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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF A GDSL-LIKE LIPASE (BDI_0976) FROM PARABACTEROIDES DISTASONIS ATCC 8503 AT 1.93 A RESOLUTION
Keywords SERINE HYDROLASE, CATALYTIC TRIAD, GDSL-LIKE LIPASE, FLAVODO STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, PSI-BIOLOGY, HYDROLASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3P94     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   GDSL-LIKE LIPASE  A 204 1552 48
2  Protein   GDSL-LIKE LIPASE  B 204 1562 48
3  Protein   GDSL-LIKE LIPASE  C 200 1521 48
4  Protein   GDSL-LIKE LIPASE  D 201 1537 48
5  Ligand   GDSL-LIKE LIPASE  A 1 0 10
6  Ligand   GDSL-LIKE LIPASE  B 1 0 13
7 Water     714 0 714
total       1525 6172 929

Proteins
Unit 1 GLY0 GLU25 LYS26 GLY27 ASP28 TRP29 ALA30 GLN31 PHE32 GLY33 ARG34 TYR35 ALA36 GLU37 ALA38 ASN39 LYS40 THR41 VAL42 LYS43 VAL44 PRO45 SER46 ASN47 VAL48 VAL49 PHE50 MSE51 GLY52 ASN53 SER54 ILE55 THR56 ASP57 GLY58 TRP59 TRP60 PRO61 ALA62 ASP63 SER64 THR65 PHE66 PHE67 ILE68 ARG69 ASN70 ASN71 PHE72 VAL73 ASP74 ARG75 GLY76 ILE77 SER78 GLY79 GLN80 THR81 THR82 SER83 GLU84 MSE85 LEU86 VAL87 ARG88 PHE89 ARG90 GLN91 ASP92 VAL93 ILE94 ASN95 LEU96 LYS97 PRO98 LYS99 ALA100 VAL101 VAL102 ILE103 LEU104 ALA105 GLY106 ILE107 ASN108 ASP109 ILE110 ALA111 HIS112 ASN113 ASN114 GLY115 VAL116 ILE117 ALA118 LEU119 GLU120 ASN121 VAL122 PHE123 GLY124 ASN125 LEU126 VAL127 SER128 MSE129 ALA130 GLU131 LEU132 ALA133 LYS134 ALA135 ASN136 HIS137 ILE138 LYS139 VAL140 ILE141 PHE142 CYS143 SER144 VAL145 LEU146 PRO147 ALA148 TYR149 ASP150 PHE151 PRO152 TRP153 ARG154 PRO155 GLY156 MSE157 GLN158 PRO159 ALA160 ASP161 LYS162 VAL163 ILE164 GLN165 LEU166 ASN167 LYS168 TRP169 ILE170 LYS171 GLU172 TYR173 ALA174 ASP175 LYS176 ASN177 GLY178 LEU179 THR180 TYR181 VAL182 ASP183 TYR184 HIS185 SER186 ALA187 MSE188 LYS189 ASP190 GLU191 ARG192 ASN193 GLY194 LEU195 PRO196 ALA197 ASN198 LEU199 SER200 LYS201 ASP202 GLY203 VAL204 HIS205 PRO206 THR207 LEU208 GLU209 GLY210 TYR211 LYS212 ILE213 MSE214 GLU215 LYS216 ILE217 VAL218 LEU219 GLU220 ALA221 ILE222 HIS223 LYS224 THR225 VAL226 LYS227
Unit 2 GLY0 GLU25 LYS26 GLY27 ASP28 TRP29 ALA30 GLN31 PHE32 GLY33 ARG34 TYR35 ALA36 GLU37 ALA38 ASN39 LYS40 THR41 VAL42 LYS43 VAL44 PRO45 SER46 ASN47 VAL48 VAL49 PHE50 MSE51 GLY52 ASN53 SER54 ILE55 THR56 ASP57 GLY58 TRP59 TRP60 PRO61 ALA62 ASP63 SER64 THR65 PHE66 PHE67 ILE68 ARG69 ASN70 ASN71 PHE72 VAL73 ASP74 ARG75 GLY76 ILE77 SER78 GLY79 GLN80 THR81 THR82 SER83 GLU84 MSE85 LEU86 VAL87 ARG88 PHE89 ARG90 GLN91 ASP92 VAL93 ILE94 ASN95 LEU96 LYS97 PRO98 LYS99 ALA100 VAL101 VAL102 ILE103 LEU104 ALA105 GLY106 ILE107 ASN108 ASP109 ILE110 ALA111 HIS112 ASN113 ASN114 GLY115 VAL116 ILE117 ALA118 LEU119 GLU120 ASN121 VAL122 PHE123 GLY124 ASN125 LEU126 VAL127 SER128 MSE129 ALA130 GLU131 LEU132 ALA133 LYS134 ALA135 ASN136 HIS137 ILE138 LYS139 VAL140 ILE141 PHE142 CYS143 SER144 VAL145 LEU146 PRO147 ALA148 TYR149 ASP150 PHE151 PRO152 TRP153 ARG154 PRO155 GLY156 MSE157 GLN158 PRO159 ALA160 ASP161 LYS162 VAL163 ILE164 GLN165 LEU166 ASN167 LYS168 TRP169 ILE170 LYS171 GLU172 TYR173 ALA174 ASP175 LYS176 ASN177 GLY178 LEU179 THR180 TYR181 VAL182 ASP183 TYR184 HIS185 SER186 ALA187 MSE188 LYS189 ASP190 GLU191 ARG192 ASN193 GLY194 LEU195 PRO196 ALA197 ASN198 LEU199 SER200 LYS201 ASP202 GLY203 VAL204 HIS205 PRO206 THR207 LEU208 GLU209 GLY210 TYR211 LYS212 ILE213 MSE214 GLU215 LYS216 ILE217 VAL218 LEU219 GLU220 ALA221 ILE222 HIS223 LYS224 THR225 VAL226 LYS227
Unit 3 GLY27 ASP28 TRP29 ALA30 GLN31 PHE32 GLY33 ARG34 TYR35 ALA36 GLU37 ALA38 ASN39 LYS40 THR41 VAL42 LYS43 VAL44 PRO45 SER46 ASN47 VAL48 VAL49 PHE50 MSE51 GLY52 ASN53 SER54 ILE55 THR56 ASP57 GLY58 TRP59 TRP60 PRO61 ALA62 ASP63 SER64 THR65 PHE66 PHE67 ILE68 ARG69 ASN70 ASN71 PHE72 VAL73 ASP74 ARG75 GLY76 ILE77 SER78 GLY79 GLN80 THR81 THR82 SER83 GLU84 MSE85 LEU86 VAL87 ARG88 PHE89 ARG90 GLN91 ASP92 VAL93 ILE94 ASN95 LEU96 LYS97 PRO98 LYS99 ALA100 VAL101 VAL102 ILE103 LEU104 ALA105 GLY106 ILE107 ASN108 ASP109 ILE110 ALA111 HIS112 ASN113 ASN114 GLY115 VAL116 ILE117 ALA118 LEU119 GLU120 ASN121 VAL122 PHE123 GLY124 ASN125 LEU126 VAL127 SER128 MSE129 ALA130 GLU131 LEU132 ALA133 LYS134 ALA135 ASN136 HIS137 ILE138 LYS139 VAL140 ILE141 PHE142 CYS143 SER144 VAL145 LEU146 PRO147 ALA148 TYR149 ASP150 PHE151 PRO152 TRP153 ARG154 PRO155 GLY156 MSE157 GLN158 PRO159 ALA160 ASP161 LYS162 VAL163 ILE164 GLN165 LEU166 ASN167 LYS168 TRP169 ILE170 LYS171 GLU172 TYR173 ALA174 ASP175 LYS176 ASN177 GLY178 LEU179 THR180 TYR181 VAL182 ASP183 TYR184 HIS185 SER186 ALA187 MSE188 LYS189 ASP190 GLU191 ARG192 ASN193 GLY194 LEU195 PRO196 ALA197 ASN198 LEU199 SER200 LYS201 ASP202 GLY203 VAL204 HIS205 PRO206 THR207 LEU208 GLU209 GLY210 TYR211 LYS212 ILE213 MSE214 GLU215 LYS216 ILE217 VAL218 LEU219 GLU220 ALA221 ILE222 HIS223 LYS224 THR225 VAL226
Unit 4 LYS26 GLY27 ASP28 TRP29 ALA30 GLN31 PHE32 GLY33 ARG34 TYR35 ALA36 GLU37 ALA38 ASN39 LYS40 THR41 VAL42 LYS43 VAL44 PRO45 SER46 ASN47 VAL48 VAL49 PHE50 MSE51 GLY52 ASN53 SER54 ILE55 THR56 ASP57 GLY58 TRP59 TRP60 PRO61 ALA62 ASP63 SER64 THR65 PHE66 PHE67 ILE68 ARG69 ASN70 ASN71 PHE72 VAL73 ASP74 ARG75 GLY76 ILE77 SER78 GLY79 GLN80 THR81 THR82 SER83 GLU84 MSE85 LEU86 VAL87 ARG88 PHE89 ARG90 GLN91 ASP92 VAL93 ILE94 ASN95 LEU96 LYS97 PRO98 LYS99 ALA100 VAL101 VAL102 ILE103 LEU104 ALA105 GLY106 ILE107 ASN108 ASP109 ILE110 ALA111 HIS112 ASN113 ASN114 GLY115 VAL116 ILE117 ALA118 LEU119 GLU120 ASN121 VAL122 PHE123 GLY124 ASN125 LEU126 VAL127 SER128 MSE129 ALA130 GLU131 LEU132 ALA133 LYS134 ALA135 ASN136 HIS137 ILE138 LYS139 VAL140 ILE141 PHE142 CYS143 SER144 VAL145 LEU146 PRO147 ALA148 TYR149 ASP150 PHE151 PRO152 TRP153 ARG154 PRO155 GLY156 MSE157 GLN158 PRO159 ALA160 ASP161 LYS162 VAL163 ILE164 GLN165 LEU166 ASN167 LYS168 TRP169 ILE170 LYS171 GLU172 TYR173 ALA174 ASP175 LYS176 ASN177 GLY178 LEU179 THR180 TYR181 VAL182 ASP183 TYR184 HIS185 SER186 ALA187 MSE188 LYS189 ASP190 GLU191 ARG192 ASN193 GLY194 LEU195 PRO196 ALA197 ASN198 LEU199 SER200 LYS201 ASP202 GLY203 VAL204 HIS205 PRO206 THR207 LEU208 GLU209 GLY210 TYR211 LYS212 ILE213 MSE214 GLU215 LYS216 ILE217 VAL218 LEU219 GLU220 ALA221 ILE222 HIS223 LYS224 THR225 VAL226

Ligands
Unit 5 PG4228
Unit 6 PG4229

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany