Chain A from PDB Type:PROTEIN Length:204
aligned with A6LAN0_PARD8 | A6LAN0 from UniProtKB/TrEMBL Length:227
Alignment length:204
33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223
A6LAN0_PARD8 24 TEKGDWAQFGRYAEANKTVKVPSNVVFMGNSITDGWWPADSTFFIRNNFVDRGISGQTTSEMLVRFRQDVINLKPKAVVILAGINDIAHNNGVIALENVFGNLVSMAELAKANHIKVIFCSVLPAYDFPWRPGMQPADKVIQLNKWIKEYADKNGLTYVDYHSAMKDERNGLPANLSKDGVHPTLEGYKIMEKIVLEAIHKTVK 227
SCOP domains d3p94a_ A: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...........hhhhhh.....eeeeeeehhhhhhhhhhh.hhhhhhheeeee....hhhhhhhhhhhhhhhh.eeeeeee.hhhhhh......hhhhhhhhhhhhhhhhhhh..eeeee...............hhhhhhhhhhhhhhhhhhh..eeehhhhhhh.................hhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
3p94 A 0 GEKGDWAQFGRYAEANKTVKVPSNVVFmGNSITDGWWPADSTFFIRNNFVDRGISGQTTSEmLVRFRQDVINLKPKAVVILAGINDIAHNNGVIALENVFGNLVSmAELAKANHIKVIFCSVLPAYDFPWRPGmQPADKVIQLNKWIKEYADKNGLTYVDYHSAmKDERNGLPANLSKDGVHPTLEGYKImEKIVLEAIHKTVK 227
|| 33 43 |53 63 73 83 | 93 103 113 123 | 133 143 153 | 163 173 183 | 193 203 213| 223
|| 51-MSE 85-MSE 129-MSE 157-MSE 188-MSE 214-MSE
0|
25
Chain B from PDB Type:PROTEIN Length:204
aligned with A6LAN0_PARD8 | A6LAN0 from UniProtKB/TrEMBL Length:227
Alignment length:204
33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223
A6LAN0_PARD8 24 TEKGDWAQFGRYAEANKTVKVPSNVVFMGNSITDGWWPADSTFFIRNNFVDRGISGQTTSEMLVRFRQDVINLKPKAVVILAGINDIAHNNGVIALENVFGNLVSMAELAKANHIKVIFCSVLPAYDFPWRPGMQPADKVIQLNKWIKEYADKNGLTYVDYHSAMKDERNGLPANLSKDGVHPTLEGYKIMEKIVLEAIHKTVK 227
SCOP domains d3p94b_ B: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...........hhhhhh.....eeeeeeehhhhhhhhhhh.hhhhhhheeeee....hhhhhhhhhhhhhhhh.eeeeeee.hhhhhh......hhhhhhhhhhhhhhhhhhh..eeeee...............hhhhhhhhhhhhhhhhhhh..eeehhhhhhh.................hhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
3p94 B 0 GEKGDWAQFGRYAEANKTVKVPSNVVFmGNSITDGWWPADSTFFIRNNFVDRGISGQTTSEmLVRFRQDVINLKPKAVVILAGINDIAHNNGVIALENVFGNLVSmAELAKANHIKVIFCSVLPAYDFPWRPGmQPADKVIQLNKWIKEYADKNGLTYVDYHSAmKDERNGLPANLSKDGVHPTLEGYKImEKIVLEAIHKTVK 227
|| 33 43 |53 63 73 83 | 93 103 113 123 | 133 143 153 | 163 173 183 | 193 203 213| 223
0| 51-MSE 85-MSE 129-MSE 157-MSE 188-MSE 214-MSE
25
Chain C from PDB Type:PROTEIN Length:200
aligned with A6LAN0_PARD8 | A6LAN0 from UniProtKB/TrEMBL Length:227
Alignment length:200
36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226
A6LAN0_PARD8 27 GDWAQFGRYAEANKTVKVPSNVVFMGNSITDGWWPADSTFFIRNNFVDRGISGQTTSEMLVRFRQDVINLKPKAVVILAGINDIAHNNGVIALENVFGNLVSMAELAKANHIKVIFCSVLPAYDFPWRPGMQPADKVIQLNKWIKEYADKNGLTYVDYHSAMKDERNGLPANLSKDGVHPTLEGYKIMEKIVLEAIHKTV 226
SCOP domains d3p94c_ C: automated matches SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhh.....eeeeeeehhhhhhhhhhh.hhhhhhheeeee....hhhhhhhhhhhhhhhh.eeeeeee.hhhhhh......hhhhhhhhhhhhhhhhhhh..eeeee..............hhhhhhhhhhhhhhhhhhhh..eeehhhhhhh.................hhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3p94 C 27 GDWAQFGRYAEANKTVKVPSNVVFmGNSITDGWWPADSTFFIRNNFVDRGISGQTTSEmLVRFRQDVINLKPKAVVILAGINDIAHNNGVIALENVFGNLVSmAELAKANHIKVIFCSVLPAYDFPWRPGmQPADKVIQLNKWIKEYADKNGLTYVDYHSAmKDERNGLPANLSKDGVHPTLEGYKImEKIVLEAIHKTV 226
36 46 | 56 66 76 86 96 106 116 126 | 136 146 156| 166 176 186 | 196 206 216 226
51-MSE 85-MSE 129-MSE 157-MSE 188-MSE 214-MSE
Chain D from PDB Type:PROTEIN Length:201
aligned with A6LAN0_PARD8 | A6LAN0 from UniProtKB/TrEMBL Length:227
Alignment length:201
35 45 55 65 75 85 95 105 115 125 135 145 155 165 175 185 195 205 215 225
A6LAN0_PARD8 26 KGDWAQFGRYAEANKTVKVPSNVVFMGNSITDGWWPADSTFFIRNNFVDRGISGQTTSEMLVRFRQDVINLKPKAVVILAGINDIAHNNGVIALENVFGNLVSMAELAKANHIKVIFCSVLPAYDFPWRPGMQPADKVIQLNKWIKEYADKNGLTYVDYHSAMKDERNGLPANLSKDGVHPTLEGYKIMEKIVLEAIHKTV 226
SCOP domains d3p94d_ D: automated matches SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) -----------------------Lipase_GDSL_2-3p94D01 D:49-214 ------------ Pfam domains (1)
Pfam domains (2) -----------------------Lipase_GDSL_2-3p94D02 D:49-214 ------------ Pfam domains (2)
Pfam domains (3) -----------------------Lipase_GDSL_2-3p94D03 D:49-214 ------------ Pfam domains (3)
Pfam domains (4) -----------------------Lipase_GDSL_2-3p94D04 D:49-214 ------------ Pfam domains (4)
Sec.struct. author .........hhhhhh.....eeeeeeehhhhhhhhhhh.hhhhhhheeeee....hhhhhhhhhhhhhhhh.eeeeeee.hhhhhh......hhhhhhhhhhhhhhhhhhh..eeeee...............hhhhhhhhhhhhhhhhhhh..eeehhhhhhh.................hhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3p94 D 26 KGDWAQFGRYAEANKTVKVPSNVVFmGNSITDGWWPADSTFFIRNNFVDRGISGQTTSEmLVRFRQDVINLKPKAVVILAGINDIAHNNGVIALENVFGNLVSmAELAKANHIKVIFCSVLPAYDFPWRPGmQPADKVIQLNKWIKEYADKNGLTYVDYHSAmKDERNGLPANLSKDGVHPTLEGYKImEKIVLEAIHKTV 226
35 45 | 55 65 75 85 95 105 115 125 | 135 145 155 | 165 175 185 | 195 205 215 225
51-MSE 85-MSE 129-MSE 157-MSE 188-MSE 214-MSE
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |