Chain A from PDB Type:PROTEIN Length:73
aligned with HMGD_DROME | Q05783 from UniProtKB/Swiss-Prot Length:112
Alignment length:73
11 21 31 41 51 61 71
HMGD_DROME 2 SDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKDDYDRAVKEFEANG 74
SCOP domains d3nm9a_ A: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---HMG_BOX_2 PDB: A:5-71 UniProt: 5-71 --- PROSITE
Transcript ------------------------------------------------------------------------- Transcript
3nm9 A 2 SDKPKRPLSAYALWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKDDYDRAVKEFEANG 74
11 21 31 41 51 61 71
Chain B from PDB Type:DNA Length:10
3nm9 B 2 GCGATATCGC 11
11
Chain C from PDB Type:DNA Length:10
3nm9 C 2 GCGATATCGC 11
11
Chain D from PDB Type:PROTEIN Length:73
aligned with HMGD_DROME | Q05783 from UniProtKB/Swiss-Prot Length:112
Alignment length:73
11 21 31 41 51 61 71
HMGD_DROME 2 SDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKDDYDRAVKEFEANG 74
SCOP domains d3nm9d_ D: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---HMG_BOX_2 PDB: D:5-71 UniProt: 5-71 --- PROSITE
Transcript ------------------------------------------------------------------------- Transcript
3nm9 D 2 SDKPKRPLSAYALWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKDDYDRAVKEFEANG 74
11 21 31 41 51 61 71
Chain E from PDB Type:DNA Length:10
3nm9 E 2 GCGATATCGC 11
11
Chain F from PDB Type:DNA Length:10
3nm9 F 2 GCGATATCGC 11
11
Chain G from PDB Type:PROTEIN Length:73
aligned with HMGD_DROME | Q05783 from UniProtKB/Swiss-Prot Length:112
Alignment length:73
11 21 31 41 51 61 71
HMGD_DROME 2 SDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKDDYDRAVKEFEANG 74
SCOP domains d3nm9g_ G: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---HMG_BOX_2 PDB: G:5-71 UniProt: 5-71 --- PROSITE
Transcript ------------------------------------------------------------------------- Transcript
3nm9 G 2 SDKPKRPLSAYALWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKDDYDRAVKEFEANG 74
11 21 31 41 51 61 71
Chain H from PDB Type:DNA Length:10
3nm9 H 2 GCGATATCGC 11
11
Chain I from PDB Type:DNA Length:10
3nm9 I 2 GCGATATCGC 11
11
Chain J from PDB Type:PROTEIN Length:73
aligned with HMGD_DROME | Q05783 from UniProtKB/Swiss-Prot Length:112
Alignment length:73
11 21 31 41 51 61 71
HMGD_DROME 2 SDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKDDYDRAVKEFEANG 74
SCOP domains d3nm9j_ J: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........hhhhhhhh.hhhhhhhhh...hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---HMG_BOX_2 PDB: J:5-71 UniProt: 5-71 --- PROSITE
Transcript ------------------------------------------------------------------------- Transcript
3nm9 J 2 SDKPKRPLSAYALWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKDDYDRAVKEFEANG 74
11 21 31 41 51 61 71
Chain K from PDB Type:DNA Length:10
3nm9 K 2 GCGATATCGC 11
11
Chain L from PDB Type:DNA Length:11
3nm9 L 1 GGCGATATCGC 11
10
Chain M from PDB Type:PROTEIN Length:73
aligned with HMGD_DROME | Q05783 from UniProtKB/Swiss-Prot Length:112
Alignment length:73
11 21 31 41 51 61 71
HMGD_DROME 2 SDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKDDYDRAVKEFEANG 74
SCOP domains d3nm9m_ M: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------- Pfam domains
Sec.struct. author ........hhhhhhhh.hhhhhhhhh.....hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---HMG_BOX_2 PDB: M:5-71 UniProt: 5-71 --- PROSITE
Transcript ------------------------------------------------------------------------- Transcript
3nm9 M 2 SDKPKRPLSAYALWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKDDYDRAVKEFEANG 74
11 21 31 41 51 61 71
Chain N from PDB Type:DNA Length:10
3nm9 N 2 GCGATATCGC 11
11
Chain O from PDB Type:DNA Length:10
3nm9 O 2 GCGATATCGC 11
11
Chain P from PDB Type:PROTEIN Length:73
aligned with HMGD_DROME | Q05783 from UniProtKB/Swiss-Prot Length:112
Alignment length:73
11 21 31 41 51 61 71
HMGD_DROME 2 SDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKDDYDRAVKEFEANG 74
SCOP domains d3nm9p_ P: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------- CATH domains
Pfam domains (1) ---HMG_box-3nm9P01 P:5-71 --- Pfam domains (1)
Pfam domains (2) ---HMG_box-3nm9P02 P:5-71 --- Pfam domains (2)
Pfam domains (3) ---HMG_box-3nm9P03 P:5-71 --- Pfam domains (3)
Pfam domains (4) ---HMG_box-3nm9P04 P:5-71 --- Pfam domains (4)
Pfam domains (5) ---HMG_box-3nm9P05 P:5-71 --- Pfam domains (5)
Pfam domains (6) ---HMG_box-3nm9P06 P:5-71 --- Pfam domains (6)
Sec.struct. author ........hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---HMG_BOX_2 PDB: P:5-71 UniProt: 5-71 --- PROSITE
Transcript ------------------------------------------------------------------------- Transcript
3nm9 P 2 SDKPKRPLSAYALWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKDDYDRAVKEFEANG 74
11 21 31 41 51 61 71
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(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |