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Biological Unit 11 (Jmol Viewer)

Biological Unit 12 (Jmol Viewer)

Title :   LIGAND BINDING DOMAIN OF EPHA7

Authors :   J. R. Walker, L. Yermekbayeva, A. Seitova, J. Kania, C. Bountra, J. Weig C. H. Arrowsmith, A. M. Edwards, A. Bochkarev, S. Dhe-Paganon

Date :   30 Jun 10 (Deposition) - 08 Dec 10 (Release) - 08 Dec 10 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.30

Chains :   Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: C  (1x)
Biol. Unit 4: D  (1x)
Biol. Unit 5: E  (1x)
Biol. Unit 6: F  (1x)
Biol. Unit 7: G  (1x)
Biol. Unit 8: H  (1x)
Biol. Unit 9: I  (1x)
Biol. Unit 10: J  (1x)
Biol. Unit 11: K  (1x)
Biol. Unit 12: L  (1x)

Keywords :   Kinase, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   J. R. Walker, L. Yermekbayeva, A. Seitova, J. Kania, C. Bountra, J. Weigelt, C. H. Arrowsmith, A. M. Edwards, A. Bochkarev, S. Dhe-Paganon
Ephrin A7 Ligand Binding Domain
To Be Published
PubMed: search

Molecule 1 - EPHRIN RECEPTOR
	Chains	:	A, B, C, D, E, F, G, H, I, J, K, L
	EC Number	:	2.7.10.1
	Engineered	:	YES
	Expression System	:	SPODOPTERA FRUGIPERDA
	Expression System Plasmid	:	PFHMSP-LIC-C
	Expression System Strain	:	SF9
	Expression System Taxid	:	7108
	Expression System Vector Type	:	PLASMID
	Fragment	:	RESIDUES 29-204
	Gene	:	EPHA7
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606

		1	2	3	4	5	6	7	8	9	10	11	12
Asymmetric Unit	:	A	B	C	D	E	F	G	H	I	J	K	L
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:			C
Biological Unit 4 (1x)	:				D
Biological Unit 5 (1x)	:					E
Biological Unit 6 (1x)	:						F
Biological Unit 7 (1x)	:							G
Biological Unit 8 (1x)	:								H
Biological Unit 9 (1x)	:									I
Biological Unit 10 (1x)	:										J
Biological Unit 11 (1x)	:											K
Biological Unit 12 (1x)	:												L

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 12)

No.	Name	Count	Type	Full Name
1	CL	2	Ligand/Ion	CHLORIDE ION
2	SO4	10	Ligand/Ion	SULFATE ION

Biological Unit 1 (1, 1)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	SO4	1	Ligand/Ion	SULFATE ION

Biological Unit 2 (1, 3)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	SO4	3	Ligand/Ion	SULFATE ION

Biological Unit 3 (1, 1)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	SO4	1	Ligand/Ion	SULFATE ION

Biological Unit 4 (1, 2)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	SO4	2	Ligand/Ion	SULFATE ION

Biological Unit 5 (0, 0)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	SO4	-1	Ligand/Ion	SULFATE ION

Biological Unit 6 (0, 0)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	SO4	-1	Ligand/Ion	SULFATE ION

Biological Unit 7 (1, 2)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	SO4	2	Ligand/Ion	SULFATE ION

Biological Unit 8 (0, 0)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	SO4	-1	Ligand/Ion	SULFATE ION

Biological Unit 9 (0, 0)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	SO4	-1	Ligand/Ion	SULFATE ION

Biological Unit 10 (1, 1)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	SO4	1	Ligand/Ion	SULFATE ION

Biological Unit 11 (0, 0)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	SO4	-1	Ligand/Ion	SULFATE ION

Biological Unit 12 (0, 0)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	SO4	-1	Ligand/Ion	SULFATE ION

Asymmetric Unit (12, 12)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ARG A:139 , HOH A:341 , ASN C:137 , ARG G:139	BINDING SITE FOR RESIDUE SO4 G 301
02	AC2	SOFTWARE	THR B:130	BINDING SITE FOR RESIDUE CL B 300
03	AC3	SOFTWARE	ASN B:137 , ARG B:139 , ARG E:139 , ASN E:141	BINDING SITE FOR RESIDUE SO4 B 301
04	AC4	SOFTWARE	ARG B:139 , GLU B:140 , ASN B:141 , LYS D:179	BINDING SITE FOR RESIDUE SO4 B 302
05	AC5	SOFTWARE	THR A:156 , LYS B:39 , LYS B:199 , HOH B:384 , ARG G:107	BINDING SITE FOR RESIDUE SO4 B 303
06	AC6	SOFTWARE	THR C:130	BINDING SITE FOR RESIDUE CL C 300
07	AC7	SOFTWARE	ARG A:139 , ASN A:141 , HOH A:313 , HOH A:360 , ASN C:137 , ARG C:139	BINDING SITE FOR RESIDUE SO4 A 301
08	AC8	SOFTWARE	ARG D:139 , GLU D:140 , ASN D:141 , HOH D:337 , ASN E:137 , ARG E:139 , LEU E:142 , HOH E:342	BINDING SITE FOR RESIDUE SO4 D 301
09	AC9	SOFTWARE	ASN B:137 , ARG D:139 , ARG E:139	BINDING SITE FOR RESIDUE SO4 D 302
10	BC1	SOFTWARE	ASN A:137 , ARG A:139 , HOH A:364 , ARG G:139 , GLU G:140 , ASN G:141	BINDING SITE FOR RESIDUE SO4 G 217
11	BC2	SOFTWARE	ARG C:139 , GLU C:140 , ASN C:141 , LYS G:179	BINDING SITE FOR RESIDUE SO4 C 302
12	BC3	SOFTWARE	ARG J:107 , LYS K:39 , LYS K:199 , THR L:156	BINDING SITE FOR RESIDUE SO4 J 301

Asymmetric Unit

No.	Residues
1	A:74	-	A:192
2	A:109	-	A:119
3	B:74	-	B:192
4	B:109	-	B:119
5	C:74	-	C:192
6	C:109	-	C:119
7	D:74	-	D:192
8	D:109	-	D:119
9	E:74	-	E:192
10	E:109	-	E:119
11	F:74	-	F:192
12	F:109	-	F:119
13	G:74	-	G:192
14	G:109	-	G:119
15	H:74	-	H:192
16	H:109	-	H:119
17	I:109	-	I:119
18	J:74	-	J:192
19	J:109	-	J:119
20	K:74	-	K:192
21	K:109	-	K:119
22	L:74	-	L:192
23	L:109	-	L:119

Asymmetric Unit

No.	Residues
1	Ser A:50	-	Pro A:51
2	Gly A:175	-	Pro A:176
3	Ser B:50	-	Pro B:51
4	Gly B:175	-	Pro B:176
5	Ser C:50	-	Pro C:51
6	Gly C:175	-	Pro C:176
7	Ser D:50	-	Pro D:51
8	Gly D:175	-	Pro D:176
9	Ser E:50	-	Pro E:51
10	Gly E:175	-	Pro E:176
11	Ser F:50	-	Pro F:51
12	Gly F:175	-	Pro F:176
13	Ser G:50	-	Pro G:51
14	Gly G:175	-	Pro G:176
15	Ser H:50	-	Pro H:51
16	Gly H:117	-	Thr H:118
17	Gly H:175	-	Pro H:176
18	Ser I:50	-	Pro I:51
19	Gly I:175	-	Pro I:176
20	Ser J:50	-	Pro J:51
21	Gly J:175	-	Pro J:176
22	Ser K:50	-	Pro K:51
23	Gly K:175	-	Pro K:176
24	Ser L:50	-	Pro L:51
25	Gly L:175	-	Pro L:176

Asymmetric Unit (2, 24)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_022105	I	138	V	EPHA7_HUMAN	Polymorphism	2278107	A/B/C/D/E/F/G/H/I/J/K/L	I	138	V
2	UniProt	VAR_042150	E	170	K	EPHA7_HUMAN	Unclassified	---	A/B/C/D/E/F/G/H/I/J/K/L	E	170	K

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (2, 2)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_022105	I	138	V	EPHA7_HUMAN	Polymorphism	2278107	A	I	138	V
2	UniProt	VAR_042150	E	170	K	EPHA7_HUMAN	Unclassified	---	A	E	170	K

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 2 (2, 2)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_022105	I	138	V	EPHA7_HUMAN	Polymorphism	2278107	B	I	138	V
2	UniProt	VAR_042150	E	170	K	EPHA7_HUMAN	Unclassified	---	B	E	170	K

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 3 (2, 2)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_022105	I	138	V	EPHA7_HUMAN	Polymorphism	2278107	C	I	138	V
2	UniProt	VAR_042150	E	170	K	EPHA7_HUMAN	Unclassified	---	C	E	170	K

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 4 (2, 2)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_022105	I	138	V	EPHA7_HUMAN	Polymorphism	2278107	D	I	138	V
2	UniProt	VAR_042150	E	170	K	EPHA7_HUMAN	Unclassified	---	D	E	170	K

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 5 (2, 2)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_022105	I	138	V	EPHA7_HUMAN	Polymorphism	2278107	E	I	138	V
2	UniProt	VAR_042150	E	170	K	EPHA7_HUMAN	Unclassified	---	E	E	170	K

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 6 (2, 2)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_022105	I	138	V	EPHA7_HUMAN	Polymorphism	2278107	F	I	138	V
2	UniProt	VAR_042150	E	170	K	EPHA7_HUMAN	Unclassified	---	F	E	170	K

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 7 (2, 2)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_022105	I	138	V	EPHA7_HUMAN	Polymorphism	2278107	G	I	138	V
2	UniProt	VAR_042150	E	170	K	EPHA7_HUMAN	Unclassified	---	G	E	170	K

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 8 (2, 2)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_022105	I	138	V	EPHA7_HUMAN	Polymorphism	2278107	H	I	138	V
2	UniProt	VAR_042150	E	170	K	EPHA7_HUMAN	Unclassified	---	H	E	170	K

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 9 (2, 2)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_022105	I	138	V	EPHA7_HUMAN	Polymorphism	2278107	I	I	138	V
2	UniProt	VAR_042150	E	170	K	EPHA7_HUMAN	Unclassified	---	I	E	170	K

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 10 (2, 2)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_022105	I	138	V	EPHA7_HUMAN	Polymorphism	2278107	J	I	138	V
2	UniProt	VAR_042150	E	170	K	EPHA7_HUMAN	Unclassified	---	J	E	170	K

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 11 (2, 2)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_022105	I	138	V	EPHA7_HUMAN	Polymorphism	2278107	K	I	138	V
2	UniProt	VAR_042150	E	170	K	EPHA7_HUMAN	Unclassified	---	K	E	170	K

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 12 (2, 2)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_022105	I	138	V	EPHA7_HUMAN	Polymorphism	2278107	L	I	138	V
2	UniProt	VAR_042150	E	170	K	EPHA7_HUMAN	Unclassified	---	L	E	170	K

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Asymmetric Unit (2, 24)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	EPH_LBD	PS51550	Eph receptor ligand-binding domain profile.	EPHA7_HUMAN	32-210	12	A:32-204 B:32-204 C:32-204 D:32-204 E:32-204 F:32-204 G:32-204 H:32-204 I:32-204 J:32-204 K:32-204 L:32-202
2	RECEPTOR_TYR_KIN_V_1	PS00790	Receptor tyrosine kinase class V signature 1.	EPHA7_HUMAN	186-206	12	A:186-204 B:186-204 C:186-204 D:186-204 E:186-204 F:186-204 G:186-204 H:186-204 I:186-204 J:186-204 K:186-204 L:186-202

Biological Unit 1 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	EPH_LBD	PS51550	Eph receptor ligand-binding domain profile.	EPHA7_HUMAN	32-210	1	A:32-204 - - - - - - - - - - -
2	RECEPTOR_TYR_KIN_V_1	PS00790	Receptor tyrosine kinase class V signature 1.	EPHA7_HUMAN	186-206	1	A:186-204 - - - - - - - - - - -

Biological Unit 2 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	EPH_LBD	PS51550	Eph receptor ligand-binding domain profile.	EPHA7_HUMAN	32-210	1	- B:32-204 - - - - - - - - - -
2	RECEPTOR_TYR_KIN_V_1	PS00790	Receptor tyrosine kinase class V signature 1.	EPHA7_HUMAN	186-206	1	- B:186-204 - - - - - - - - - -

Biological Unit 3 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	EPH_LBD	PS51550	Eph receptor ligand-binding domain profile.	EPHA7_HUMAN	32-210	1	- - C:32-204 - - - - - - - - -
2	RECEPTOR_TYR_KIN_V_1	PS00790	Receptor tyrosine kinase class V signature 1.	EPHA7_HUMAN	186-206	1	- - C:186-204 - - - - - - - - -

Biological Unit 4 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	EPH_LBD	PS51550	Eph receptor ligand-binding domain profile.	EPHA7_HUMAN	32-210	1	- - - D:32-204 - - - - - - - -
2	RECEPTOR_TYR_KIN_V_1	PS00790	Receptor tyrosine kinase class V signature 1.	EPHA7_HUMAN	186-206	1	- - - D:186-204 - - - - - - - -

Biological Unit 5 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	EPH_LBD	PS51550	Eph receptor ligand-binding domain profile.	EPHA7_HUMAN	32-210	1	- - - - E:32-204 - - - - - - -
2	RECEPTOR_TYR_KIN_V_1	PS00790	Receptor tyrosine kinase class V signature 1.	EPHA7_HUMAN	186-206	1	- - - - E:186-204 - - - - - - -

Biological Unit 6 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	EPH_LBD	PS51550	Eph receptor ligand-binding domain profile.	EPHA7_HUMAN	32-210	1	- - - - - F:32-204 - - - - - -
2	RECEPTOR_TYR_KIN_V_1	PS00790	Receptor tyrosine kinase class V signature 1.	EPHA7_HUMAN	186-206	1	- - - - - F:186-204 - - - - - -

Biological Unit 7 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	EPH_LBD	PS51550	Eph receptor ligand-binding domain profile.	EPHA7_HUMAN	32-210	1	- - - - - - G:32-204 - - - - -
2	RECEPTOR_TYR_KIN_V_1	PS00790	Receptor tyrosine kinase class V signature 1.	EPHA7_HUMAN	186-206	1	- - - - - - G:186-204 - - - - -

Biological Unit 8 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	EPH_LBD	PS51550	Eph receptor ligand-binding domain profile.	EPHA7_HUMAN	32-210	1	- - - - - - - H:32-204 - - - -
2	RECEPTOR_TYR_KIN_V_1	PS00790	Receptor tyrosine kinase class V signature 1.	EPHA7_HUMAN	186-206	1	- - - - - - - H:186-204 - - - -

Biological Unit 9 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	EPH_LBD	PS51550	Eph receptor ligand-binding domain profile.	EPHA7_HUMAN	32-210	1	- - - - - - - - I:32-204 - - -
2	RECEPTOR_TYR_KIN_V_1	PS00790	Receptor tyrosine kinase class V signature 1.	EPHA7_HUMAN	186-206	1	- - - - - - - - I:186-204 - - -

Biological Unit 10 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	EPH_LBD	PS51550	Eph receptor ligand-binding domain profile.	EPHA7_HUMAN	32-210	1	- - - - - - - - - J:32-204 - -
2	RECEPTOR_TYR_KIN_V_1	PS00790	Receptor tyrosine kinase class V signature 1.	EPHA7_HUMAN	186-206	1	- - - - - - - - - J:186-204 - -

Biological Unit 11 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	EPH_LBD	PS51550	Eph receptor ligand-binding domain profile.	EPHA7_HUMAN	32-210	1	- - - - - - - - - - K:32-204 -
2	RECEPTOR_TYR_KIN_V_1	PS00790	Receptor tyrosine kinase class V signature 1.	EPHA7_HUMAN	186-206	1	- - - - - - - - - - K:186-204 -

Biological Unit 12 (2, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	EPH_LBD	PS51550	Eph receptor ligand-binding domain profile.	EPHA7_HUMAN	32-210	1	- - - - - - - - - - - L:32-202
2	RECEPTOR_TYR_KIN_V_1	PS00790	Receptor tyrosine kinase class V signature 1.	EPHA7_HUMAN	186-206	1	- - - - - - - - - - - L:186-202

Asymmetric Unit (3, 36)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1c	ENST00000369303	1c	ENSE00001941413	chr6:94129244-94128963	282	EPHA7_HUMAN	1-33	33	12	A:32-33 B:32-33 C:31-33 D:31-33 E:31-33 F:31-33 G:30-33 H:31-33 I:31-33 J:31-33 K:31-33 L:32-33	2 2 3 3 3 3 4 3 3 3 3 2
1.2	ENST00000369303	2	ENSE00000974737	chr6:94124485-94124421	65	EPHA7_HUMAN	33-54	22	12	A:33-54 (gaps) B:33-54 (gaps) C:33-54 (gaps) D:33-54 E:33-54 (gaps) F:33-54 (gaps) G:33-54 H:33-54 (gaps) I:33-54 (gaps) J:33-54 K:33-54 (gaps) L:33-54 (gaps)	22 22 22 22 22 22 22 22 22 22 22 22
1.3a	ENST00000369303	3a	ENSE00000918734	chr6:94120888-94120219	670	EPHA7_HUMAN	55-278	224	12	A:55-204 (gaps) B:55-204 (gaps) C:55-204 (gaps) D:55-204 (gaps) E:55-204 (gaps) F:55-204 (gaps) G:55-204 (gaps) H:55-204 (gaps) I:55-204 (gaps) J:55-204 (gaps) K:55-204 (gaps) L:55-202 (gaps)	150 150 150 150 150 150 150 150 150 150 150 148
1.4	ENST00000369303	4	ENSE00000974738	chr6:94068129-94067974	156	EPHA7_HUMAN	278-330	53	0	-	-
1.5	ENST00000369303	5	ENSE00000974739	chr6:94066770-94066435	336	EPHA7_HUMAN	330-442	113	0	-	-
1.6	ENST00000369303	6	ENSE00001309196	chr6:93982140-93982016	125	EPHA7_HUMAN	442-483	42	0	-	-
1.7b	ENST00000369303	7b	ENSE00000974741	chr6:93979378-93979195	184	EPHA7_HUMAN	484-545	62	0	-	-
1.8	ENST00000369303	8	ENSE00001084117	chr6:93974420-93974312	109	EPHA7_HUMAN	545-581	37	0	-	-
1.9	ENST00000369303	9	ENSE00000974743	chr6:93973633-93973578	56	EPHA7_HUMAN	581-600	20	0	-	-
1.10	ENST00000369303	10	ENSE00000974744	chr6:93969197-93969072	126	EPHA7_HUMAN	600-642	43	0	-	-
1.11	ENST00000369303	11	ENSE00000974745	chr6:93968002-93967817	186	EPHA7_HUMAN	642-704	63	0	-	-
1.12	ENST00000369303	12	ENSE00000974746	chr6:93967241-93967180	62	EPHA7_HUMAN	704-724	21	0	-	-
1.13	ENST00000369303	13	ENSE00002150360	chr6:93965755-93965546	210	EPHA7_HUMAN	725-794	70	0	-	-
1.14	ENST00000369303	14	ENSE00002154876	chr6:93964514-93964365	150	EPHA7_HUMAN	795-844	50	0	-	-
1.15	ENST00000369303	15	ENSE00000974749	chr6:93956703-93956510	194	EPHA7_HUMAN	845-909	65	0	-	-
1.16	ENST00000369303	16	ENSE00000974750	chr6:93955171-93955016	156	EPHA7_HUMAN	909-961	53	0	-	-
1.17	ENST00000369303	17	ENSE00001449448	chr6:93953258-93949738	3521	EPHA7_HUMAN	961-998	38	0	-	-

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:159
 aligned with EPHA7_HUMAN | Q15375 from UniProtKB/Swiss-Prot  Length:998

    Alignment length:173
                                    41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201   
          EPHA7_HUMAN    32 EVLLLDSKAQQTELEWISSPPNGWEEISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVLGTCKETFNLYYYETDYDTGRNIRENLYVKIDTIAADESFTQGDLGERKMKLNTEVREIGPLSKKGFYLAFQDVGACIALVSVKVYYKK 204
               SCOP domains d3nrua_ A     : automated matches                                                                                                                                             SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...-----..eee.....eeeeee.....eeeeeeee........eeee...ee......eeeeeeeee...............eeeeeeeee........hhhhheeeeeee......---------..eeeeeee......eeeeeeee...eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------V-------------------------------K---------------------------------- SAPs(SNPs)
                PROSITE (1) EPH_LBD  PDB: A:32-204 UniProt: 32-210                                                                                                                                        PROSITE (1)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------RECEPTOR_TYR_KIN_V_ PROSITE (2)
           Transcript 1 (1) 1.---------------------Exon 1.3a  PDB: A:55-204 (gaps) UniProt: 55-278 [INCOMPLETE]                                                                                           Transcript 1 (1)
           Transcript 1 (2) -Exon 1.2              ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1 (2)
                 3nru A  32 EVLLLDSKA-----EWISSPPNGWEEISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVLGTCKETFNLYYYETDYDTGRNIRENLYVKIDTIAADESFT---------KLNTEVREIGPLSKKGFYLAFQDVGACIALVSVKVYYKK 204
                                    |-    |   51        61        71        81        91       101       111       121       131       141       151    |    -    |  171       181       191       201   
                                   40    46                                                                                                           156       166

Chain B from PDB  Type:PROTEIN  Length:158
 aligned with EPHA7_HUMAN | Q15375 from UniProtKB/Swiss-Prot  Length:998

    Alignment length:173
                                    41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201   
          EPHA7_HUMAN    32 EVLLLDSKAQQTELEWISSPPNGWEEISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVLGTCKETFNLYYYETDYDTGRNIRENLYVKIDTIAADESFTQGDLGERKMKLNTEVREIGPLSKKGFYLAFQDVGACIALVSVKVYYKK 204
               SCOP domains d3nrub_ B:    automated matches                                                                                                                                               SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.....---..eee.....eeeeee.....eeeeeeee........eeee...ee......eeeeeeee...........--...eeeeeeeee........hhhhheeeeeee....----------...eeeeeee......eeeeeeee...eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------V-------------------------------K---------------------------------- SAPs(SNPs)
                PROSITE (1) EPH_LBD  PDB: B:32-204 UniProt: 32-210                                                                                                                                        PROSITE (1)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------RECEPTOR_TYR_KIN_V_ PROSITE (2)
           Transcript 1 (1) 1.---------------------Exon 1.3a  PDB: B:55-204 (gaps) UniProt: 55-278 [INCOMPLETE]                                                                                           Transcript 1 (1)
           Transcript 1 (2) -Exon 1.2              ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1 (2)
                 3nru B  32 EVLLLDSKAQQ---EWISSPPNGWEEISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVL--CKETFNLYYYETDYDTGRNIRENLYVKIDTIAADES----------MKLNTEVREIGPLSKKGFYLAFQDVGACIALVSVKVYYKK 204
                                    41|   |   51        61        71        81        91       101       111    |  121       131       141       151  |      -   |   171       181       191       201   
                                     42  46                                                                   116  |                                154        165                                       
                                                                                                                 119

Chain C from PDB  Type:PROTEIN  Length:160
 aligned with EPHA7_HUMAN | Q15375 from UniProtKB/Swiss-Prot  Length:998

    Alignment length:174
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200    
          EPHA7_HUMAN    31 KEVLLLDSKAQQTELEWISSPPNGWEEISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVLGTCKETFNLYYYETDYDTGRNIRENLYVKIDTIAADESFTQGDLGERKMKLNTEVREIGPLSKKGFYLAFQDVGACIALVSVKVYYKK 204
               SCOP domains d3nruc_ C:      automated matches                                                                                                                                              SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeee...-----..eee.....eeeeee.....eeeeeee.........eeee...ee......eeeeeeeee.hhhhh.........eeeeeeeee........hhhhheeeeeee....---------....eeeeeee......eeeeeeee....eeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) -----------------------------------------------------------------------------------------------------------V-------------------------------K---------------------------------- SAPs(SNPs)
                PROSITE (1) -EPH_LBD  PDB: C:32-204 UniProt: 32-210                                                                                                                                        PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------RECEPTOR_TYR_KIN_V_ PROSITE (2)
           Transcript 1 (1) 1.1---------------------Exon 1.3a  PDB: C:55-204 (gaps) UniProt: 55-278 [INCOMPLETE]                                                                                           Transcript 1 (1)
           Transcript 1 (2) --Exon 1.2              ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1 (2)
                 3nru C  31 AEVLLLDSKA-----EWISSPPNGWEEISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVLGTCKETFNLYYYETDYDTGRNIRENLYVKIDTIAADES---------KMKLNTEVREIGPLSKKGFYLAFQDVGACIALVSVKVYYKK 204
                                    40     |  50        60        70        80        90       100       110       120       130       140       150   |     -   |   170       180       190       200    
                                    40    46                                                                                                         154       164

Chain D from PDB  Type:PROTEIN  Length:160
 aligned with EPHA7_HUMAN | Q15375 from UniProtKB/Swiss-Prot  Length:998

    Alignment length:174
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200    
          EPHA7_HUMAN    31 KEVLLLDSKAQQTELEWISSPPNGWEEISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVLGTCKETFNLYYYETDYDTGRNIRENLYVKIDTIAADESFTQGDLGERKMKLNTEVREIGPLSKKGFYLAFQDVGACIALVSVKVYYKK 204
               SCOP domains d3nrud_ D: automated matches                                                                                                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeee..........eee.....eeeeee.....eeeeeee.........eeee...ee......eeeeeeeee.hhhhh...---...eeeeeeeee........hhhhheeeeeee....-----------..eeeeeee......eeeeeeee....eeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) -----------------------------------------------------------------------------------------------------------V-------------------------------K---------------------------------- SAPs(SNPs)
                PROSITE (1) -EPH_LBD  PDB: D:32-204 UniProt: 32-210                                                                                                                                        PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------RECEPTOR_TYR_KIN_V_ PROSITE (2)
           Transcript 1 (1) 1.1---------------------Exon 1.3a  PDB: D:55-204 (gaps) UniProt: 55-278 [INCOMPLETE]                                                                                           Transcript 1 (1)
           Transcript 1 (2) --Exon 1.2  PDB: D:33-54------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1 (2)
                 3nru D  31 AEVLLLDSKAQQTELEWISSPPNGWEEISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGV---CKETFNLYYYETDYDTGRNIRENLYVKIDTIAADES-----------KLNTEVREIGPLSKKGFYLAFQDVGACIALVSVKVYYKK 204
                                    40        50        60        70        80        90       100       110    |  120       130       140       150   |     -     | 170       180       190       200    
                                                                                                              115 119                                154         166

Chain E from PDB  Type:PROTEIN  Length:163
 aligned with EPHA7_HUMAN | Q15375 from UniProtKB/Swiss-Prot  Length:998

    Alignment length:174
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200    
          EPHA7_HUMAN    31 KEVLLLDSKAQQTELEWISSPPNGWEEISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVLGTCKETFNLYYYETDYDTGRNIRENLYVKIDTIAADESFTQGDLGERKMKLNTEVREIGPLSKKGFYLAFQDVGACIALVSVKVYYKK 204
               SCOP domains d3nrue_ E: a   utomated matches                                                                                                                                                SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeee.....---..eee.....eeeeee.....eeeeeeee........eeee...ee......eeeeeeeee.hhhhh...-.....eeeeeeeee........hhhhheeeeeee......-------....eeeeeee......eeeeeeee...eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) -----------------------------------------------------------------------------------------------------------V-------------------------------K---------------------------------- SAPs(SNPs)
                PROSITE (1) -EPH_LBD  PDB: E:32-204 UniProt: 32-210                                                                                                                                        PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------RECEPTOR_TYR_KIN_V_ PROSITE (2)
           Transcript 1 (1) 1.1---------------------Exon 1.3a  PDB: E:55-204 (gaps) UniProt: 55-278 [INCOMPLETE]                                                                                           Transcript 1 (1)
           Transcript 1 (2) --Exon 1.2              ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1 (2)
                 3nru E  31 AEVLLLDSKAQQ---EWISSPPNGWEEISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGV-GTCKETFNLYYYETDYDTGRNIRENLYVKIDTIAADESFT-------KMKLNTEVREIGPLSKKGFYLAFQDVGACIALVSVKVYYKK 204
                                    40 |   |  50        60        70        80        90       100       110    | |120       130       140       150     |   -   |   170       180       190       200    
                                      42  46                                                                  115 |                                    156     164                                        
                                                                                                                117

Chain F from PDB  Type:PROTEIN  Length:156
 aligned with EPHA7_HUMAN | Q15375 from UniProtKB/Swiss-Prot  Length:998

    Alignment length:174
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200    
          EPHA7_HUMAN    31 KEVLLLDSKAQQTELEWISSPPNGWEEISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVLGTCKETFNLYYYETDYDTGRNIRENLYVKIDTIAADESFTQGDLGERKMKLNTEVREIGPLSKKGFYLAFQDVGACIALVSVKVYYKK 204
               SCOP domains d3nruf_ F: a   utomated matches                                                                                                                                                SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeee.....---..eee.....eeeeee.....eeeeeeee........eeee...ee......eeeeeeeee.......---.....eeeeeeeee........hhhhheeeeeee...------------..eeeeeee......eeeeeeee...eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) -----------------------------------------------------------------------------------------------------------V-------------------------------K---------------------------------- SAPs(SNPs)
                PROSITE (1) -EPH_LBD  PDB: F:32-204 UniProt: 32-210                                                                                                                                        PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------RECEPTOR_TYR_KIN_V_ PROSITE (2)
           Transcript 1 (1) 1.1---------------------Exon 1.3a  PDB: F:55-204 (gaps) UniProt: 55-278 [INCOMPLETE]                                                                                           Transcript 1 (1)
           Transcript 1 (2) --Exon 1.2              ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1 (2)
                 3nru F  31 AEVLLLDSKAQQ---EWISSPPNGWEEISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLP---GTCKETFNLYYYETDYDTGRNIRENLYVKIDTIAADE------------KLNTEVREIGPLSKKGFYLAFQDVGACIALVSVKVYYKK 204
                                    40 |   |  50        60        70        80        90       100       110  |   |120       130       140       150  |      -     | 170       180       190       200    
                                      42  46                                                                113 117                                 153          166

Chain G from PDB  Type:PROTEIN  Length:160
 aligned with EPHA7_HUMAN | Q15375 from UniProtKB/Swiss-Prot  Length:998

    Alignment length:175
                                    39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199     
          EPHA7_HUMAN    30 AKEVLLLDSKAQQTELEWISSPPNGWEEISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVLGTCKETFNLYYYETDYDTGRNIRENLYVKIDTIAADESFTQGDLGERKMKLNTEVREIGPLSKKGFYLAFQDVGACIALVSVKVYYKK 204
               SCOP domains d3nrug_ G: automated matches                                                                                                                                                    SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeee.hhh......eee.....eeeeee.....eeeeeeee........eeee...ee......eeeeeeeee.hhhhh..---....eeeeeeeee........hhhhheeeeeee...------------..eeeeeee......eeeeeeee...eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------V-------------------------------K---------------------------------- SAPs(SNPs)
                PROSITE (1) --EPH_LBD  PDB: G:32-204 UniProt: 32-210                                                                                                                                        PROSITE (1)
                PROSITE (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------RECEPTOR_TYR_KIN_V_ PROSITE (2)
           Transcript 1 (1) 1.1c---------------------Exon 1.3a  PDB: G:55-204 (gaps) UniProt: 55-278 [INCOMPLETE]                                                                                           Transcript 1 (1)
           Transcript 1 (2) ---Exon 1.2  PDB: G:33-54------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1 (2)
                 3nru G  30 AAEVLLLDSKAQQTELEWISSPPNGWEEISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPG---TCKETFNLYYYETDYDTGRNIRENLYVKIDTIAADE------------KLNTEVREIGPLSKKGFYLAFQDVGACIALVSVKVYYKK 204
                                    39        49        59        69        79        89        99       109    |  119       129       139       149   |     -      |169       179       189       199     
                                                                                                              114 118                                153          166

Chain H from PDB  Type:PROTEIN  Length:157
 aligned with EPHA7_HUMAN | Q15375 from UniProtKB/Swiss-Prot  Length:998

    Alignment length:174
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200    
          EPHA7_HUMAN    31 KEVLLLDSKAQQTELEWISSPPNGWEEISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVLGTCKETFNLYYYETDYDTGRNIRENLYVKIDTIAADESFTQGDLGERKMKLNTEVREIGPLSKKGFYLAFQDVGACIALVSVKVYYKK 204
               SCOP domains d3nruh_ H:      automated matches                                                                                                                                              SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeee...-----..eee.....eeeeee.....eeeeeee.........eeee...ee......eeeeeeeee.hhhhh--.......eeeeeeeee........hhhhheeeeeee....----------...eeeeeee......eeeeeeee....eeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) -----------------------------------------------------------------------------------------------------------V-------------------------------K---------------------------------- SAPs(SNPs)
                PROSITE (1) -EPH_LBD  PDB: H:32-204 UniProt: 32-210                                                                                                                                        PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------RECEPTOR_TYR_KIN_V_ PROSITE (2)
           Transcript 1 (1) 1.1---------------------Exon 1.3a  PDB: H:55-204 (gaps) UniProt: 55-278 [INCOMPLETE]                                                                                           Transcript 1 (1)
           Transcript 1 (2) --Exon 1.2              ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1 (2)
                 3nru H  31 AEVLLLDSKA-----EWISSPPNGWEEISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSL--VLGTCKETFNLYYYETDYDTGRNIRENLYVKIDTIAADES----------MKLNTEVREIGPLSKKGFYLAFQDVGACIALVSVKVYYKK 204
                                    40     |  50        60        70        80        90       100       110 |  |  120       130       140       150   |     -    |  170       180       190       200    
                                    40    46                                                               112  |                                    154        165                                       
                                                                                                              115

Chain I from PDB  Type:PROTEIN  Length:160
 aligned with EPHA7_HUMAN | Q15375 from UniProtKB/Swiss-Prot  Length:998

    Alignment length:174
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200    
          EPHA7_HUMAN    31 KEVLLLDSKAQQTELEWISSPPNGWEEISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVLGTCKETFNLYYYETDYDTGRNIRENLYVKIDTIAADESFTQGDLGERKMKLNTEVREIGPLSKKGFYLAFQDVGACIALVSVKVYYKK 204
               SCOP domains d3nrui_ I:      automated matches                                                                                                                                              SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeee...-----..eee.....eeeeee.....eeeeeeee........eeee...ee......eeeeeeeee.hhhhh...---...eeeeeeeee........hhhhheeeeeee......------.....eeeeeee......eeeeeeee...eeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) -----------------------------------------------------------------------------------------------------------V-------------------------------K---------------------------------- SAPs(SNPs)
                PROSITE (1) -EPH_LBD  PDB: I:32-204 UniProt: 32-210                                                                                                                                        PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------RECEPTOR_TYR_KIN_V_ PROSITE (2)
           Transcript 1 (1) 1.1---------------------Exon 1.3a  PDB: I:55-204 (gaps) UniProt: 55-278 [INCOMPLETE]                                                                                           Transcript 1 (1)
           Transcript 1 (2) --Exon 1.2              ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1 (2)
                 3nru I  31 AEVLLLDSKA-----EWISSPPNGWEEISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGV---CKETFNLYYYETDYDTGRNIRENLYVKIDTIAADESFT------RKMKLNTEVREIGPLSKKGFYLAFQDVGACIALVSVKVYYKK 204
                                    40     |  50        60        70        80        90       100       110    |  120       130       140       150     |   -  |    170       180       190       200    
                                    40    46                                                                  115 119                                  156    163

Chain J from PDB  Type:PROTEIN  Length:161
 aligned with EPHA7_HUMAN | Q15375 from UniProtKB/Swiss-Prot  Length:998

    Alignment length:174
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200    
          EPHA7_HUMAN    31 KEVLLLDSKAQQTELEWISSPPNGWEEISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVLGTCKETFNLYYYETDYDTGRNIRENLYVKIDTIAADESFTQGDLGERKMKLNTEVREIGPLSKKGFYLAFQDVGACIALVSVKVYYKK 204
               SCOP domains d3nruj_ J: automated matches                                                                                                                                                   SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeee.hhh......eee.....eeeeee.....eeeeeeee........eeee...ee......eeeeeeeee.hhhhh.--......eeeeeeeee........hhhhheeeeeee....-----------..eeeeeee......eeeeeeee...eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) -----------------------------------------------------------------------------------------------------------V-------------------------------K---------------------------------- SAPs(SNPs)
                PROSITE (1) -EPH_LBD  PDB: J:32-204 UniProt: 32-210                                                                                                                                        PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------RECEPTOR_TYR_KIN_V_ PROSITE (2)
           Transcript 1 (1) 1.1---------------------Exon 1.3a  PDB: J:55-204 (gaps) UniProt: 55-278 [INCOMPLETE]                                                                                           Transcript 1 (1)
           Transcript 1 (2) --Exon 1.2  PDB: J:33-54------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1 (2)
                 3nru J  31 AEVLLLDSKAQQTELEWISSPPNGWEEISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLP--LGTCKETFNLYYYETDYDTGRNIRENLYVKIDTIAADES-----------KLNTEVREIGPLSKKGFYLAFQDVGACIALVSVKVYYKK 204
                                    40        50        60        70        80        90       100       110  |  | 120       130       140       150   |     -     | 170       180       190       200    
                                                                                                            113  |                                   154         166                                      
                                                                                                               116

Chain K from PDB  Type:PROTEIN  Length:155
 aligned with EPHA7_HUMAN | Q15375 from UniProtKB/Swiss-Prot  Length:998

    Alignment length:174
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200    
          EPHA7_HUMAN    31 KEVLLLDSKAQQTELEWISSPPNGWEEISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVLGTCKETFNLYYYETDYDTGRNIRENLYVKIDTIAADESFTQGDLGERKMKLNTEVREIGPLSKKGFYLAFQDVGACIALVSVKVYYKK 204
               SCOP domains d3nruk_ K:     automated matches                                                                                                                                               SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeee.hhh----..eee.....eeeeee.....eeeeeeee........eeee...ee......eeeeeeeee.........---...eeeeeeeee........hhhhheeeeeee...------------..eeeeeee......eeeeeeee...eeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) -----------------------------------------------------------------------------------------------------------V-------------------------------K---------------------------------- SAPs(SNPs)
                PROSITE (1) -EPH_LBD  PDB: K:32-204 UniProt: 32-210                                                                                                                                        PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------RECEPTOR_TYR_KIN_V_ PROSITE (2)
           Transcript 1 (1) 1.1---------------------Exon 1.3a  PDB: K:55-204 (gaps) UniProt: 55-278 [INCOMPLETE]                                                                                           Transcript 1 (1)
           Transcript 1 (2) --Exon 1.2              ------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1 (2)
                 3nru K  31 AEVLLLDSKAQ----EWISSPPNGWEEISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGV---CKETFNLYYYETDYDTGRNIRENLYVKIDTIAADE------------KLNTEVREIGPLSKKGFYLAFQDVGACIALVSVKVYYKK 204
                                    40|    |  50        60        70        80        90       100       110    |  120       130       140       150  |      -     | 170       180       190       200    
                                     41   46                                                                  115 119                               153          166

Chain L from PDB  Type:PROTEIN  Length:153
 aligned with EPHA7_HUMAN | Q15375 from UniProtKB/Swiss-Prot  Length:998

    Alignment length:171
                                    41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201 
          EPHA7_HUMAN    32 EVLLLDSKAQQTELEWISSPPNGWEEISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVLGTCKETFNLYYYETDYDTGRNIRENLYVKIDTIAADESFTQGDLGERKMKLNTEVREIGPLSKKGFYLAFQDVGACIALVSVKVYY 202
               SCOP domains d3nrul_ L     : automated matches                                                                                                                                           SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...-----..eee.....eeeeee.....eeeeeee.........eeee...ee......eeeeeeeee.hhhhh..--.....eeeeeeeee.-..---.hhhhheeeeeee......-------....eeeeeee......eeeeeeee....eeeeeeeeee Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------V-------------------------------K-------------------------------- SAPs(SNPs)
                PROSITE (1) EPH_LBD  PDB: L:32-202 UniProt: 32-210                                                                                                                                      PROSITE (1)
                PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------RECEPTOR_TYR_KIN_ PROSITE (2)
           Transcript 1 (1) 1.---------------------Exon 1.3a  PDB: L:55-202 (gaps) UniProt: 55-278 [INCOMPLETE]                                                                                         Transcript 1 (1)
           Transcript 1 (2) -Exon 1.2              ---------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 3nru L  32 EVLLLDSKA-----EWISSPPNGWEEISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPG--GTCKETFNLYYYETD-DT---IRENLYVKIDTIAADESFT-------KMKLNTEVREIGPLSKKGFYLAFQDVGACIALVSVKVYY 202
                                    |-    |   51        61        71        81        91       101       111  |  | 121       131 ||   |141       151    |    -  |    171       181       191       201 
                                   40    46                                                                 114  |           131 || 138               156     164                                      
                                                                                                               117             133|                                                                    
                                                                                                                                134

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All beta proteins (24004)

Fold: Galactose-binding domain-like (314)

Superfamily: Galactose-binding domain-like (314)

Family: Ephrin receptor ligand binding domain (15)

Protein domain: automated matches (9)

Human (Homo sapiens) [TaxId: 9606] (9)

1a	d3nrua_	A:
1b	d3nrud_	D:
1c	d3nrue_	E:
1d	d3nruf_	F:
1e	d3nrug_	G:
1f	d3nruh_	H:
1g	d3nrui_	I:
1h	d3nruj_	J:
1i	d3nruk_	K:
1j	d3nrul_	L:
1k	d3nrub_	B:
1l	d3nruc_	C:

(no "CATH Domain" information available for 3NRU)

(no "Pfam Domain" information available for 3NRU)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F,G,H,I,J,K,L (EPHA7_HUMAN | Q15375)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0005004	GPI-linked ephrin receptor activity	Combining with a GPI-anchored ephrin to initiate a change in cell activity.
	GO:0008046	axon guidance receptor activity	Combining with an extracellular messenger and transmitting the signal from one side of the membrane to the other to results in a change in cellular activity involved in axon guidance.
	GO:0045499	chemorepellent activity	Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a lower concentration of that signal.
	GO:0005003	ephrin receptor activity	Combining with an ephrin to initiate a change in cell activity.
	GO:0046875	ephrin receptor binding	Interacting selectively and non-covalently with an ephrin receptor.
	GO:0016301	kinase activity	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0004672	protein kinase activity	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
	GO:0004713	protein tyrosine kinase activity	Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
	GO:0004714	transmembrane receptor protein tyrosine kinase activity	Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate.
biological process
	GO:0006915	apoptotic process	A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.
	GO:0007420	brain development	The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. Brain development begins with patterning events in the neural tube and ends with the mature structure that is the center of thought and emotion. The brain is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.).
	GO:0048755	branching morphogenesis of a nerve	The process in which the anatomical structures of branches in a nerve are generated and organized. This term refers to an anatomical structure (nerve) not a cell (neuron).
	GO:0048013	ephrin receptor signaling pathway	The series of molecular signals generated as a consequence of an ephrin receptor binding to an ephrin.
	GO:0007275	multicellular organism development	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).
	GO:0050919	negative chemotaxis	The directed movement of a motile cell or organism towards a lower concentration of a chemical.
	GO:0048671	negative regulation of collateral sprouting	Any process that stops, prevents, or reduces the frequency, rate or extent of collateral sprouting.
	GO:0051964	negative regulation of synapse assembly	Any process that stops, prevents, or reduces the frequency, rate or extent of synapse assembly, the aggregation, arrangement and bonding together of a set of components to form a synapse.
	GO:0072178	nephric duct morphogenesis	The process in which the anatomical structures of the nephric duct are generated and organized. A nephric duct is a tube that drains a primitive kidney.
	GO:0007399	nervous system development	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state.
	GO:0018108	peptidyl-tyrosine phosphorylation	The phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine.
	GO:0016310	phosphorylation	The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
	GO:0043065	positive regulation of apoptotic process	Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process.
	GO:0043525	positive regulation of neuron apoptotic process	Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptotic process.
	GO:0001934	positive regulation of protein phosphorylation	Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein.
	GO:0006468	protein phosphorylation	The process of introducing a phosphate group on to a protein.
	GO:0070372	regulation of ERK1 and ERK2 cascade	Any process that modulates the frequency, rate or extent of signal transduction mediated by the ERK1 and ERK2 cascade.
	GO:0022407	regulation of cell-cell adhesion	Any process that modulates the frequency, rate or extent of attachment of a cell to another cell.
	GO:0043281	regulation of cysteine-type endopeptidase activity involved in apoptotic process	Any process that modulates the activity of a cysteine-type endopeptidase involved in apoptosis.
	GO:0050730	regulation of peptidyl-tyrosine phosphorylation	Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine.
	GO:0031952	regulation of protein autophosphorylation	Any process that modulates the frequency, rate or extent of addition of the phosphorylation by a protein of one or more of its own residues.
	GO:0031290	retinal ganglion cell axon guidance	The process in which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues.
	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	A series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell where the receptor possesses tyrosine kinase activity, and ending with regulation of a downstream cellular process, e.g. transcription.
cellular component
	GO:0030425	dendrite	A neuron projection that has a short, tapering, often branched, morphology, receives and integrates signals from other neurons or from sensory stimuli, and conducts a nerve impulse towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.
	GO:0016021	integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0005887	integral component of plasma membrane	The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0031594	neuromuscular junction	The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a change in post-synaptic potential.
	GO:0043025	neuronal cell body	The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
	GO:0005886	plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
	GO:0045211	postsynaptic membrane	A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters cross the synaptic cleft and transmit the signal to the postsynaptic membrane.

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	Cis Peptide Bonds
		Gly A:175 - Pro A:176	[ RasMol ]
		Gly B:175 - Pro B:176	[ RasMol ]
		Gly C:175 - Pro C:176	[ RasMol ]
		Gly D:175 - Pro D:176	[ RasMol ]
		Gly E:175 - Pro E:176	[ RasMol ]
		Gly F:175 - Pro F:176	[ RasMol ]
		Gly G:175 - Pro G:176	[ RasMol ]
		Gly H:117 - Thr H:118	[ RasMol ]
		Gly H:175 - Pro H:176	[ RasMol ]
		Gly I:175 - Pro I:176	[ RasMol ]
		Gly J:175 - Pro J:176	[ RasMol ]
		Gly K:175 - Pro K:176	[ RasMol ]
		Gly L:175 - Pro L:176	[ RasMol ]
		Ser A:50 - Pro A:51	[ RasMol ]
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		Ser I:50 - Pro I:51	[ RasMol ]
		Ser J:50 - Pro J:51	[ RasMol ]
		Ser K:50 - Pro K:51	[ RasMol ]
		Ser L:50 - Pro L:51	[ RasMol ]

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	3nru
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	EPHA7_HUMAN \| Q15375
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UniProtKB/Swiss-Prot
	EPHA7_HUMAN \| Q15375	:	2rei 3dko 3h8m

2rei	KINASE DOMAIN OF HUMAN EPHRIN TYPE-A RECEPTOR 7 (EPHA7)
3dko	COMPLEX BETWEEN THE KINASE DOMAIN OF HUMAN EPHRIN TYPE-A RECEPTOR 7 (EPHA7) AND INHIBITOR ALW-II-49-7
3h8m	SAM DOMAIN OF HUMAN EPHRIN TYPE-A RECEPTOR 7 (EPHA7)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 12)

Sites (12, 12)

SS Bonds (23, 23)

Cis Peptide Bonds (25, 25)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (2, 24)

PROSITE Motifs (2, 24)

Exons (3, 36)

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SCOP Domains (1, 12)

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Gene Ontology (44, 44)

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