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(-) Description

Title :  CRYSTAL STRUCTURE OF MOUSE AUTOTAXIN IN COMPLEX WITH 22:6-LPA
 
Authors :  H. Nishimasu, R. Ishitani, E. Mihara, J. Takagi, J. Aoki, O. Nureki
Date :  20 Jun 10  (Deposition) - 19 Jan 11  (Release) - 19 Feb 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym./Biol. Unit :  A
Keywords :  Lysophospholipase D, Autotaxin, Enpp2, Lysophosphatidic Acid, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. Nishimasu, S. Okudaira, K. Hama, E. Mihara, N. Dohmae, A. Inoue, R. Ishitani, J. Takagi, J. Aoki, O. Nureki
Crystal Structure Of Autotaxin And Insight Into Gpcr Activation By Lipid Mediators
Nat. Struct. Mol. Biol. V. 18 205 2011
PubMed-ID: 21240269  |  Reference-DOI: 10.1038/NSMB.1998

(-) Compounds

Molecule 1 - ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE FAMILY MEMBER 2
    Chains: A
    EC Number: 3.1.4.39
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: HEK293S GNT1-
    Expression System Common: HUMAN
    Expression System Plasmid: PCD-CW
    Expression System Taxid: 9606
    Expression System Vector Type: PLASMID
    Gene: ENPP2, NPPS2, PDNP2
    Organism Common: MOUSE
    Organism Scientific: MUS MUSCULUS
    Organism Taxid: 10090
    Synonym: ATX, E-NPP 2, AUTOTAXIN, EXTRACELLULAR LYSOPHOSPHOLIPASE D, LYSOPLD

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (10, 40)

Asymmetric/Biological Unit (10, 40)
No.NameCountTypeFull Name
1BMA1Ligand/IonBETA-D-MANNOSE
2CA1Ligand/IonCALCIUM ION
3EDO21Ligand/Ion1,2-ETHANEDIOL
4K1Ligand/IonPOTASSIUM ION
5MAN3Ligand/IonALPHA-D-MANNOSE
6NA1Ligand/IonSODIUM ION
7NAG6Ligand/IonN-ACETYL-D-GLUCOSAMINE
8NKR2Ligand/Ion(2R)-2-HYDROXY-3-(PHOSPHONOOXY)PROPYL (4Z,7E,10E,13Z,16Z,19Z)-DOCOSA-4,7,10,13,16,19-HEXAENOATE
9SCN2Ligand/IonTHIOCYANATE ION
10ZN2Ligand/IonZINC ION

(-) Sites  (40, 40)

Asymmetric Unit (40, 40)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETRP A:51 , ASN A:53 , SER A:55 , NAG A:899BINDING SITE FOR RESIDUE NAG A 898
02AC2SOFTWARENAG A:898BINDING SITE FOR RESIDUE NAG A 899
03AC3SOFTWAREHOH A:19 , LEU A:220 , PRO A:522 , ASN A:524 , LEU A:741 , HIS A:827 , HOH A:875 , HOH A:896 , NAG A:901 , HOH A:977 , HOH A:981 , HOH A:1064 , HOH A:1098BINDING SITE FOR RESIDUE NAG A 900
04AC4SOFTWARESER A:224 , HOH A:886 , NAG A:900 , BMA A:902 , MAN A:903 , MAN A:905 , HOH A:1136 , HOH A:1476BINDING SITE FOR RESIDUE NAG A 901
05AC5SOFTWARENAG A:901 , MAN A:903 , HOH A:1245BINDING SITE FOR RESIDUE BMA A 902
06AC6SOFTWARENAG A:901 , BMA A:902 , MAN A:904 , HOH A:1375 , HOH A:1459BINDING SITE FOR RESIDUE MAN A 903
07AC7SOFTWARESER A:224 , GLY A:255 , MAN A:903 , MAN A:905 , NKR A:1007 , EDO A:1030 , HOH A:1366 , HOH A:1446BINDING SITE FOR RESIDUE MAN A 904
08AC8SOFTWAREHOH A:11 , GLU A:223 , SER A:224 , ASN A:436 , ASN A:437 , HOH A:886 , NAG A:901 , MAN A:904 , HOH A:1050 , HOH A:1079 , HOH A:1359BINDING SITE FOR RESIDUE MAN A 905
09AC9SOFTWARELEU A:376 , THR A:377 , ASN A:410 , NAG A:908 , HOH A:947 , HOH A:1408BINDING SITE FOR RESIDUE NAG A 907
10BC1SOFTWARENAG A:907 , HOH A:1329 , HOH A:1407BINDING SITE FOR RESIDUE NAG A 908
11BC2SOFTWAREASP A:171 , THR A:209 , ASP A:358 , HIS A:359BINDING SITE FOR RESIDUE ZN A 1001
12BC3SOFTWAREASP A:311 , HIS A:315 , HIS A:474 , NKR A:1006BINDING SITE FOR RESIDUE ZN A 1002
13BC4SOFTWAREASP A:735 , ASN A:737 , ASN A:739 , LEU A:741 , ASP A:743 , HOH A:1339BINDING SITE FOR RESIDUE CA A 1003
14BC5SOFTWAREASN A:797 , SER A:800 , SER A:803 , HOH A:1080 , HOH A:1372BINDING SITE FOR RESIDUE NA A 1004
15BC6SOFTWARETYR A:665 , ASP A:668 , MET A:671BINDING SITE FOR RESIDUE K A 1005
16BC7SOFTWARESER A:169 , THR A:209 , PHE A:210 , LEU A:213 , ASN A:230 , LEU A:243 , PHE A:273 , TYR A:306 , ASP A:311 , HIS A:315 , HIS A:474 , HOH A:1000 , ZN A:1002 , HOH A:1273 , HOH A:1274BINDING SITE FOR RESIDUE NKR A 1006
17BC8SOFTWARETYR A:214 , PHE A:249 , HIS A:251 , TRP A:254 , GLY A:255 , MAN A:904BINDING SITE FOR RESIDUE NKR A 1007
18BC9SOFTWAREPRO A:206 , LYS A:208 , GLY A:229 , ASN A:230 , SER A:231 , VAL A:385 , ARG A:391BINDING SITE FOR RESIDUE SCN A 1008
19CC1SOFTWAREMET A:232 , ARG A:393BINDING SITE FOR RESIDUE SCN A 1009
20CC2SOFTWAREPRO A:544 , ARG A:823 , GLU A:826 , ASP A:832 , TYR A:841 , LEU A:845 , LYS A:848BINDING SITE FOR RESIDUE EDO A 1010
21CC3SOFTWAREGLU A:150 , ILE A:151 , CYS A:194 , GLY A:195 , TYR A:490 , GLY A:491 , LYS A:495 , TYR A:496 , HOH A:1073BINDING SITE FOR RESIDUE EDO A 1011
22CC4SOFTWAREGLY A:674 , PHE A:675 , PRO A:678 , TYR A:680 , TRP A:708 , GLN A:712 , HOH A:992BINDING SITE FOR RESIDUE EDO A 1012
23CC5SOFTWARETYR A:601 , PHE A:621 , PHE A:734 , ARG A:742 , ASP A:743 , HOH A:871 , HOH A:922BINDING SITE FOR RESIDUE EDO A 1013
24CC6SOFTWAREHIS A:197 , LYS A:499BINDING SITE FOR RESIDUE EDO A 1014
25CC7SOFTWARETYR A:701 , TYR A:736 , GLN A:750 , PRO A:760 , THR A:761 , HIS A:793BINDING SITE FOR RESIDUE EDO A 1015
26CC8SOFTWAREHOH A:24 , LEU A:446 , GLU A:448 , HOH A:1189 , HOH A:1443BINDING SITE FOR RESIDUE EDO A 1016
27CC9SOFTWAREHIS A:427 , THR A:761 , HIS A:793 , HOH A:978BINDING SITE FOR RESIDUE EDO A 1017
28DC1SOFTWAREPRO A:520 , PRO A:522 , ASN A:523 , HOH A:890 , HOH A:1209 , HOH A:1276BINDING SITE FOR RESIDUE EDO A 1018
29DC2SOFTWAREILE A:620 , PHE A:621 , GLU A:745 , TYR A:751 , SER A:756BINDING SITE FOR RESIDUE EDO A 1019
30DC3SOFTWARELEU A:784 , SER A:785 , VAL A:786 , LEU A:847 , TYR A:850 , HOH A:1082BINDING SITE FOR RESIDUE EDO A 1020
31DC4SOFTWARELEU A:600 , ARG A:742 , GLY A:830 , HOH A:1048BINDING SITE FOR RESIDUE EDO A 1021
32DC5SOFTWAREASN A:374 , LYS A:415 , HOH A:987BINDING SITE FOR RESIDUE EDO A 1022
33DC6SOFTWAREHIS A:281 , SER A:307 , ILE A:331 , THR A:334 , HOH A:1259BINDING SITE FOR RESIDUE EDO A 1023
34DC7SOFTWAREARG A:835 , LYS A:836 , HOH A:887 , HOH A:1474BINDING SITE FOR RESIDUE EDO A 1024
35DC8SOFTWAREPRO A:702 , ALA A:703 , ARG A:706 , HOH A:974 , HOH A:976BINDING SITE FOR RESIDUE EDO A 1025
36DC9SOFTWAREPRO A:783 , LEU A:784 , ARG A:839 , GLU A:843BINDING SITE FOR RESIDUE EDO A 1026
37EC1SOFTWARELYS A:495 , TYR A:496 , ARG A:535 , HOH A:1330BINDING SITE FOR RESIDUE EDO A 1027
38EC2SOFTWAREPHE A:704 , PRO A:792 , ARG A:794 , ASP A:796 , ASN A:797 , HOH A:1224BINDING SITE FOR RESIDUE EDO A 1028
39EC3SOFTWAREHOH A:24 , GLU A:799 , SER A:800 , GLU A:813 , HOH A:985 , HOH A:1063BINDING SITE FOR RESIDUE EDO A 1029
40EC4SOFTWAREGLY A:226 , ASN A:437 , ARG A:439 , MAN A:904 , HOH A:1446BINDING SITE FOR RESIDUE EDO A 1030

(-) SS Bonds  (15, 15)

Asymmetric/Biological Unit
No.Residues
1A:58 -A:75
2A:62 -A:93
3A:73 -A:86
4A:79 -A:85
5A:102 -A:119
6A:107 -A:137
7A:117 -A:130
8A:123 -A:129
9A:148 -A:194
10A:156 -A:350
11A:366 -A:468
12A:413 -A:801
13A:566 -A:662
14A:568 -A:647
15A:770 -A:780

(-) Cis Peptide Bonds  (3, 3)

Asymmetric/Biological Unit
No.Residues
1Pro A:70 -Pro A:71
2Tyr A:205 -Pro A:206
3Gln A:309 -Pro A:310

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3NKR)

(-) PROSITE Motifs  (2, 4)

Asymmetric/Biological Unit (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1SMB_2PS50958 Somatomedin B (SMB) domain profile.ENPP2_MOUSE54-97
98-142		  2A:54-97
A:98-142
2SMB_1PS00524 Somatomedin B domain (SMB) signature.ENPP2_MOUSE73-93
117-137		  2A:73-93
A:117-137

(-) Exons   (0, 0)

(no "Exon" information available for 3NKR)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:779
 aligned with ENPP2_MOUSE | Q9R1E6 from UniProtKB/Swiss-Prot  Length:862

    Alignment length:809
                                    60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760       770       780       790       800       810       820       830       840       850         
          ENPP2_MOUSE    51 WTNTSGSCKGRCFELQEVGPPDCRCDNLCKSYSSCCHDFDELCLKTARGWECTKDRCGEVRNEENACHCSEDCLSRGDCCTNYQVVCKGESHWVDDDCEEIRVPECPAGFVRPPLIIFSVDGFRASYMKKGSKVMPNIEKLRSCGTHAPYMRPVYPTKTFPNLYTLATGLYPESHGIVGNSMYDPVFDATFHLRGREKFNHRWWGGQPLWITATKQGVRAGTFFWSVSIPHERRILTILQWLSLPDNERPSVYAFYSEQPDFSGHKYGPFGPEMTNPLREIDKTVGQLMDGLKQLKLHRCVNVIFVGDHGMEDVTCDRTEFLSNYLTNVDDITLVPGTLGRIRPKIPNNLKYDPKAIIANLTCKKPDQHFKPYMKQHLPKRLHYANNRRIEDLHLLVERRWHVARKPLDVYKKPSGKCFFQGDHGFDNKVNSMQTVFVGYGPTFKYRTKVPPFENIELYNVMCDLLGLKPAPNNGTHGSLNHLLRTNTFRPTLPEEVSRPNYPGIMYLQSDFDLGCTCDDKVEPKNKLEELNKRLHTKGSTEERHLLYGRPAVLYRTSYDILYHTDFESGYSEIFLMPLWTSYTISKQAEVSSIPEHLTNCVRPDVRVSPGFSQNCLAYKNDKQMSYGFLFPPYLSSSPEAKYDAFLVTNMVPMYPAFKRVWTYFQRVLVKKYASERNGVNVISGPIFDYNYNGLRDIEDEIKQYVEGSSIPVPTHYYSIITSCLDFTQPADKCDGPLSVSSFILPHRPDNDESCNSSEDESKWVEELMKMHTARVRDIEHLTGLDFYRKTSRSYSEILTLKTYLHTYE 859
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ------------------------------------------------Somatomedin_B-3nkrA04 A:99-142              ----------------------------------------------------------------------------------------------------------------------------------------Phosphodiest-3nkrA01 A:279-477                                                                                                                                                                         --------------------------------------------------------------------------------------------                     ----------------------Endonuclease_NS-3nkrA03 A:609-840                                                                                                                                                                                                       --------------- Pfam domains (1)
           Pfam domains (2) ------------------------------------------------Somatomedin_B-3nkrA05 A:99-142              ----------------------------------------------------------------------------------------------------------------------------------------Phosphodiest-3nkrA02 A:279-477                                                                                                                                                                         --------------------------------------------------------------------------------------------                     ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (2)
         Sec.struct. author .....................................hhhhhhh........hhhhh..............hhhhhh....hhhhhhhh..hhhhh..................eeeeeee..hhhhhhhhhhhhhhhhhhhhhhee...ee.....hhhhhhhhhhhh.hhhhhh....eeee....eeee...hhhhhhhhh...hhhhhhhhh.............hhhhhhhhhhhhhh........eeeeeeeeehhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhh......eeeeee....ee.....eee.hhh..hhh.eeee...eeeeee........hhhhhhhhhh.......eeeee.hhhhhhhh.........eeeee....eee....---------....ee......hhhhh..eeee.......ee...ee..hhhhhhhhhh.............hhhhh.......................hhhhh.......---------------------hhhhhh.....ee.....eeeee....eeeee....eeeeeeeee.........hhhhh...............hhhhhhhh...eeee..hhhhh.hhhhhh...hhh.eeeehhhhhhhhhhhhhhhhhhhhhhhh.eeeeeeee..........hhhhh.............eeeeeeeee.....hhhhh...eeeeeeeee.............hhhhhhhhhhhhheehhhhhhhhhhee.......hhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ---SMB_2  PDB: A:54-97 UniProt: 54-97          SMB_2  PDB: A:98-142 UniProt: 98-142         --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
                PROSITE (2) ----------------------SMB_1  PDB: A:73-93  -----------------------SMB_1  PDB: A:117-137-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3nkr A  51 WTNTSGSCKGRCFELQEVGPPDCRCDNLCKSYSSCCHDFDELCLKTARGWECTKDRCGEVRNEENACHCSEDCLSRGDCCTNYQVVCKGESHWVDDDCEEIRVPECPAGFVRPPLIIFSVDGFRASYMKKGSKVMPNIEKLRSCGTHAPYMRPVYPTKTFPNLYTLATGLYPESHGIVGNSMYDPVFDATFHLRGREKFNHRWWGGQPLWITATKQGVRAGTFFWSVSIPHERRILTILQWLSLPDNERPSVYAFYSEQPDFSGHKYGPFGPEMTNPLREIDKTVGQLMDGLKQLKLHRCVNVIFVGDHGMEDVTCDRTEFLSNYLTNVDDITLVPGTLGRIRPKIPNNLKYDPKAIIANLTCKKPDQHFKPYMKQHLPKRLHYANNRRIEDLHLLVERRWHVARKPL---------CFFQGDHGFDNKVNSMQTVFVGYGPTFKYRTKVPPFENIELYNVMCDLLGLKPAPNNGTHGSLNHLLRTNTFRPTLPEEVSRPNYPGIMYLQSDFDLGCTCD---------------------TEERHLLYGRPAVLYRTSYDILYHTDFESGYSEIFLMPLWTSYTISKQAEVSSIPEHLTNCVRPDVRVSPGFSQNCLAYKNDKQMSYGFLFPPYLSSSPEAKYDAFLVTNMVPMYPAFKRVWTYFQRVLVKKYASERNGVNVISGPIFDYNYNGLRDIEDEIKQYVEGSSIPVPTHYYSIITSCLDFTQPADKCDGPLSVSSFILPHRPDNDESCNSSEDESKWVEELMKMHTARVRDIEHLTGLDFYRKTSRSYSEILTLKTYLHTYE 855
                                    60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       | -       470       480       490       500       510       520       530       540       550       560        |-         -         -|      596       606       616       626       636       646       656       666       676       686       696       706       716       726       736       746       756       766       776       786       796       806       816       826       836       846         
                                                                                                                                                                                                                                                                                                                                                                                                                                                 458       468                                                                                                  569                   587
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3NKR)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3NKR)

(-) Pfam Domains  (3, 5)

Asymmetric/Biological Unit
(-)
Clan: Alk_phosphatase (47)
(-)
Clan: His-Me_finger (38)
(-)
Clan: no clan defined [family: Somatomedin_B] (13)

(-) Gene Ontology  (29, 29)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (ENPP2_MOUSE | Q9R1E6)
molecular function
    GO:0047391    alkylglycerophosphoethanolamine phosphodiesterase activity    Catalysis of the reaction: H2O + 1-alkyl-sn-glycero-3-phosphoethanolamine = ethanolamine + 1-alkyl-sn-glycerol 3-phosphate.
    GO:0005509    calcium ion binding    Interacting selectively and non-covalently with calcium ions (Ca2+).
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0004622    lysophospholipase activity    Catalysis of the reaction: 2-lysophosphatidylcholine + H2O = glycerophosphocholine + a carboxylate.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0003676    nucleic acid binding    Interacting selectively and non-covalently with any nucleic acid.
    GO:0004551    nucleotide diphosphatase activity    Catalysis of the reaction: a dinucleotide + H2O = 2 mononucleotides.
    GO:0004528    phosphodiesterase I activity    Catalysis of the sequential hydrolytic removal of 5'-nucleotides from the 3'-hydroxy termini of 3'-hydroxy-terminated oligonucleotides.
    GO:0030247    polysaccharide binding    Interacting selectively and non-covalently with any polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.
    GO:0005044    scavenger receptor activity    Combining with any modified low-density lipoprotein (LDL) or other polyanionic ligand and delivering the ligand into the cell via endocytosis. Ligands include acetylated and oxidized LDL, Gram-positive and Gram-negative bacteria, apoptotic cells, amyloid-beta fibrils, and advanced glycation end products (AGEs).
    GO:0008270    zinc ion binding    Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
    GO:0006935    chemotaxis    The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).
    GO:0006955    immune response    Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat.
    GO:0016042    lipid catabolic process    The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
    GO:0006629    lipid metabolic process    The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0090305    nucleic acid phosphodiester bond hydrolysis    The nucleic acid metabolic process in which the phosphodiester bonds between nucleotides are cleaved by hydrolysis.
    GO:0034638    phosphatidylcholine catabolic process    The chemical reactions and pathways resulting in the breakdown of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline.
    GO:0009395    phospholipid catabolic process    The chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester.
    GO:0010634    positive regulation of epithelial cell migration    Any process that activates or increases the frequency, rate or extent of epithelial cell migration.
    GO:2000394    positive regulation of lamellipodium morphogenesis    Any process that activates or increases the frequency, rate or extent of lamellipodium morphogenesis.
    GO:0050731    positive regulation of peptidyl-tyrosine phosphorylation    Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine.
    GO:0006898    receptor-mediated endocytosis    An endocytosis process in which cell surface receptors ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles.
    GO:0045765    regulation of angiogenesis    Any process that modulates the frequency, rate or extent of angiogenesis.
    GO:0030334    regulation of cell migration    Any process that modulates the frequency, rate or extent of cell migration.
cellular component
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0005615    extracellular space    That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
    GO:0005887    integral component of plasma membrane    The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

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  3nkr
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  ENPP2_MOUSE | Q9R1E6
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  3.1.4.39
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ENPP2_MOUSE | Q9R1E6: 3nkm 3nkn 3nko 3nkp 3nkq 3wav 3waw 3wax 3way 4gtw 4gtx 4gty 4gtz 5hrt 5inh 5jvg 5lia

(-) Related Entries Specified in the PDB File

3nkm 3nkn 3nko 3nkp 3nkq