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(-) Description

Title :  CRYSTAL STRUCTURE OF APO-HEXAMERIC ACYL-COA THIOESTERASE
 
Authors :  J. K. Forwood, M. Marfori, B. Kobe
Date :  03 Jul 11  (Deposition) - 17 Aug 11  (Release) - 17 Aug 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.90
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F
Keywords :  Hotdog, Thioesterase, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. K. Forwood, M. Marfori, B. Kobe
Ligand-Induced Conformational Changes Within A Hexameric Acyl-Coa Thioesterase
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - ACYL-COA HYDROLASE
    ChainsA, B, C, D, E, F
    EC Number3.1.2.-
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPBAD/HIS
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneBH0798
    Organism ScientificBACILLUS HALODURANS
    Organism Taxid272558
    StrainC-125

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 3SPS)

(-) Sites  (0, 0)

(no "Site" information available for 3SPS)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3SPS)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3SPS)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3SPS)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3SPS)

(-) Exons   (0, 0)

(no "Exon" information available for 3SPS)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:156
 aligned with Q9KEQ1_BACHD | Q9KEQ1 from UniProtKB/TrEMBL  Length:157

    Alignment length:156
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151      
         Q9KEQ1_BACHD     2 IQSYPVERSRTIQTRLVLPPDTNHLGTIFGGKVLAYIDEIAALTAMKHANSAVVTASIDSVDFKSSATVGDALELEGFVTHTGRTSMEVYVRVHSNNLLTGERTLTTESFLTMVAVDESGKPKPVPQVEPQTEEEKRLYETAPARKENRKKRAALR 157
               SCOP domains d3spsa_ A: Acyl-CoA hydrolase BH0798                                                                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeehhhhheeeeee.hhhhh......hhhhhhhhhhhhhhhhhhhhhh.eeeeeeeeeeee........eeeeeeeeeee...eeeeeeeeeeee....eeeeeeeeeeeeeee..........eee..hhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3sps A   2 IQSYPVERSRTIQTRLVLPPDTNHLGTIFGGKVLAYIDEIAALTAMKHANSAVVTASIDSVDFKSSATVGDALELEGFVTHTGRTSMEVYVRVHSNNLLTGERTLTTESFLTMVAVDESGKPKPVPQVEPQTEEEKRLYETAPARKENRKKRAALR 157
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151      

Chain B from PDB  Type:PROTEIN  Length:156
 aligned with Q9KEQ1_BACHD | Q9KEQ1 from UniProtKB/TrEMBL  Length:157

    Alignment length:156
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151      
         Q9KEQ1_BACHD     2 IQSYPVERSRTIQTRLVLPPDTNHLGTIFGGKVLAYIDEIAALTAMKHANSAVVTASIDSVDFKSSATVGDALELEGFVTHTGRTSMEVYVRVHSNNLLTGERTLTTESFLTMVAVDESGKPKPVPQVEPQTEEEKRLYETAPARKENRKKRAALR 157
               SCOP domains d3spsb_ B: Acyl-CoA hydrolase BH0798                                                                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeehhhhheeeeee.hhhhh......hhhhhhhhhhhhhhhhhhhhhh.eeeeeeeeeeee........eeeeeeeeeee...eeeeeeeeeee......eeeeeeeeeeeeee..........eee..hhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3sps B   2 IQSYPVERSRTIQTRLVLPPDTNHLGTIFGGKVLAYIDEIAALTAMKHANSAVVTASIDSVDFKSSATVGDALELEGFVTHTGRTSMEVYVRVHSNNLLTGERTLTTESFLTMVAVDESGKPKPVPQVEPQTEEEKRLYETAPARKENRKKRAALR 157
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151      

Chain C from PDB  Type:PROTEIN  Length:155
 aligned with Q9KEQ1_BACHD | Q9KEQ1 from UniProtKB/TrEMBL  Length:157

    Alignment length:155
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151     
         Q9KEQ1_BACHD     2 IQSYPVERSRTIQTRLVLPPDTNHLGTIFGGKVLAYIDEIAALTAMKHANSAVVTASIDSVDFKSSATVGDALELEGFVTHTGRTSMEVYVRVHSNNLLTGERTLTTESFLTMVAVDESGKPKPVPQVEPQTEEEKRLYETAPARKENRKKRAAL 156
               SCOP domains d3spsc_ C: Acyl-CoA hydrolase BH0798                                                                                                                        SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeehhhhheeeeee.hhhhh......hhhhhhhhhhhhhhhhhhhhhh.eeeeeeeeeeee........eeeeeeeeeee...eeeeeeeeeee......eeeeeeeeeeeeee..........eee..hhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3sps C   2 IQSYPVERSRTIQTRLVLPPDTNHLGTIFGGKVLAYIDEIAALTAMKHANSAVVTASIDSVDFKSSATVGDALELEGFVTHTGRTSMEVYVRVHSNNLLTGERTLTTESFLTMVAVDESGKPKPVPQVEPQTEEEKRLYETAPARKENRKKRAAL 156
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151     

Chain D from PDB  Type:PROTEIN  Length:155
 aligned with Q9KEQ1_BACHD | Q9KEQ1 from UniProtKB/TrEMBL  Length:157

    Alignment length:155
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151     
         Q9KEQ1_BACHD     2 IQSYPVERSRTIQTRLVLPPDTNHLGTIFGGKVLAYIDEIAALTAMKHANSAVVTASIDSVDFKSSATVGDALELEGFVTHTGRTSMEVYVRVHSNNLLTGERTLTTESFLTMVAVDESGKPKPVPQVEPQTEEEKRLYETAPARKENRKKRAAL 156
               SCOP domains d3spsd_ D: Acyl-CoA hydrolase BH0798                                                                                                                        SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee.hhh.eeeeee.hhhhh......hhhhhhhhhhhhhhhhhhhhhh.eeeeeeeeeeee........eeeeeeeeeee...eeeeeeeeeee......eeeeeeeeeeeeee..........eee..hhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3sps D   2 IQSYPVERSRTIQTRLVLPPDTNHLGTIFGGKVLAYIDEIAALTAMKHANSAVVTASIDSVDFKSSATVGDALELEGFVTHTGRTSMEVYVRVHSNNLLTGERTLTTESFLTMVAVDESGKPKPVPQVEPQTEEEKRLYETAPARKENRKKRAAL 156
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151     

Chain E from PDB  Type:PROTEIN  Length:156
 aligned with Q9KEQ1_BACHD | Q9KEQ1 from UniProtKB/TrEMBL  Length:157

    Alignment length:156
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151      
         Q9KEQ1_BACHD     2 IQSYPVERSRTIQTRLVLPPDTNHLGTIFGGKVLAYIDEIAALTAMKHANSAVVTASIDSVDFKSSATVGDALELEGFVTHTGRTSMEVYVRVHSNNLLTGERTLTTESFLTMVAVDESGKPKPVPQVEPQTEEEKRLYETAPARKENRKKRAALR 157
               SCOP domains d3spse_ E: Acyl-CoA hydrolase BH0798                                                                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeehhhhheeeeee.hhhhh......hhhhhhhhhhhhhhhhhhhhhh.eeeeeeeeeeee........eeeeeeeeeee...eeeeeeeeeeee....eeeeeeeeeeeeeee..........eee..hhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3sps E   2 IQSYPVERSRTIQTRLVLPPDTNHLGTIFGGKVLAYIDEIAALTAMKHANSAVVTASIDSVDFKSSATVGDALELEGFVTHTGRTSMEVYVRVHSNNLLTGERTLTTESFLTMVAVDESGKPKPVPQVEPQTEEEKRLYETAPARKENRKKRAALR 157
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151      

Chain F from PDB  Type:PROTEIN  Length:155
 aligned with Q9KEQ1_BACHD | Q9KEQ1 from UniProtKB/TrEMBL  Length:157

    Alignment length:155
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151     
         Q9KEQ1_BACHD     2 IQSYPVERSRTIQTRLVLPPDTNHLGTIFGGKVLAYIDEIAALTAMKHANSAVVTASIDSVDFKSSATVGDALELEGFVTHTGRTSMEVYVRVHSNNLLTGERTLTTESFLTMVAVDESGKPKPVPQVEPQTEEEKRLYETAPARKENRKKRAAL 156
               SCOP domains d3spsf_ F: Acyl-CoA hydrolase BH0798                                                                                                                        SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeehhhhheeeeee.hhhhh......hhhhhhhhhhhhhhhhhhhhhh..eeeeeeeeeee........eeeeeeeeeee...eeeeeeeeeee......eeeeeeeeeeeee...........eee..hhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3sps F   2 IQSYPVERSRTIQTRLVLPPDTNHLGTIFGGKVLAYIDEIAALTAMKHANSAVVTASIDSVDFKSSATVGDALELEGFVTHTGRTSMEVYVRVHSNNLLTGERTLTTESFLTMVAVDESGKPKPVPQVEPQTEEEKRLYETAPARKENRKKRAAL 156
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151     

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 6)

Asymmetric/Biological Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3SPS)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3SPS)

(-) Gene Ontology  (1, 1)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (Q9KEQ1_BACHD | Q9KEQ1)
molecular function
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q9KEQ1_BACHD | Q9KEQ11vpm

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