S. Park, W. C. Lee, J. H. Song, H. Y. Kim

Date :   10 Aug 11 (Deposition) - 26 Oct 11 (Release) - 26 Jun 13 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.79

Chains :   Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,C  (1x)
Biol. Unit 2: B,D  (1x)
Biol. Unit 3: E,H  (1x)
Biol. Unit 4: F,G  (1x)

Keywords :   Ompa-Like Fold, Cell-Wall Attachment, Peptidoglycan-Binding, Membrane Protein, Peptide Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   J. S. Park, W. C. Lee, K. J. Yeo, K. S. Ryu, M. Kumarasiri, D. Hesek, M. Lee S. Mobashery, J. H. Song, S. I. Kim, J. C. Lee, C. Cheong, Y. H. Jeon, H. Y. Kim
Mechanism Of Anchoring Of Ompa Protein To The Cell Wall Peptidoglycan Of The Gram-Negative Bacterial Outer Membrane
Faseb J. V. 26 219 2012
PubMed-ID: 21965596 | Reference-DOI: 10.1096/FJ.11-188425

Molecule 1 - OUTER MEMBRANE PROTEIN OMP38
	Chains	:	A, B, C, D, E, F, G, H
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Fragment	:	C-TERMINAL DOMAIN
	Gene	:	OMP38
	Organism Scientific	:	ACINETOBACTER BAUMANNII
	Organism Taxid	:	470
	Synonym	:	ABOMPA, OUTER MEMBRANE PROTEIN OMPA, OUTER MEMBRANE PROTEIN OMPAB

		1	2	3	4	5	6	7	8
Asymmetric Unit	:	A	B	C	D	E	F	G	H
Biological Unit 1 (1x)	:	A		C
Biological Unit 2 (1x)	:		B		D
Biological Unit 3 (1x)	:					E			H
Biological Unit 4 (1x)	:						F	G

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (1, 8)

No.	Name	Count	Type	Full Name
1	API	8	Ligand/Ion	2,6-DIAMINOPIMELIC ACID

Biological Unit 1 (1, 2)

No.	Name	Count	Type	Full Name
1	API	2	Ligand/Ion	2,6-DIAMINOPIMELIC ACID

Biological Unit 2 (1, 2)

No.	Name	Count	Type	Full Name
1	API	2	Ligand/Ion	2,6-DIAMINOPIMELIC ACID

Biological Unit 3 (1, 2)

No.	Name	Count	Type	Full Name
1	API	2	Ligand/Ion	2,6-DIAMINOPIMELIC ACID

Biological Unit 4 (1, 2)

No.	Name	Count	Type	Full Name
1	API	2	Ligand/Ion	2,6-DIAMINOPIMELIC ACID

Asymmetric Unit (8, 8)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	THR A:236 , ASN A:237 , THR A:270 , ASP A:271 , THR A:273 , GLY A:274 , LEU A:278 , ASN A:279 , LEU A:282 , ARG A:286 , ARG A:329 , HOH A:355 , HOH E:446	BINDING SITE FOR RESIDUE API A 401
2	AC2	SOFTWARE	THR B:236 , ASN B:237 , THR B:270 , ASP B:271 , THR B:273 , GLY B:274 , ASN B:279 , LEU B:282 , ARG B:286 , ARG B:329	BINDING SITE FOR RESIDUE API B 401
3	AC3	SOFTWARE	THR C:236 , ASN C:237 , THR C:270 , ASP C:271 , THR C:273 , GLY C:274 , ASN C:279 , LEU C:282 , ARG C:286 , ARG C:329	BINDING SITE FOR RESIDUE API C 401
4	AC4	SOFTWARE	THR D:236 , ASN D:237 , THR D:270 , ASP D:271 , THR D:273 , GLY D:274 , ASN D:279 , LEU D:282 , ARG D:286 , ARG D:329	BINDING SITE FOR RESIDUE API D 401
5	AC5	SOFTWARE	THR E:236 , ASN E:237 , THR E:270 , ASP E:271 , THR E:273 , GLY E:274 , ASN E:279 , LEU E:282 , ARG E:286 , ARG E:329	BINDING SITE FOR RESIDUE API E 401
6	AC6	SOFTWARE	THR F:236 , ASN F:237 , THR F:270 , ASP F:271 , THR F:273 , GLY F:274 , ASN F:279 , LEU F:282 , ARG F:286 , ARG F:329 , HOH F:386	BINDING SITE FOR RESIDUE API F 401
7	AC7	SOFTWARE	THR G:236 , ASN G:237 , THR G:270 , ASP G:271 , THR G:273 , GLY G:274 , ASN G:279 , LEU G:282 , ARG G:286 , ARG G:329 , HOH G:421	BINDING SITE FOR RESIDUE API G 401
8	AC8	SOFTWARE	THR H:236 , ASN H:237 , THR H:270 , ASP H:271 , THR H:273 , GLY H:274 , ASN H:279 , LEU H:282 , ARG H:286 , ARG H:329 , HOH H:674	BINDING SITE FOR RESIDUE API H 401

(no "SS Bond" information available for 3TD4)

(no "Cis Peptide Bond" information available for 3TD4)

(no "SAP(SNP)/Variant" information available for 3TD4)

Asymmetric Unit (1, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	OMPA_2	PS51123	OmpA-like domain profile.	OMP38_ACIBA	221-339	8	A:221-339 B:221-339 C:221-339 D:221-339 E:221-339 F:221-339 G:221-339 H:221-339

Biological Unit 1 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	OMPA_2	PS51123	OmpA-like domain profile.	OMP38_ACIBA	221-339	2	A:221-339 - C:221-339 - - - - -

Biological Unit 2 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	OMPA_2	PS51123	OmpA-like domain profile.	OMP38_ACIBA	221-339	2	- B:221-339 - D:221-339 - - - -

Biological Unit 3 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	OMPA_2	PS51123	OmpA-like domain profile.	OMP38_ACIBA	221-339	2	- - - - E:221-339 - - H:221-339

Biological Unit 4 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	OMPA_2	PS51123	OmpA-like domain profile.	OMP38_ACIBA	221-339	2	- - - - - F:221-339 G:221-339 -

(no "Exon" information available for 3TD4)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:122
 aligned with OMP38_ACIBA | Q6RYW5 from UniProtKB/Swiss-Prot  Length:356

    Alignment length:122
                                   227       237       247       257       267       277       287       297       307       317       327       337  
          OMP38_ACIBA   218 QPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339
               SCOP domains d3td4a_ A: automated matches                                                                                               SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeeeeee........hhhhhhhhhhhhhhhhhh...eeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeeee...........hhhhhhhhheeeeeeeeee Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---OMPA_2  PDB: A:221-339 UniProt: 221-339                                                                                 PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------- Transcript
                 3td4 A 218 SHMELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339
                                   227       237       247       257       267       277       287       297       307       317       327       337

Chain B from PDB  Type:PROTEIN  Length:123
 aligned with OMP38_ACIBA | Q6RYW5 from UniProtKB/Swiss-Prot  Length:356

    Alignment length:145
                                   204       214       224       234       244       254       264       274       284       294       304       314       324       334     
          OMP38_ACIBA   195 GGHLKPAAPVVEVAPVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339
               SCOP domains d3td                      4b_ B: automated matches                                                                                                SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...e----------------------eeeeeeeeeeeee........hhhhhhhhhhhhhhhhhh...eeeeee......hhhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeeee...........hhhhhhhhheeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------OMPA_2  PDB: B:221-339 UniProt: 221-339                                                                                 PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3td4 B 217 GSHM----------------------ELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339
                               |     -         -      |224       234       244       254       264       274       284       294       304       314       324       334     
                             220                    221

Chain C from PDB  Type:PROTEIN  Length:121
 aligned with OMP38_ACIBA | Q6RYW5 from UniProtKB/Swiss-Prot  Length:356

    Alignment length:121
                                   228       238       248       258       268       278       288       298       308       318       328       338 
          OMP38_ACIBA   219 PQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339
               SCOP domains d3td4c_ C: automated matches                                                                                              SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeee........hhhhhhhhhhhhhhhhhh...eeeeee......hhhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeeee...........hhhhhhhhheeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --OMPA_2  PDB: C:221-339 UniProt: 221-339                                                                                 PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------- Transcript
                 3td4 C 219 HMELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339
                                   228       238       248       258       268       278       288       298       308       318       328       338

Chain D from PDB  Type:PROTEIN  Length:121
 aligned with OMP38_ACIBA | Q6RYW5 from UniProtKB/Swiss-Prot  Length:356

    Alignment length:121
                                   228       238       248       258       268       278       288       298       308       318       328       338 
          OMP38_ACIBA   219 PQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339
               SCOP domains d3td4d_ D: automated matches                                                                                              SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeee........hhhhhhhhhhhhhhhhhh...eeeeee......hhhhhhhhhhhhhhhhhhhhhhh...hhh.eeeee...........hhhhhhhhheeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --OMPA_2  PDB: D:221-339 UniProt: 221-339                                                                                 PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------- Transcript
                 3td4 D 219 HMELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339
                                   228       238       248       258       268       278       288       298       308       318       328       338

Chain E from PDB  Type:PROTEIN  Length:120
 aligned with OMP38_ACIBA | Q6RYW5 from UniProtKB/Swiss-Prot  Length:356

    Alignment length:120
                                   229       239       249       259       269       279       289       299       309       319       329       339
          OMP38_ACIBA   220 QELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339
               SCOP domains d3td4e_ E: automated matches                                                                                             SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeeeeeeeeee........hhhhhhhhhhhhhhhhhh...eeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeeee...........hhhhhhhhheeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -OMPA_2  PDB: E:221-339 UniProt: 221-339                                                                                 PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------ Transcript
                 3td4 E 220 MELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339
                                   229       239       249       259       269       279       289       299       309       319       329       339

Chain F from PDB  Type:PROTEIN  Length:122
 aligned with OMP38_ACIBA | Q6RYW5 from UniProtKB/Swiss-Prot  Length:356

    Alignment length:122
                                   227       237       247       257       267       277       287       297       307       317       327       337  
          OMP38_ACIBA   218 QPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339
               SCOP domains d3td4f_ F: automated matches                                                                                               SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeeeeee........hhhhhhhhhhhhhhhhhh...eeeeee......hhhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeeee...........hhhhhhhhheeeeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---OMPA_2  PDB: F:221-339 UniProt: 221-339                                                                                 PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------- Transcript
                 3td4 F 218 SHMELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339
                                   227       237       247       257       267       277       287       297       307       317       327       337

Chain G from PDB  Type:PROTEIN  Length:122
 aligned with OMP38_ACIBA | Q6RYW5 from UniProtKB/Swiss-Prot  Length:356

    Alignment length:122
                                   227       237       247       257       267       277       287       297       307       317       327       337  
          OMP38_ACIBA   218 QPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339
               SCOP domains d3td4g_ G: automated matches                                                                                               SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeeeeee........hhhhhhhhhhhhhhhhhh...eeeeee......hhhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeeee...........hhhhhhhhheeeeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---OMPA_2  PDB: G:221-339 UniProt: 221-339                                                                                 PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------- Transcript
                 3td4 G 218 SHMELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339
                                   227       237       247       257       267       277       287       297       307       317       327       337

Chain H from PDB  Type:PROTEIN  Length:121
 aligned with OMP38_ACIBA | Q6RYW5 from UniProtKB/Swiss-Prot  Length:356

    Alignment length:121
                                   228       238       248       258       268       278       288       298       308       318       328       338 
          OMP38_ACIBA   219 PQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339
               SCOP domains d3td4h_ H: automated matches                                                                                              SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeeee........hhhhhhhhhhhhhhhhhh...eeeeee......hhhhhhhhhhhhhhhhhhhhhhh...hhh.eeeee...........hhhhhhhhheeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --OMPA_2  PDB: H:221-339 UniProt: 221-339                                                                                 PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------- Transcript
                 3td4 H 219 HMELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAMNRRVFATITGSR 339
                                   228       238       248       258       268       278       288       298       308       318       328       338

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a+b) (23004)

Fold: Bacillus chorismate mutase-like (324)

Superfamily: OmpA-like (17)

Family: automated matches (11)

Protein domain: automated matches (11)

Acinetobacter baumannii [TaxId: 470] (5)

1a	d3td4a_	A:
1b	d3td4b_	B:
1c	d3td4c_	C:
1d	d3td4d_	D:
1e	d3td4e_	E:
1f	d3td4f_	F:
1g	d3td4g_	G:
1h	d3td4h_	H:

(no "CATH Domain" information available for 3TD4)

(no "Pfam Domain" information available for 3TD4)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F,G,H (OMP38_ACIBA | Q6RYW5)

molecular function
	GO:0015288	porin activity	Catalysis of the transfer of substances, sized less than 1000 Da, from one side of the membrane to the other. The transmembrane portions of porins consist exclusively of beta-strands which form a beta-barrel. They are found in the outer membranes of Gram-negative bacteria, mitochondria, plastids and possibly acid-fast Gram-positive bacteria.
biological process
	GO:0006811	ion transport	The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
	GO:0055085	transmembrane transport	The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other
	GO:0006810	transport	The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
	GO:0009279	cell outer membrane	A lipid bilayer that forms the outermost membrane of the cell envelope; enriched in polysaccharide and protein; the outer leaflet of the membrane contains specific lipopolysaccharide structures.
	GO:0016021	integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0046930	pore complex	Any small opening in a membrane that allows the passage of gases and/or liquids.

Asymmetric Unit
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(no "Cis Peptide Bonds" information available for 3td4)

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	3td4
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	OMP38_ACIBA \| Q6RYW5	:	3td3 3td5 4g4y 4g4z 4g88

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 8)

Sites (8, 8)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 8)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 8)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (8, 8)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File