Chain A from PDB Type:PROTEIN Length:117
aligned with Q12QS6_SHEDO | Q12QS6 from UniProtKB/TrEMBL Length:172
Alignment length:117
55 65 75 85 95 105 115 125 135 145 155
Q12QS6_SHEDO 46 ELTAMSAWVNQDGSTLYINSINAQGELTGSYINRAAGFACQNSPYPVNGWVFGTAISFSTKWLNSVESCNSITSWSGFYINTGGQGKISTLWQLVVNGSSSPSQILKGQDVFSQTSA 162
SCOP domains d3szia_ A: automated matches SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......eeee....eeeeeee....eeeeeee............eeeeeeee..eeeeeeeee....eeeeeeeeeeeeee....eeeeeeeeeee....hhhhheeeeeeeeee.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------- Transcript
3szi A 6 ELTAMSAWVNQDGSTLYINSINAQGELTGSYINRAAGFACQNSPYPVNGWVFGTAISFSTKWLNSVESCNSITSWSGFYINTGGQGKISTLWQLVVNGSSSPSQILKGQDVFSQTSA 122
15 25 35 45 55 65 75 85 95 105 115
Chain B from PDB Type:PROTEIN Length:113
aligned with Q12QS6_SHEDO | Q12QS6 from UniProtKB/TrEMBL Length:172
Alignment length:114
56 66 76 86 96 106 116 126 136 146 156
Q12QS6_SHEDO 47 LTAMSAWVNQDGSTLYINSINAQGELTGSYINRAAGFACQNSPYPVNGWVFGTAISFSTKWLNSVESCNSITSWSGFYINTGGQGKISTLWQLVVNGSSSPSQILKGQDVFSQT 160
SCOP domains d3szib_ B: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ....eeeee....eeeeeee....eeeeeee....-......eeeeeeeee..eeeeeeeee....eeeeeeeeeeeeeee..eeeeeeeeeeee....hhhhheeeeeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------ Transcript
3szi B 7 LTAMSAWVNQDGSTLYINSINAQGELTGSYINRAA-FACQNSPYPVNGWVFGTAISFSTKWLNSVESCNSITSWSGFYINTGGQGKISTLWQLVVNGSSSPSQILKGQDVFSQT 120
16 26 36 | | 46 56 66 76 86 96 106 116
41 |
43
Chain C from PDB Type:PROTEIN Length:117
aligned with Q12QS6_SHEDO | Q12QS6 from UniProtKB/TrEMBL Length:172
Alignment length:117
53 63 73 83 93 103 113 123 133 143 153
Q12QS6_SHEDO 44 AQELTAMSAWVNQDGSTLYINSINAQGELTGSYINRAAGFACQNSPYPVNGWVFGTAISFSTKWLNSVESCNSITSWSGFYINTGGQGKISTLWQLVVNGSSSPSQILKGQDVFSQT 160
SCOP domains d3szic_ C: automated matches SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........eee.....eeeeeee....eeeeeee............eeeeeeee..eeeeeeeee....eeeeeeeeeeeeeee..eeeeeeeeeeee....hhhhheeeeeeeeee Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------- Transcript
3szi C 4 AQELTAMSAWVNQDGSTLYINSINAQGELTGSYINRAAGFACQNSPYPVNGWVFGTAISFSTKWLNSVESCNSITSWSGFYINTGGQGKISTLWQLVVNGSSSPSQILKGQDVFSQT 120
13 23 33 43 53 63 73 83 93 103 113
Chain D from PDB Type:PROTEIN Length:120
aligned with Q12QS6_SHEDO | Q12QS6 from UniProtKB/TrEMBL Length:172
Alignment length:120
51 61 71 81 91 101 111 121 131 141 151 161
Q12QS6_SHEDO 42 LMAQELTAMSAWVNQDGSTLYINSINAQGELTGSYINRAAGFACQNSPYPVNGWVFGTAISFSTKWLNSVESCNSITSWSGFYINTGGQGKISTLWQLVVNGSSSPSQILKGQDVFSQTS 161
SCOP domains d3szid_ D: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .........eeeee....eeeeeee....eeeeeee...........eeeeeeeee..eeeeeeeee....eeeeeeeeeeeeeee..eeeeeeeeeeee....hhhhheeeeeeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------ Transcript
3szi D 2 AMAQELTAMSAWVNQDGSTLYINSINAQGELTGSYINRAAGFACQNSPYPVNGWVFGTAISFSTKWLNSVESCNSITSWSGFYINTGGQGKISTLWQLVVNGSSSPSQILKGQDVFSQTS 121
11 21 31 41 51 61 71 81 91 101 111 121
Chain E from PDB Type:PROTEIN Length:118
aligned with Q12QS6_SHEDO | Q12QS6 from UniProtKB/TrEMBL Length:172
Alignment length:118
53 63 73 83 93 103 113 123 133 143 153
Q12QS6_SHEDO 44 AQELTAMSAWVNQDGSTLYINSINAQGELTGSYINRAAGFACQNSPYPVNGWVFGTAISFSTKWLNSVESCNSITSWSGFYINTGGQGKISTLWQLVVNGSSSPSQILKGQDVFSQTS 161
SCOP domains d3szie_ E: automated matches SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........eee.....eeeeeee....eeeeeee...........eeeeeeeee..eeeeeeeee....eeeeeeeeeeeeehhhhh.eeeeeeeeee....hhhhheeeeeeeee.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------- Transcript
3szi E 4 AQELTAMSAWVNQDGSTLYINSINAQGELTGSYINRAAGFACQNSPYPVNGWVFGTAISFSTKWLNSVESCNSITSWSGFYINTGGQGKISTLWQLVVNGSSSPSQILKGQDVFSQTS 121
13 23 33 43 53 63 73 83 93 103 113
Chain F from PDB Type:PROTEIN Length:117
aligned with Q12QS6_SHEDO | Q12QS6 from UniProtKB/TrEMBL Length:172
Alignment length:118
54 64 74 84 94 104 114 124 134 144 154
Q12QS6_SHEDO 45 QELTAMSAWVNQDGSTLYINSINAQGELTGSYINRAAGFACQNSPYPVNGWVFGTAISFSTKWLNSVESCNSITSWSGFYINTGGQGKISTLWQLVVNGSSSPSQILKGQDVFSQTSA 162
SCOP domains d3szif_ F: automated matches SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ......eeee.....eeeeeee....eeeeeee...........eeeeeeeee..eeeeeeeee....eeeeeeeeeeeeee.-..eeeeeeeeeee....hhhhheeeeeeeeee.. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------- Transcript
3szi F 5 QELTAMSAWVNQDGSTLYINSINAQGELTGSYINRAAGFACQNSPYPVNGWVFGTAISFSTKWLNSVESCNSITSWSGFYINT-GQGKISTLWQLVVNGSSSPSQILKGQDVFSQTSA 122
14 24 34 44 54 64 74 84 | | 94 104 114
87 |
89
Chain G from PDB Type:PROTEIN Length:119
aligned with Q12QS6_SHEDO | Q12QS6 from UniProtKB/TrEMBL Length:172
Alignment length:119
51 61 71 81 91 101 111 121 131 141 151
Q12QS6_SHEDO 42 LMAQELTAMSAWVNQDGSTLYINSINAQGELTGSYINRAAGFACQNSPYPVNGWVFGTAISFSTKWLNSVESCNSITSWSGFYINTGGQGKISTLWQLVVNGSSSPSQILKGQDVFSQT 160
SCOP domains d3szig_ G: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .........eeeee....eeeeeee....eeeeeee...........eeeeeeeee..eeeeeeeee....eeeeeeeeeeeeeee..eeeeeeeeeeee....hhhhheeeeeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
3szi G 2 AMAQELTAMSAWVNQDGSTLYINSINAQGELTGSYINRAAGFACQNSPYPVNGWVFGTAISFSTKWLNSVESCNSITSWSGFYINTGGQGKISTLWQLVVNGSSSPSQILKGQDVFSQT 120
11 21 31 41 51 61 71 81 91 101 111
Chain H from PDB Type:PROTEIN Length:117
aligned with Q12QS6_SHEDO | Q12QS6 from UniProtKB/TrEMBL Length:172
Alignment length:117
53 63 73 83 93 103 113 123 133 143 153
Q12QS6_SHEDO 44 AQELTAMSAWVNQDGSTLYINSINAQGELTGSYINRAAGFACQNSPYPVNGWVFGTAISFSTKWLNSVESCNSITSWSGFYINTGGQGKISTLWQLVVNGSSSPSQILKGQDVFSQT 160
SCOP domains d3szih_ H: automated matches SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......eeee.....eeeeeee....eeeeeee...........eeeeeeeee..eeeeeeeee....eeeeeeeeeeeeeee..eeeeeeeeeeee....hhhhheeeeeeeeee Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------- Transcript
3szi H 4 AQELTAMSAWVNQDGSTLYINSINAQGELTGSYINRAAGFACQNSPYPVNGWVFGTAISFSTKWLNSVESCNSITSWSGFYINTGGQGKISTLWQLVVNGSSSPSQILKGQDVFSQT 120
13 23 33 43 53 63 73 83 93 103 113
Chain I from PDB Type:PROTEIN Length:117
aligned with Q12QS6_SHEDO | Q12QS6 from UniProtKB/TrEMBL Length:172
Alignment length:117
53 63 73 83 93 103 113 123 133 143 153
Q12QS6_SHEDO 44 AQELTAMSAWVNQDGSTLYINSINAQGELTGSYINRAAGFACQNSPYPVNGWVFGTAISFSTKWLNSVESCNSITSWSGFYINTGGQGKISTLWQLVVNGSSSPSQILKGQDVFSQT 160
SCOP domains d3szii_ I: automated matches SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........eeee....eeeeeee....eeeeeee............eeeeeeee..eeeeeeeee....eeeeeeeeeeeeehhhhh.eeeeeeeeee....hhhhheeeeeeeee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------- Transcript
3szi I 4 AQELTAMSAWVNQDGSTLYINSINAQGELTGSYINRAAGFACQNSPYPVNGWVFGTAISFSTKWLNSVESCNSITSWSGFYINTGGQGKISTLWQLVVNGSSSPSQILKGQDVFSQT 120
13 23 33 43 53 63 73 83 93 103 113
Chain J from PDB Type:PROTEIN Length:119
aligned with Q12QS6_SHEDO | Q12QS6 from UniProtKB/TrEMBL Length:172
Alignment length:119
51 61 71 81 91 101 111 121 131 141 151
Q12QS6_SHEDO 42 LMAQELTAMSAWVNQDGSTLYINSINAQGELTGSYINRAAGFACQNSPYPVNGWVFGTAISFSTKWLNSVESCNSITSWSGFYINTGGQGKISTLWQLVVNGSSSPSQILKGQDVFSQT 160
SCOP domains d3szij_ J: automated matches SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .........eeeee....eeeeeee....eeeeeee...........eeeeeeeee..eeeeeeeee....eeeeeeeeeeeeeee..eeeeeeeeeeee....hhhhheeeeeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
3szi J 2 AMAQELTAMSAWVNQDGSTLYINSINAQGELTGSYINRAAGFACQNSPYPVNGWVFGTAISFSTKWLNSVESCNSITSWSGFYINTGGQGKISTLWQLVVNGSSSPSQILKGQDVFSQT 120
11 21 31 41 51 61 71 81 91 101 111
Chain K from PDB Type:PROTEIN Length:117
aligned with Q12QS6_SHEDO | Q12QS6 from UniProtKB/TrEMBL Length:172
Alignment length:118
52 62 72 82 92 102 112 122 132 142 152
Q12QS6_SHEDO 43 MAQELTAMSAWVNQDGSTLYINSINAQGELTGSYINRAAGFACQNSPYPVNGWVFGTAISFSTKWLNSVESCNSITSWSGFYINTGGQGKISTLWQLVVNGSSSPSQILKGQDVFSQT 160
SCOP domains d3szik_ K: automated matches SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .........eeee....eeeeeee....eeeeeee....-......eeeeeeeee..eeeeeeeee....eeeeeeeeeeeeeee..eeeeeeeeeeee....hhhhheeeeeeeeee Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------- Transcript
3szi K 3 MAQELTAMSAWVNQDGSTLYINSINAQGELTGSYINRAA-FACQNSPYPVNGWVFGTAISFSTKWLNSVESCNSITSWSGFYINTGGQGKISTLWQLVVNGSSSPSQILKGQDVFSQT 120
12 22 32 |-| 52 62 72 82 92 102 112
41 |
43
Chain L from PDB Type:PROTEIN Length:120
aligned with Q12QS6_SHEDO | Q12QS6 from UniProtKB/TrEMBL Length:172
Alignment length:120
52 62 72 82 92 102 112 122 132 142 152 162
Q12QS6_SHEDO 43 MAQELTAMSAWVNQDGSTLYINSINAQGELTGSYINRAAGFACQNSPYPVNGWVFGTAISFSTKWLNSVESCNSITSWSGFYINTGGQGKISTLWQLVVNGSSSPSQILKGQDVFSQTSA 162
SCOP domains d3szil_ L: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author .........eeee....eeeeeee....eeeeeee............eeeeeeee..eeeeeeeee....eeeeeeeeeeeeeee..eeeeeeeeeeee....hhhhheeeeeeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------ Transcript
3szi L 3 MAQELTAMSAWVNQDGSTLYINSINAQGELTGSYINRAAGFACQNSPYPVNGWVFGTAISFSTKWLNSVESCNSITSWSGFYINTGGQGKISTLWQLVVNGSSSPSQILKGQDVFSQTSA 122
12 22 32 42 52 62 72 82 92 102 112 122
Legend: |
|
→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |