Chain A from PDB Type:PROTEIN Length:244
aligned with O54157_STRCO | O54157 from UniProtKB/TrEMBL Length:280
Alignment length:253
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228 238 248 258
O54157_STRCO 9 QRSAWFPRPVAAPAAEPPDPAAAPLRLVCFPYAGGTVSAFRGWQERLGDEVAVVPVQLPGRGLRLRERPYDTMEPLAEAVADALEEHRLTHDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDRRLPVLRADLRACERYDWHPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTTGSFLRRHLPGNHFFLNGGPSRDRLLAHLGTEL 261
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhh..................eeeeee.....hhhhhhhhhhhhh..eeeee.....hhhhh......hhhhhhhhhhhhhhhh.....eeeeeehhhhhhhhhhhhhhhhh.......eeee...hhhhh...hhhhhhhhhhhhhhhhhh...---------...hhhhhhhhhhhhhh............eeeeeeee....hhhhhhhhhhhh...eeeeeeeee.hhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3qmv A 9 QRSAWFPRPVAAPAAEPPDPAAAPLRLVCFPYAGGTVSAFRGWQERLGDEVAVVPVQLPGRGLRLRERPYDTmEPLAEAVADALEEHRLTHDYALFGHSmGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLD---------FDRRLPVLRADLRACERYDWHPRPPLDCPTTAFSAAADPIATPEmVEAWRPYTTGSFLRRHLPGNHFFLNGGPSRDRLLAHLGTEL 261
18 28 38 48 58 68 78 | 88 98 108 118 128 138 148 158 | - 178 188 198 208 218 | 228 238 248 258
81-MSE 108-MSE 166 176 220-MSE
Chain B from PDB Type:PROTEIN Length:254
aligned with O54157_STRCO | O54157 from UniProtKB/TrEMBL Length:280
Alignment length:254
17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217 227 237 247 257
O54157_STRCO 8 SQRSAWFPRPVAAPAAEPPDPAAAPLRLVCFPYAGGTVSAFRGWQERLGDEVAVVPVQLPGRGLRLRERPYDTMEPLAEAVADALEEHRLTHDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDRRLPVLRADLRACERYDWHPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTTGSFLRRHLPGNHFFLNGGPSRDRLLAHLGTEL 261
SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhh...................eeeee.....hhhhhhhhhhhhh...eeee.....hhhhh......hhhhhhhhhhhhhhhh.....eeeeeehhhhhhhhhhhhhhhhh.......eeee...hhhhh...hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhh............eeeeeeee....hhhhhhhhhhhh...eeeeeeeee.hhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3qmv B 8 SQRSAWFPRPVAAPAAEPPDPAAAPLRLVCFPYAGGTVSAFRGWQERLGDEVAVVPVQLPGRGLRLRERPYDTmEPLAEAVADALEEHRLTHDYALFGHSmGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDRRLPVLRADLRACERYDWHPRPPLDCPTTAFSAAADPIATPEmVEAWRPYTTGSFLRRHLPGNHFFLNGGPSRDRLLAHLGTEL 261
17 27 37 47 57 67 77 | 87 97 107| 117 127 137 147 157 167 177 187 197 207 217 | 227 237 247 257
81-MSE 108-MSE 220-MSE
Chain C from PDB Type:PROTEIN Length:268
aligned with O54157_STRCO | O54157 from UniProtKB/TrEMBL Length:280
Alignment length:269
1
|2 12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252
O54157_STRCO - --------MSPADLLSQRSAWFPRPVAAPAAEPPDPAAAPLRLVCFPYAGGTVSAFRGWQERLGDEVAVVPVQLPGRGLRLRERPYDTMEPLAEAVADALEEHRLTHDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDRRLPVLRADLRACERYDWHPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTTGSFLRRHLPGNHFFLNGGPSRDRLLAHLGTEL 261
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..hhhhh....hhhhhhhhhhh........-.........eeeeee.....hhhhhhhhhhhhh..eeeee.....hhhhh......hhhhhhhhhhhhhhhh.....eeeeeehhhhhhhhhhhhhhhhh.......eeee...hhhhh...hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhh............eeeeee......hhhhhhhhhhhh...eeeeee....hhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3qmv C -7 DLGTENLYFQSNALLSQRSAWFPRPVAAPA-EPPDPAAAPLRLVCFPYAGGTVSAFRGWQERLGDEVAVVPVQLPGRGLRLRERPYDTmEPLAEAVADALEEHRLTHDYALFGHSmGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDRRLPVLRADLRACERYDWHPRPPLDCPTTAFSAAADPIATPEmVEAWRPYTTGSFLRRHLPGNHFFLNGGPSRDRLLAHLGTEL 261
2 12 22 | 32 42 52 62 72 82 92 102 | 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252
22 | 81-MSE 108-MSE 220-MSE
24
Chain D from PDB Type:PROTEIN Length:266
aligned with O54157_STRCO | O54157 from UniProtKB/TrEMBL Length:280
Alignment length:269
1
|2 12 22 32 42 52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252
O54157_STRCO - --------MSPADLLSQRSAWFPRPVAAPAAEPPDPAAAPLRLVCFPYAGGTVSAFRGWQERLGDEVAVVPVQLPGRGLRLRERPYDTMEPLAEAVADALEEHRLTHDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDRRLPVLRADLRACERYDWHPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTTGSFLRRHLPGNHFFLNGGPSRDRLLAHLGTEL 261
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) ----------------------------------------Thioesterase-3qmvD01 D:33-261 Pfam domains (1)
Pfam domains (2) ----------------------------------------Thioesterase-3qmvD02 D:33-261 Pfam domains (2)
Pfam domains (3) ----------------------------------------Thioesterase-3qmvD03 D:33-261 Pfam domains (3)
Pfam domains (4) ----------------------------------------Thioesterase-3qmvD04 D:33-261 Pfam domains (4)
Sec.struct. author ..hhhhh.....hhhhhhhhhh......---.........eeeeee.....hhhhhhhhhhhhh..eeeee.....hhhhh......hhhhhhhhhhhhhhhh.....eeeeeehhhhhhhhhhhhhhhhh.......eeee...hhhhh...hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhh............eeeeee......hhhhhhhhhhhh...eeeeee....hhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3qmv D -7 DLGTENLYFQSNALLSQRSAWFPRPVAA---EPPDPAAAPLRLVCFPYAGGTVSAFRGWQERLGDEVAVVPVQLPGRGLRLRERPYDTmEPLAEAVADALEEHRLTHDYALFGHSmGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDRRLPVLRADLRACERYDWHPRPPLDCPTTAFSAAADPIATPEmVEAWRPYTTGSFLRRHLPGNHFFLNGGPSRDRLLAHLGTEL 261
2 12 | - | 32 42 52 62 72 82 92 102 | 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252
20 24 81-MSE 108-MSE 220-MSE
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |