3QC9 - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF CROSS-LINKED BOVINE GRK1 T8C/N480C DOUBLE MUTANT COMPLEXED WITH ADP AND MG

Authors :   C. -C. Huang, J. J. G. Tesmer

Date :   15 Jan 11 (Deposition) - 16 Feb 11 (Release) - 30 Mar 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.70

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,D  (1x)
Biol. Unit 2: B,C  (1x)

Keywords :   Enkaryotic Protein Kinase Fold, Protein Serine/Threonine Kinase, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   C. C. Huang, T. Orban, B. Jastrzebska, K. Palczewski, J. J. Tesmer
Activation Of G Protein-Coupled Receptor Kinase 1 Involves Interactions Between Its N-Terminal Region And Its Kinase Domain.
Biochemistry V. 50 1940 2011
PubMed-ID: 21265573 | Reference-DOI: 10.1021/BI101606E

Molecule 1 - RHODOPSIN KINASE
	Chains	:	A, B, C, D
	EC Number	:	2.7.11.14
	Engineered	:	YES
	Expression System	:	SPODOPTERA FRUGIPERDA
	Expression System Cell Line	:	HIGH 5
	Expression System Taxid	:	7108
	Fragment	:	UNP RESIDUES 1-535
	Gene	:	GRK1, RHOK
	Mutation	:	YES
	Organism Common	:	BOVINE,COW,DOMESTIC CATTLE,DOMESTIC COW
	Organism Scientific	:	BOS TAURUS
	Organism Taxid	:	9913
	Synonym	:	RK, G PROTEIN-COUPLED RECEPTOR KINASE 1

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A			D
Biological Unit 2 (1x)	:		B	C

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (3, 14)

No.	Name	Count	Type	Full Name
1	ADP	4	Ligand/Ion	ADENOSINE-5'-DIPHOSPHATE
2	GOL	2	Ligand/Ion	GLYCEROL
3	MG	8	Ligand/Ion	MAGNESIUM ION

Biological Unit 1 (2, 3)

No.	Name	Count	Type	Full Name
1	ADP	2	Ligand/Ion	ADENOSINE-5'-DIPHOSPHATE
2	GOL	1	Ligand/Ion	GLYCEROL
3	MG	-1	Ligand/Ion	MAGNESIUM ION

Biological Unit 2 (2, 3)

No.	Name	Count	Type	Full Name
1	ADP	2	Ligand/Ion	ADENOSINE-5'-DIPHOSPHATE
2	GOL	1	Ligand/Ion	GLYCEROL
3	MG	-1	Ligand/Ion	MAGNESIUM ION

Asymmetric Unit (14, 14)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	LEU A:193 , GLY A:194 , ARG A:195 , GLY A:196 , GLY A:197 , VAL A:201 , ALA A:214 , LYS A:216 , MET A:264 , THR A:265 , MET A:267 , LEU A:321 , ASP A:332 , HOH A:545 , HOH A:546 , HOH A:548 , HOH A:550 , MG A:800 , MG A:801	BINDING SITE FOR RESIDUE ADP A 700
02	AC2	SOFTWARE	ASP A:332 , HOH A:545 , HOH A:546 , HOH A:547 , ADP A:700	BINDING SITE FOR RESIDUE MG A 800
03	AC3	SOFTWARE	ASP A:332 , HOH A:548 , HOH A:549 , HOH A:550 , HOH A:551 , ADP A:700	BINDING SITE FOR RESIDUE MG A 801
04	AC4	SOFTWARE	GLY A:199 , GLU A:200 , ASN A:219 , ARG A:222 , ASP A:259	BINDING SITE FOR RESIDUE GOL A 544
05	AC5	SOFTWARE	LEU B:193 , GLY B:194 , ARG B:195 , GLY B:196 , GLY B:197 , VAL B:201 , ALA B:214 , LYS B:216 , MET B:264 , THR B:265 , MET B:267 , LEU B:321 , ASP B:332 , HOH B:545 , HOH B:546 , HOH B:548 , HOH B:550 , MG B:800 , MG B:801	BINDING SITE FOR RESIDUE ADP B 700
06	AC6	SOFTWARE	ASP B:332 , HOH B:545 , HOH B:546 , HOH B:547 , ADP B:700	BINDING SITE FOR RESIDUE MG B 800
07	AC7	SOFTWARE	ASP B:332 , GLY B:334 , HOH B:548 , HOH B:549 , HOH B:550 , HOH B:551 , ADP B:700	BINDING SITE FOR RESIDUE MG B 801
08	AC8	SOFTWARE	SER B:244 , ARG B:329	BINDING SITE FOR RESIDUE GOL B 544
09	AC9	SOFTWARE	HOH B:553 , GLY C:194 , ARG C:195 , GLY C:197 , VAL C:201 , ALA C:214 , LYS C:216 , MET C:264 , THR C:265 , MET C:267 , LEU C:321 , ASP C:332 , HOH C:545 , HOH C:547 , HOH C:549 , MG C:800 , MG C:801	BINDING SITE FOR RESIDUE ADP C 700
10	BC1	SOFTWARE	HOH B:553 , ASP C:332 , HOH C:545 , HOH C:546 , ADP C:700	BINDING SITE FOR RESIDUE MG C 800
11	BC2	SOFTWARE	ASP C:332 , HOH C:547 , HOH C:548 , HOH C:549 , HOH C:550 , ADP C:700	BINDING SITE FOR RESIDUE MG C 801
12	BC3	SOFTWARE	LEU D:193 , GLY D:194 , ARG D:195 , GLY D:197 , VAL D:201 , ALA D:214 , LYS D:216 , MET D:264 , THR D:265 , MET D:267 , LEU D:321 , ASP D:332 , HOH D:544 , HOH D:545 , HOH D:546 , HOH D:547 , HOH D:549 , MG D:800 , MG D:801	BINDING SITE FOR RESIDUE ADP D 700
13	BC4	SOFTWARE	ASP D:332 , HOH D:544 , HOH D:545 , HOH D:546 , ADP D:700	BINDING SITE FOR RESIDUE MG D 800
14	BC5	SOFTWARE	ASP D:332 , HOH D:547 , HOH D:548 , HOH D:549 , HOH D:550 , ADP D:700	BINDING SITE FOR RESIDUE MG D 801

(no "SS Bond" information available for 3QC9)

(no "Cis Peptide Bond" information available for 3QC9)

(no "SAP(SNP)/Variant" information available for 3QC9)

Asymmetric Unit (4, 16)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	RGS	PS50132	RGS domain profile.	RK_BOVIN	63-172	4	A:63-172 B:63-172 C:63-172 D:63-172
2	PROTEIN_KINASE_ATP	PS00107	Protein kinases ATP-binding region signature.	RK_BOVIN	193-216	4	A:193-216 B:193-216 C:193-216 D:193-216
3	PROTEIN_KINASE_ST	PS00108	Serine/Threonine protein kinases active-site signature.	RK_BOVIN	310-322	4	A:310-322 B:310-322 C:310-322 D:310-322
4	AGC_KINASE_CTER	PS51285	AGC-kinase C-terminal domain profile.	RK_BOVIN	453-518	4	A:453-518 B:453-518 C:453-518 D:453-518

Biological Unit 1 (4, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	RGS	PS50132	RGS domain profile.	RK_BOVIN	63-172	2	A:63-172 - - D:63-172
2	PROTEIN_KINASE_ATP	PS00107	Protein kinases ATP-binding region signature.	RK_BOVIN	193-216	2	A:193-216 - - D:193-216
3	PROTEIN_KINASE_ST	PS00108	Serine/Threonine protein kinases active-site signature.	RK_BOVIN	310-322	2	A:310-322 - - D:310-322
4	AGC_KINASE_CTER	PS51285	AGC-kinase C-terminal domain profile.	RK_BOVIN	453-518	2	A:453-518 - - D:453-518

Biological Unit 2 (4, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	RGS	PS50132	RGS domain profile.	RK_BOVIN	63-172	2	- B:63-172 C:63-172 -
2	PROTEIN_KINASE_ATP	PS00107	Protein kinases ATP-binding region signature.	RK_BOVIN	193-216	2	- B:193-216 C:193-216 -
3	PROTEIN_KINASE_ST	PS00108	Serine/Threonine protein kinases active-site signature.	RK_BOVIN	310-322	2	- B:310-322 C:310-322 -
4	AGC_KINASE_CTER	PS51285	AGC-kinase C-terminal domain profile.	RK_BOVIN	453-518	2	- B:453-518 C:453-518 -

Asymmetric Unit (7, 28)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	ENSBTAT00000045068	1	ENSBTAE00000216442	chr12:84918428-84919117	690	RK_BOVIN	1-230	230	4	A:31-230 B:31-230 C:31-230 (gaps) D:31-230	200 200 200 200
1.2	ENSBTAT00000045068	2	ENSBTAE00000413180	chr12:84920231-84920294	64	RK_BOVIN	231-252	22	4	A:231-252 B:231-252 C:231-252 D:231-252	22 22 22 22
1.6a	ENSBTAT00000045068	6a	ENSBTAE00000334122	chr12:84924790-84925011	222	RK_BOVIN	252-326	75	4	A:252-326 B:252-326 C:252-326 D:252-326	75 75 75 75
1.7	ENSBTAT00000045068	7	ENSBTAE00000400759	chr12:84925672-84925755	84	RK_BOVIN	326-354	29	4	A:326-354 B:326-354 C:326-354 D:326-354	29 29 29 29
1.8	ENSBTAT00000045068	8	ENSBTAE00000334116	chr12:84936606-84936730	125	RK_BOVIN	354-395	42	4	A:354-395 B:354-395 C:354-395 D:354-395	42 42 42 42
1.9	ENSBTAT00000045068	9	ENSBTAE00000334112	chr12:84938172-84938373	202	RK_BOVIN	396-463	68	4	A:396-463 B:396-463 C:396-463 D:396-463	68 68 68 68
1.10	ENSBTAT00000045068	10	ENSBTAE00000334107	chr12:84939509-84939807	299	RK_BOVIN	463-561	99	4	A:463-533 (gaps) B:463-533 (gaps) C:463-533 (gaps) D:463-533 (gaps)	71 71 71 71

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:486
 aligned with RK_BOVIN | P28327 from UniProtKB/Swiss-Prot  Length:561

    Alignment length:503
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530   
             RK_BOVIN    31 RDRKYLARLKLPPLSKCEALRESLDLGFEGMCLEQPIGKRLFQQFLRTHEQHGPALQLWKDIEDYDTADDALRPQKAQALRAAYLEPQAQLFCSFLDAETVARARAGAGDGLFQPLLRAVLAHLGQAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRTVYAKNIQDVGAFSTVKGVAFEKADTEFFQEFASGTCPIPWQEEMIETGVFGDLNVWRP 533
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhh.....hhhhhhhhhh....hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhh.eeeeeeeeee..eeeeeeee.....eeeeeeeehhhhhhh.hhhhhhhhhhhhhhh.......eeeeee...eeeeee......hhhhhhhh........hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.....eee......ee..................hhhhhh.....hhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhh........hhhhhhhhhhhh..hhhhh.......hhhhhhhhhhh..hhhhhhh..........-----------------......hhhhhhhhhhhh.eehhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------RGS  PDB: A:63-172 UniProt: 63-172                                                                            --------------------PROTEIN_KINASE_ATP      ---------------------------------------------------------------------------------------------PROTEIN_KINAS----------------------------------------------------------------------------------------------------------------------------------AGC_KINASE_CTER  PDB: A:453-518 UniProt: 453-518                  --------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: A:31-230 UniProt: 1-230 [INCOMPLETE]                                                                                                                                                     Exon 1.2              -------------------------------------------------------------------------Exon 1.7  PDB: A:326-354     ------------------------------------------------------------------------------------------------------------Exon 1.10  PDB: A:463-533 (gaps) UniProt: 463-561 [INCOMPLETE]          Transcript 1 (1)
           Transcript 1 (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.6a  PDB: A:252-326 UniProt: 252-326                                 ---------------------------Exon 1.8  PDB: A:354-395 UniProt: 354-395 Exon 1.9  PDB: A:396-463 UniProt: 396-463                           ---------------------------------------------------------------------- Transcript 1 (2)
                 3qc9 A  31 RDRKYLARLKLPPLSKCEALRESLDLGFEGMCLEQPIGKRLFQQFLRTHEQHGPALQLWKDIEDYDTADDALRPQKAQALRAAYLEPQAQLFCSFLDAETVARARAGAGDGLFQPLLRAVLAHLGQAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPD-----------------VKGVAFEKADTEFFQEFASGTCPIPWQEEMIETGVFGDLNVWRP 533
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470 |       -       490       500       510       520       530   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   472               490

Chain B from PDB  Type:PROTEIN  Length:481
 aligned with RK_BOVIN | P28327 from UniProtKB/Swiss-Prot  Length:561

    Alignment length:503
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530   
             RK_BOVIN    31 RDRKYLARLKLPPLSKCEALRESLDLGFEGMCLEQPIGKRLFQQFLRTHEQHGPALQLWKDIEDYDTADDALRPQKAQALRAAYLEPQAQLFCSFLDAETVARARAGAGDGLFQPLLRAVLAHLGQAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRTVYAKNIQDVGAFSTVKGVAFEKADTEFFQEFASGTCPIPWQEEMIETGVFGDLNVWRP 533
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhh.....hhhhhhhhhh....hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeeeee..eeeeeeee.....eeeeeeeehhhhhhh.hhhhhhhhhhhhhhh.......eeeeee...eeeeee......hhhhhhhh........hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.....eee......ee..................hhhhhh.....hhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhh........hhhhhhhhhhhh..hhhhh.......hhhhhhhhhhh..hhhhhhh..........----------------------.hhhhhhhhhhhh.eehhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------RGS  PDB: B:63-172 UniProt: 63-172                                                                            --------------------PROTEIN_KINASE_ATP      ---------------------------------------------------------------------------------------------PROTEIN_KINAS----------------------------------------------------------------------------------------------------------------------------------AGC_KINASE_CTER  PDB: B:453-518 UniProt: 453-518                  --------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: B:31-230 UniProt: 1-230 [INCOMPLETE]                                                                                                                                                     Exon 1.2              -------------------------------------------------------------------------Exon 1.7  PDB: B:326-354     ------------------------------------------------------------------------------------------------------------Exon 1.10  PDB: B:463-533 (gaps) UniProt: 463-561 [INCOMPLETE]          Transcript 1 (1)
           Transcript 1 (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.6a  PDB: B:252-326 UniProt: 252-326                                 ---------------------------Exon 1.8  PDB: B:354-395 UniProt: 354-395 Exon 1.9  PDB: B:396-463 UniProt: 396-463                           ---------------------------------------------------------------------- Transcript 1 (2)
                 3qc9 B  31 RDRKYLARLKLPPLSKCEALRESLDLGFEGMCLEQPIGKRLFQQFLRTHEQHGPALQLWKDIEDYDTADDALRPQKAQALRAAYLEPQAQLFCSFLDAETVARARAGAGDGLFQPLLRAVLAHLGQAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPD----------------------FEKADTEFFQEFASGTCPIPWQEEMIETGVFGDLNVWRP 533
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470 |       -         -    |  500       510       520       530   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   472                    495

Chain C from PDB  Type:PROTEIN  Length:482
 aligned with RK_BOVIN | P28327 from UniProtKB/Swiss-Prot  Length:561

    Alignment length:503
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530   
             RK_BOVIN    31 RDRKYLARLKLPPLSKCEALRESLDLGFEGMCLEQPIGKRLFQQFLRTHEQHGPALQLWKDIEDYDTADDALRPQKAQALRAAYLEPQAQLFCSFLDAETVARARAGAGDGLFQPLLRAVLAHLGQAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRTVYAKNIQDVGAFSTVKGVAFEKADTEFFQEFASGTCPIPWQEEMIETGVFGDLNVWRP 533
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhh.....hhhhhhhhhh....hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhh-----.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhh.eeeeeeeeee..eeeeeeee.....eeeeeeeehhhhhhh.hhhhhhhhhhhhhhh.......eeeeee...eeeeee......hhhhhhhh........hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.....eee......ee..................hhhhhh.....hhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhh........hhhhhhhhhhhh..hhhhh.......hhhhhhhhhhh..hhhhhhh...........----------------......hhhhhhhhhhhh.eehhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------RGS  PDB: C:63-172 UniProt: 63-172                                                                            --------------------PROTEIN_KINASE_ATP      ---------------------------------------------------------------------------------------------PROTEIN_KINAS----------------------------------------------------------------------------------------------------------------------------------AGC_KINASE_CTER  PDB: C:453-518 UniProt: 453-518                  --------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: C:31-230 (gaps) UniProt: 1-230 [INCOMPLETE]                                                                                                                                              Exon 1.2              -------------------------------------------------------------------------Exon 1.7  PDB: C:326-354     ------------------------------------------------------------------------------------------------------------Exon 1.10  PDB: C:463-533 (gaps) UniProt: 463-561 [INCOMPLETE]          Transcript 1 (1)
           Transcript 1 (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.6a  PDB: C:252-326 UniProt: 252-326                                 ---------------------------Exon 1.8  PDB: C:354-395 UniProt: 354-395 Exon 1.9  PDB: C:396-463 UniProt: 396-463                           ---------------------------------------------------------------------- Transcript 1 (2)
                 3qc9 C  31 RDRKYLARLKLPPLSKCEALRESLDLGFEGMCLEQPIGKRLFQQFLRTHEQHGPALQLWKDIEDYDTADDALRPQKAQALRAAYLEPQAQLFCSFLDAETVARARA-----LFQPLLRAVLAHLGQAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDS----------------VKGVAFEKADTEFFQEFASGTCPIPWQEEMIETGVFGDLNVWRP 533
                                    40        50        60        70        80        90       100       110       120       130     |   - |     150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470  |      -       490       500       510       520       530   
                                                                                                                                   136   142                                                                                                                                                                                                                                                                                                                                        473              490

Chain D from PDB  Type:PROTEIN  Length:486
 aligned with RK_BOVIN | P28327 from UniProtKB/Swiss-Prot  Length:561

    Alignment length:503
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530   
             RK_BOVIN    31 RDRKYLARLKLPPLSKCEALRESLDLGFEGMCLEQPIGKRLFQQFLRTHEQHGPALQLWKDIEDYDTADDALRPQKAQALRAAYLEPQAQLFCSFLDAETVARARAGAGDGLFQPLLRAVLAHLGQAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRTVYAKNIQDVGAFSTVKGVAFEKADTEFFQEFASGTCPIPWQEEMIETGVFGDLNVWRP 533
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) --------------------------RGS-3qc9D05 D:57-171                                                                                               ---------------Pkinase-3qc9D01 D:187-447                                                                                                                                                                                                                                            -------------------------------------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) --------------------------RGS-3qc9D06 D:57-171                                                                                               ---------------Pkinase-3qc9D02 D:187-447                                                                                                                                                                                                                                            -------------------------------------------------------------------------------------- Pfam domains (2)
           Pfam domains (3) --------------------------RGS-3qc9D07 D:57-171                                                                                               ---------------Pkinase-3qc9D03 D:187-447                                                                                                                                                                                                                                            -------------------------------------------------------------------------------------- Pfam domains (3)
           Pfam domains (4) --------------------------RGS-3qc9D08 D:57-171                                                                                               ---------------Pkinase-3qc9D04 D:187-447                                                                                                                                                                                                                                            -------------------------------------------------------------------------------------- Pfam domains (4)
         Sec.struct. author .hhhhhh.....hhhhhhhhhh....hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhh.eeeeeeeeee..eeeeeeee.....eeeeeeeehhhhhhh.hhhhhhhhhhhhhhh.......eeeeee...eeeeee......hhhhhhhh........hhhhhhhhhhhhhhhhhhhhhh.ee....hhh.eee.....eee......ee..................hhhhhh.....hhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhh........hhhhhhhhhhhhh.hhhhh.......hhhhhhhhhhh..hhhhhhh..........-----------------......hhhhhhhhhhhh.eehhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------RGS  PDB: D:63-172 UniProt: 63-172                                                                            --------------------PROTEIN_KINASE_ATP      ---------------------------------------------------------------------------------------------PROTEIN_KINAS----------------------------------------------------------------------------------------------------------------------------------AGC_KINASE_CTER  PDB: D:453-518 UniProt: 453-518                  --------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: D:31-230 UniProt: 1-230 [INCOMPLETE]                                                                                                                                                     Exon 1.2              -------------------------------------------------------------------------Exon 1.7  PDB: D:326-354     ------------------------------------------------------------------------------------------------------------Exon 1.10  PDB: D:463-533 (gaps) UniProt: 463-561 [INCOMPLETE]          Transcript 1 (1)
           Transcript 1 (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.6a  PDB: D:252-326 UniProt: 252-326                                 ---------------------------Exon 1.8  PDB: D:354-395 UniProt: 354-395 Exon 1.9  PDB: D:396-463 UniProt: 396-463                           ---------------------------------------------------------------------- Transcript 1 (2)
                 3qc9 D  31 RDRKYLARLKLPPLSKCEALRESLDLGFEGMCLEQPIGKRLFQQFLRTHEQHGPALQLWKDIEDYDTADDALRPQKAQALRAAYLEPQAQLFCSFLDAETVARARAGAGDGLFQPLLRAVLAHLGQAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPD-----------------VKGVAFEKADTEFFQEFASGTCPIPWQEEMIETGVFGDLNVWRP 533
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470 |       -       490       500       510       520       530   
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   472               490

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 3QC9)

(no "CATH Domain" information available for 3QC9)

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: PKinase (934)

Family: Pkinase (680)

Bos taurus (Bovine) (47)

1a	Pkinase-3qc9D01	D:187-447
1b	Pkinase-3qc9D02	D:187-447
1c	Pkinase-3qc9D03	D:187-447
1d	Pkinase-3qc9D04	D:187-447

Clan: RGS (17)

Family: RGS (16)

Bos taurus (Bovine) (6)

2a	RGS-3qc9D05	D:57-171
2b	RGS-3qc9D06	D:57-171
2c	RGS-3qc9D07	D:57-171
2d	RGS-3qc9D08	D:57-171

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (RK_BOVIN | P28327)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0004703	G-protein coupled receptor kinase activity	Catalysis of the reaction: ATP + G-protein coupled receptor = ADP + G-protein coupled receptor phosphate.
	GO:0016301	kinase activity	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0004672	protein kinase activity	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
	GO:0004674	protein serine/threonine kinase activity	Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.
	GO:0050254	rhodopsin kinase activity	Catalysis of the reaction: ATP + rhodopsin = ADP + phosphorhodopsin.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
	GO:0016310	phosphorylation	The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
	GO:0046777	protein autophosphorylation	The phosphorylation by a protein of one or more of its own amino acid residues (cis-autophosphorylation), or residues on an identical protein (trans-autophosphorylation).
	GO:0006468	protein phosphorylation	The process of introducing a phosphate group on to a protein.
	GO:0022400	regulation of rhodopsin mediated signaling pathway	Any process that modulates the frequency, rate or extent of rhodopsin-mediated signaling.
	GO:0050896	response to stimulus	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. The process begins with detection of the stimulus and ends with a change in state or activity or the cell or organism.
	GO:0007165	signal transduction	The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
	GO:0007601	visual perception	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image.
cellular component
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0097381	photoreceptor disc membrane	Ovally-shaped membranous stack located inside the photoreceptor outer segment, and containing densely packed molecules of the photoreceptor protein rhodopsin that traverse the lipid bilayer. Disc membranes are apparently derived from the plasma membrane in the region of the cilium that connects the photoreceptor outer segment to the inner segment.

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	Cis Peptide Bonds
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	3qc9
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	RK_BOVIN \| P28327
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	2.7.11.14
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	RK_BOVIN \| P28327	:	2i94 3c4w 3c4x 3c4y 3c4z 3c50 3c51 3t8o 4l9i 4pni 4wbo

(no "Related Entries Specified in the PDB File" available for 3QC9)

Description

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Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 14)

Sites (14, 14)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

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Exons (7, 28)

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